Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g0268 ATGAATAACTCACATTCTAATTTCCTTCTTCTTCTTCTTCTTTTCATCACCATCCCTTCCTCTTTTCTTCAGCTTCTTTCTGCAACTCCTTCAACAACACCTCTCCCACTTCAACTTCTCTCTCTGCTTTCCCTCAAATCCTCCATTGAAGACCCATCTTCAAGCTTCCATGACTGGGATCCTACCTTCACCAAACCTGAATTTCAAGACCCAATTTGGTGTTCTTGGTCTGGAATTGAATGCCATCCGAATTCATCTCAAATTACTTCTTTAGATTTGTCTCACCGTAATCTCACTGGCTTCATTCCCTCTGATATCAAGTATTTGACCAGCTTAATTCACTTGAATTTGAGTGGTAACAGCTTGCTTGGGCCTTTTCCCACCGCCATTTTTGAGCTCACTAAGCTTAGAACTCTCGATATCAGTCATAACAATTTTAGCTCTACTTTCCCACCTGGGATTTCCAAGCTTCAATTCTTGAACGTCTTCAATGCCTACAGCAACAATTTCACTGGCCCATTACCGCAAGAACTCGCCTATCTCCATTTTCTCGAATGGCTCAACCTCGGTGGGAGCTACTTCAATGGCAGTATTCCGGCGAGTTATGGCGGGTTTTCGCGGTTGAGATATTTGCATTTGGCTGGGAATGTTCTCGACGGACAAATTCCAGAGAACCTCGCGTATTTAGCCCAACTGGAGAGAATGGAAATCGGTTACAATTCCTTCTCCGGCGGGATTCCGGCGGGATTTCCATTGTTGTTGAATCTGAAATACTTGGATATTGCCGGAGCAAATCTCTCCGGGACTCTGCCAGAGGACATTGGGAACATGACGAAGCTTCAAAATCTGCTTCTCTTCAAGAATCGAATAGCAGGCGAAATTCCAGTAAGTTTAGGGAAATTAGAAGCGCTCGAGGAGCTTGATTTGTCTGAGAATCAACTTACCGGAACAATTCCGTCGGATTTGTATAACCTGAAGGAATTGACAGAGTTGAGTTTGATGGGAAACGATCTCCGTGGGGAAATTCCAGAAGCGCTTGGCCATCTTCCAAATCTCGCCAGTTTACAATTATGGAACAATTCGCTCACCGGACCACTCCCTCAAAAACTCGGCTCCAACGATCAGTTACTTCTAGTTGATGTATCGTCGAATATGCTCATTGGTCCGATTCCTCCAAATCTCTGCCATGGAAATAAGCTCTTCAAGCTCATTCTCTTCTCCAACAAATTAGGGCACGAACTTCCCGCCTCTTTAGCGAACTGCACGTCTCTCGCTCGCTTTCGAATCCAAAACAACCGCCTCAACGGCTCGATTCCTCGCGGTTTCGGACTGCTGGAGAATCTGACATTCGCCGATTTCAGCAACAATAACTTCTCCGGCGAGATTCCGACAGATTTTGGTAATGCGGTTAAGTTACAGTACTTGAACATTTCACTGAACTCCTTCGGAACTTCCTTGCCGGAGAACATCTGGAATTCGACGAGCTTACAGATATTCTCCGCCAGTTCTTCGAAACTCGTCGGAAACATCCCCGATTTCGTCGGATGTAGATCCATCTACAAGATCGAGCTTCAGAACAACAACTTAAACAGCAGTATTCCATGGACAATAGTCCACTGCGAGAAACTACTCACTCTGAATCTAAGCCGGAATTCCTTAACCGGCATTATTCCTTGGGAAGTTTCAACGATACCGTCAATCACCGCCATCGATCTCTCACAAAACCACCTCACAGGTACAATCCCTTCAAATTTCCAAAACTGCACCACAATCGAAACCTTCAACGTATCATACAACAATCTCACCGGCGCCATTCCCTCAACCGGCACAATCTTCCCAGGACTCCACCCGTCATCATTCACCGGCAACGCCGCCCTCTGCGGCGAGATTCTCTCCAAACCCTGCCCCGTCGACGACACGCTAACCGGGACCACGATAGAGGTCCGGCAGCAACAACCACCACGGCGGACGGCGGGAGCAATCGTATGGATAATGGCGGCAGCATTCGGAATCGGACTCTTCGTATTAGTAGCCGGAACACGATGTTTCCAAGCGAATTACAACCGTCGATTCCGTAACGTCGACGAGATAGAAATCGGACCGTGGAGATTAACCGCCTTCCAGCGGTTAAACTTCACGGCGGAGGATGTAATCGAGTGTTTGTCGATGACGGATAAGATTCTAGGAATGGGGTCCACAGGAACGGTGTATAAAGCGGAGATGCCAGGTGGCGAGATCATAGCGGTGAAGAAACTGTGGGGTAAGTATAAGGAAAACATCCGACGGCGGAGAGGGGTTCTGGCGGAAGTGGACGTACTGGGGAACGTGCGGCACAGGAATATTGTGAGATTGTTAGGCTGCTGCAGCAACAGGGAGTGTACGATGTTGCTCTATGAGTATATGCCCAATGGTAACTTGGATGATTTACTGCACGGTAAAAACAAAGGTGAAAATTTGGGGGCAGATTGGATGACTAGGTATAAAATTGCGTTGGGTGTTGCACAGGGGATTTGTTATCTTCACCATGACTGTGATCCCGTCATCGTGCACCGTGATCTTAAGCCGAGTAATATTTTATTGGACGGTGAGATGGAGGCCAGAGTGGCGGATTTTGGCGTCGCTAAGTTGATCCAGACCGATGAATCCATGTCGGTCATTGCTGGATCCTACGGTTACATCGCACCAGAATATGCATATACACTTCAAGTAGACGAAAAGAGCGATATTTATAGCTACGGAGTCGTGTTGATGGAGATTTTGAGTGGTAAGAGATCCGTGGACTCGGAATTTGGCGATGGAAATAGCATTGTGGATTGGGTTAGATCGAAAATCAAGATCAAGGATGAAGTTAATAAAATATTAGACAAGAATGCTGGTGCTTCTTGTGAAAGTGTTAGAAGAGAAATGATACAAATGCTTCGAATTTCATTGCTTTGTACAAGTCGTAACCCTGCAGATCGACCATCAATGCGTGATGTTCTTTTGATGCTACAAGAGGCTAAACCTAAGAGGAAATTACTTGGGAATGTTGTTGGTGGTGAAACAAATGGTAATTGTGATACTACTTGA 3069 46.14 MNNSHSNFLLLLLLFITIPSSFLQLLSATPSTTPLPLQLLSLLSLKSSIEDPSSSFHDWDPTFTKPEFQDPIWCSWSGIECHPNSSQITSLDLSHRNLTGFIPSDIKYLTSLIHLNLSGNSLLGPFPTAIFELTKLRTLDISHNNFSSTFPPGISKLQFLNVFNAYSNNFTGPLPQELAYLHFLEWLNLGGSYFNGSIPASYGGFSRLRYLHLAGNVLDGQIPENLAYLAQLERMEIGYNSFSGGIPAGFPLLLNLKYLDIAGANLSGTLPEDIGNMTKLQNLLLFKNRIAGEIPVSLGKLEALEELDLSENQLTGTIPSDLYNLKELTELSLMGNDLRGEIPEALGHLPNLASLQLWNNSLTGPLPQKLGSNDQLLLVDVSSNMLIGPIPPNLCHGNKLFKLILFSNKLGHELPASLANCTSLARFRIQNNRLNGSIPRGFGLLENLTFADFSNNNFSGEIPTDFGNAVKLQYLNISLNSFGTSLPENIWNSTSLQIFSASSSKLVGNIPDFVGCRSIYKIELQNNNLNSSIPWTIVHCEKLLTLNLSRNSLTGIIPWEVSTIPSITAIDLSQNHLTGTIPSNFQNCTTIETFNVSYNNLTGAIPSTGTIFPGLHPSSFTGNAALCGEILSKPCPVDDTLTGTTIEVRQQQPPRRTAGAIVWIMAAAFGIGLFVLVAGTRCFQANYNRRFRNVDEIEIGPWRLTAFQRLNFTAEDVIECLSMTDKILGMGSTGTVYKAEMPGGEIIAVKKLWGKYKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLLYEYMPNGNLDDLLHGKNKGENLGADWMTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQTDESMSVIAGSYGYIAPEYAYTLQVDEKSDIYSYGVVLMEILSGKRSVDSEFGDGNSIVDWVRSKIKIKDEVNKILDKNAGASCESVRREMIQMLRISLLCTSRNPADRPSMRDVLLMLQEAKPKRKLLGNVVGGETNGNCDTT 1022
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2694704 2699996 - Hsped.07g02680.1 Hepe07g0268 573663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g0268 1022 Pfam Protein kinase domain 725 994 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g0268 1022 Gene3D Ribonuclease Inhibitor 200 358 IPR032675 -
Hepe07g0268 1022 Pfam Leucine rich repeat N-terminal domain 38 81 IPR013210 -
Hepe07g0268 1022 ProSitePatterns Protein kinases ATP-binding region signature. 728 751 IPR017441 GO:0005524(InterPro)
Hepe07g0268 1022 ProSiteProfiles Protein kinase domain profile. 722 1007 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g0268 1022 SMART serkin_6 722 1001 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g0268 1022 FunFam leucine-rich repeat receptor-like protein kinase TDR 801 1009 - -
Hepe07g0268 1022 SUPERFAMILY L domain-like 390 628 - -
Hepe07g0268 1022 Pfam Leucine Rich Repeat 447 468 IPR001611 GO:0005515(InterPro)
Hepe07g0268 1022 Pfam Leucine Rich Repeat 471 492 IPR001611 GO:0005515(InterPro)
Hepe07g0268 1022 Pfam Leucine Rich Repeat 255 277 IPR001611 GO:0005515(InterPro)
Hepe07g0268 1022 Pfam Leucine Rich Repeat 207 229 IPR001611 GO:0005515(InterPro)
Hepe07g0268 1022 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 690 800 - -
Hepe07g0268 1022 SUPERFAMILY Protein kinase-like (PK-like) 725 997 IPR011009 -
Hepe07g0268 1022 FunFam Leucine-rich repeat receptor-like protein kinase TDR 322 637 - -
Hepe07g0268 1022 Gene3D Transferase(Phosphotransferase) domain 1 801 1010 - -
Hepe07g0268 1022 SMART LRR_typ_2 349 373 IPR003591 -
Hepe07g0268 1022 SMART LRR_typ_2 253 277 IPR003591 -
Hepe07g0268 1022 SMART LRR_typ_2 301 325 IPR003591 -
Hepe07g0268 1022 SMART LRR_typ_2 133 157 IPR003591 -
Hepe07g0268 1022 FunFam Leucine-rich repeat receptor-like protein kinase 38 198 - -
Hepe07g0268 1022 Gene3D Ribonuclease Inhibitor 38 199 IPR032675 -
Hepe07g0268 1022 SUPERFAMILY L domain-like 61 410 - -
Hepe07g0268 1022 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 223 318 - -
Hepe07g0268 1022 Gene3D Ribonuclease Inhibitor 359 638 IPR032675 -
Hepe07g0268 1022 ProSitePatterns Serine/Threonine protein kinases active-site signature. 848 860 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe07g0268 1022 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 22 1000 IPR050647 -
Hepe07g0268 1022 Gene3D Phosphorylase Kinase; domain 1 703 800 - -
Hepe07g0268 1022 Pfam Leucine rich repeat 518 577 IPR001611 GO:0005515(InterPro)
Hepe07g0268 1022 Pfam Leucine rich repeat 299 338 IPR001611 GO:0005515(InterPro)
Hepe07g0268 1022 Pfam Leucine rich repeat 87 146 IPR001611 GO:0005515(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe07g0268 Hepe-Chr7:2694704 Hepe07g1890 Hepe-Chr7:62523144 6.59e-89 dispersed
Hepe07g0261 Hepe-Chr7:2578547 Hepe07g0268 Hepe-Chr7:2694704 3.00e-44 proximal
Hepe06g1892 Hepe-Chr6:70119714 Hepe07g0268 Hepe-Chr7:2694704 1.40e-107 transposed
Hepe08g2480 Hepe-Chr8:65896022 Hepe07g0268 Hepe-Chr7:2694704 5.55e-44 transposed
Hepe06g1388 Hepe-Chr6:64090344 Hepe07g0268 Hepe-Chr7:2694704 1.81e-27 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72912 PF00069 Pkinase 4.90E-47 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g0268 - - - 0.0