Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe07g0246 | ATGGAGAGGAGTCTTGGAGTGTTGTTTTTTCTTCAGTTCTTTTTACTATCTTCTTCTTCTGCACCCTTTTCCAAGCCTGCCTCTAATGGCATTGATTGGTGGTGTACAAAAACCACATACCCTGAAACCTGCAAGTATTTCTTCAGCCATGGCAGCAAGGCTGCTCCCAAAGATATGTCTGAGTTCAAGAAAATGGTGATCCAATTTGCCATGGAGAGAGCTCTTACTGCCGAGACCAACACTAAGGGTGTCGGTACCAAGTGCCGAAATAAGAAGGAAAAGGCTGCTTGGGCTGATTGTTTGGAGCTCTACCAAAACACCATCCTGCAGCTCAACAACACTCTAGATTCCTCTACAAAATGTACCGAGTTTGATATCCATACCTGGCTCAGTACTGCCCTAACCAACCTTGAAACGTGCCGCACCGGGTTTGCTGAGCTTAATGTTTCGGACTATGTATTGCCACTGATCATGTCGAACAATGTCACAAAGCTGATAAGCAACAGCTTGGCAGTTAACAATGCTTCAGCTTGGCCGGGGAAAGAGACATATAAAAAGGGTTTTCCAAGTTGGCTTTCAGGTGGTGACAGGAAGCTACTGCAGTCATCTTCAACAAAGGCGGACCTTGTGGTGGCTCAGGACGGATCTGGTAACTATAAGACGGTTGGAGTGGCTCTAGAGGAAGCTGCAAAAAGGAAGACAGATGGGAGATTTGTTATACAAGTAAAGAGGGGGATTTACGAAGAAAACCTTGAGATTGGAAGTAAGATGAAGAATATAATGCTCGTTGGAGATGGAATGAGGTTTACCTTCATTACTGGTAATAGAAGTGTTGTAGGAGGCTCCACCACTTTCAATTCTGCTACTGTTGCGGTGACTGGTGAAGGATTTATAGCTCAAGGCATCACATTCCGTAACACTGCTGGTCCTGAAAACCATCAAGCAGTTGCTCTTCGATCGGGCGCAGATCTTTCTGTCTTCTACCGCTGTGCCTTTGAAGGGTATCAGGACACCCTCTATGTTCATTCGCAAAGACAATTCTATAAGGAGTGTTATGTTTACGGCACGGTAGATTTTATATTCGGCAATGCTGCAGTTGTTCTACAGAACTGCATGATTTATGCAAGGCGGCCAATGAATGGTCAGAAGAATACAGTCACTGCTCAAGGACGGACTGATCCAAATCAAAATACTGGCATTTCAATTCACAACTCGCGAGTCATGGCCACGGATGACCTAAAACCAGTGGAGAGCACAGTAAAAACCTACTTAGGAAGGCCATGGAAGGAGTACTCTCGAACAGTTTTCATGAAAACTTACCTAGATAGTTTGATTGATCCAGCAGGTTGGTTGGAGTGGGATGGTGACTTTGCACTGAATACTTTATATTATGGAGAGTATATGAATATTGGTCCTCGTTCATCAACTAGCCAGAGAGTGAACTGGAAAGGTTACCATGTTATAAGCAATTCAACAGAGGCATCGGAGTTCACTGTCCAAAATTTCATTGCAGGGCAATCATGGTTGCCAGGCACACAGGTCCCATTTACTCCTGGACTCTAG | 1563 | 44.59 | MERSLGVLFFLQFFLLSSSSAPFSKPASNGIDWWCTKTTYPETCKYFFSHGSKAAPKDMSEFKKMVIQFAMERALTAETNTKGVGTKCRNKKEKAAWADCLELYQNTILQLNNTLDSSTKCTEFDIHTWLSTALTNLETCRTGFAELNVSDYVLPLIMSNNVTKLISNSLAVNNASAWPGKETYKKGFPSWLSGGDRKLLQSSSTKADLVVAQDGSGNYKTVGVALEEAAKRKTDGRFVIQVKRGIYEENLEIGSKMKNIMLVGDGMRFTFITGNRSVVGGSTTFNSATVAVTGEGFIAQGITFRNTAGPENHQAVALRSGADLSVFYRCAFEGYQDTLYVHSQRQFYKECYVYGTVDFIFGNAAVVLQNCMIYARRPMNGQKNTVTAQGRTDPNQNTGISIHNSRVMATDDLKPVESTVKTYLGRPWKEYSRTVFMKTYLDSLIDPAGWLEWDGDFALNTLYYGEYMNIGPRSSTSQRVNWKGYHVISNSTEASEFTVQNFIAGQSWLPGTQVPFTPGL | 520 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 2340813 | 2342874 | + | Hsped.07g02460.1 | Hepe07g0246 | 573641 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe07g0246 | 520 | Pfam | Pectinesterase | 208 | 505 | IPR000070 | GO:0030599(InterPro)|GO:0042545(InterPro) | |
Hepe07g0246 | 520 | SUPERFAMILY | Plant invertase/pectin methylesterase inhibitor | 29 | 174 | IPR035513 | - | |
Hepe07g0246 | 520 | Gene3D | Invertase/pectin methylesterase inhibitor family protein | 27 | 175 | IPR035513 | - | |
Hepe07g0246 | 520 | PANTHER | PECTINESTERASE | 18 | 510 | - | GO:0030599(PANTHER)|GO:0046910(PANTHER) | |
Hepe07g0246 | 520 | Gene3D | - | 202 | 520 | IPR012334 | - | |
Hepe07g0246 | 520 | NCBIfam | pectinesterase inhibitor domain | 1 | 174 | IPR006501 | GO:0004857(InterPro) | |
Hepe07g0246 | 520 | ProSitePatterns | Pectinesterase signature 2. | 353 | 362 | IPR033131 | - | |
Hepe07g0246 | 520 | FunFam | Pectinesterase | 202 | 520 | - | - | |
Hepe07g0246 | 520 | Pfam | Plant invertase/pectin methylesterase inhibitor | 31 | 172 | IPR006501 | GO:0004857(InterPro) | |
Hepe07g0246 | 520 | SMART | PMEI_2 | 26 | 172 | IPR006501 | GO:0004857(InterPro) | |
Hepe07g0246 | 520 | SMART | complete | 242 | 408 | IPR006633 | - | |
Hepe07g0246 | 520 | CDD | PMEI-like_3 | 33 | 175 | - | - | |
Hepe07g0246 | 520 | SUPERFAMILY | Pectin lyase-like | 204 | 519 | IPR011050 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe07g0246 | Hepe-Chr7:2340813 | Hepe07g1125 | Hepe-Chr7:20386608 | 8.75e-190 | dispersed | |
Hepe08g1614 | Hepe-Chr8:23819156 | Hepe07g0246 | Hepe-Chr7:2340813 | 4.18e-76 | dispersed | |
Hepe04g1782 | Hepe-Chr4:72746132 | Hepe07g0246 | Hepe-Chr7:2340813 | 1.66e-150 | transposed | |
Hepe06g1103 | Hepe-Chr6:59630630 | Hepe07g0246 | Hepe-Chr7:2340813 | 2.04e-13 | transposed | |
Hepe06g1367 | Hepe-Chr6:63939918 | Hepe07g0246 | Hepe-Chr7:2340813 | 2.89e-257 | transposed | |
Hepe05g1854 | Hepe-Chr5:68844978 | Hepe07g0246 | Hepe-Chr7:2340813 | 1.37e-201 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe07g0246 | K01051 | - | csv:101211449 | 936.791 |