Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g0324 ATGTCGGTGATGTTGGGTTCTTTGTCTTCTCTTTGGATCATTTTGGTGCTGGGTTTTGTTTCTCTGCTCTCTGCTAATCCTGAAGGCGATGCTTTGAATGCGTTGAAGTCAAATTTACAAGATCCCAATGGCGTACTGCAGAGTTGGGATCCTACACTTGTTAATCCCTGCACATGGTTCCATGTCACCTGTGACAGTGAGAATAGTGTCACTCGAGTTGATCTTGGAAATGCAAATCTATCTGGCACATTAGTTCCACAACTTGGTCAGCTTCTGAGTTTGCAGTATTTGGAGCTTTATAGTAACAATATTACTGGAGGGATTCCGGAGGAGCTTGGGGAGTTGACAAACTTGGTGAGCTTGGATCTTTACTTGAACAATTTAACTGGTCCCATACCCGTCACACTTGGCCAGCTTGAAAAACTGCGTTTCCTGCGTCTTAACAACAACACCTTATCAGGAACTATTCCAATGTCATTAACTAATGTTAAATCTTTGCAAGTACTGGATCTTTCATACAACCAACTGACTGGAGATATTCCGATCAATGGTTCTTTTTCTCTTTTTACTCCTATCAGTTTTGCTCATAATAATCTTAATGAATCTGCTGTACGTACTCCACCACCTCCTTTACCTTCTTCACCATCCCCCGCATCAGGTAATAGTGCCACTGGAGCTATTGCTGGTGGAGTTGCTGCTGCTGCCGCTTTACTGTTTGCTGCTCCTGCTGTTGCAGTTGCTCTGTGGCGTCGGAAGAAACCACAAGATCATTTCTTTGATGTACCTGCCGAAGAGGATCCAGAAGTTCATCTTGGTCAGCTCAAGAGGTTCTCTCTACGTGAACTACAAGTTGCAACAGATCATTTTAGCAACAAACATATTCTAGGTAAAGGTGGTTTTGGCAAGGTGTATAAGGGACGGCTGGCTGACGGATCTCTAGTTGCAGTTAAAAGACTTAAAGAGGATCGTTCCCAGGGTGGGGAGCTGCAATTCCAAACAGAAGTAGAGATGATCAGCATGGCCGTGCATCGTAATCTGCTCCGCCTGCGTGGGTTTTGTATGACACCAACTGAGCGGTTGCTGGTCTATCCGTTAATGGTTAACGGAAGTGTAGCATCATGTTTAAGAGAACGTCCAGAAACAACGCCTCCACTTAATTGGTTAAATCGAAAACACATTGCTTTGGGAGCGTCAAGGGGGCTTGCTTATCTACATGATCATTGTAGTCCTAAGATTATTCATCGTGATGTGAAAGCCGCAAACATTTTGCTTGACGAGGAGTTTGAAGCTGTTGTTGGTGATTTTGGGTTGGCTAAACTCATGGACTACAAAGATACTCATGTCACAACTGCAGTACGAGGAACAATTGGGCATATAGCGCCCGAGTACCTTTCGACTGGAAAGTCTTCTGAAAAGACTGATGTTTTTGGGTATGGGGTAATGCTTCTTGAACTCATAACTGGACAGAGGGCCTTTGATCTTGCCCGGCTTGCAAATGACGATGATGTCATGCTTCTTGATTGGGTGAAAGGACTTCTAAAAGACAAGAGGTTGGAAACACTAGTTGATCCCGATCTTGCTGGAAACTATCCTGATTACGAAGTCGAGCAGCTTATTCAAGTTGCCTTGTTGTGCACACAAGTCACTCCTACGGAGCGGCCTAAGATGTCGGAGGTTGTACGGATGCTTGAGGGTGATGGTTTAGCTGAAAGATGGGAAGAATGGCAGAAAGAGGAGCGGCTCCATCAAGAAGTAAGCCGCAATCCCCACCCAAGTATTACTTGGATTCTCGACTCTACTGCTGAAATGCCTCCTGATGAATTGTCCGGTCCAAGATGA 1839 44.81 MSVMLGSLSSLWIILVLGFVSLLSANPEGDALNALKSNLQDPNGVLQSWDPTLVNPCTWFHVTCDSENSVTRVDLGNANLSGTLVPQLGQLLSLQYLELYSNNITGGIPEELGELTNLVSLDLYLNNLTGPIPVTLGQLEKLRFLRLNNNTLSGTIPMSLTNVKSLQVLDLSYNQLTGDIPINGSFSLFTPISFAHNNLNESAVRTPPPPLPSSPSPASGNSATGAIAGGVAAAAALLFAAPAVAVALWRRKKPQDHFFDVPAEEDPEVHLGQLKRFSLRELQVATDHFSNKHILGKGGFGKVYKGRLADGSLVAVKRLKEDRSQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPLMVNGSVASCLRERPETTPPLNWLNRKHIALGASRGLAYLHDHCSPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKDKRLETLVDPDLAGNYPDYEVEQLIQVALLCTQVTPTERPKMSEVVRMLEGDGLAERWEEWQKEERLHQEVSRNPHPSITWILDSTAEMPPDELSGPR 612
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 3259241 3277759 + Hsped.07g03240.1 Hepe07g0324 573719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g0324 612 ProSitePatterns Protein kinases ATP-binding region signature. 295 317 IPR017441 GO:0005524(InterPro)
Hepe07g0324 612 ProSiteProfiles Protein kinase domain profile. 289 576 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g0324 612 FunFam Somatic embryogenesis receptor kinase 1 24 211 - -
Hepe07g0324 612 FunFam Somatic embryogenesis receptor kinase 1 258 365 - -
Hepe07g0324 612 Pfam Leucine rich repeat N-terminal domain 26 65 IPR013210 -
Hepe07g0324 612 MobiDBLite consensus disorder prediction 200 221 - -
Hepe07g0324 612 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 10 611 - -
Hepe07g0324 612 Gene3D Transferase(Phosphotransferase) domain 1 366 583 - -
Hepe07g0324 612 Gene3D Ribonuclease Inhibitor 25 206 IPR032675 -
Hepe07g0324 612 ProSitePatterns Serine/Threonine protein kinases active-site signature. 412 424 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe07g0324 612 Pfam Protein tyrosine and serine/threonine kinase 292 563 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe07g0324 612 SUPERFAMILY L domain-like 27 202 - -
Hepe07g0324 612 Pfam Leucine Rich Repeat 165 181 IPR001611 GO:0005515(InterPro)
Hepe07g0324 612 Pfam Leucine Rich Repeat 117 139 IPR001611 GO:0005515(InterPro)
Hepe07g0324 612 Pfam Leucine Rich Repeat 141 162 IPR001611 GO:0005515(InterPro)
Hepe07g0324 612 Pfam Leucine Rich Repeat 93 115 IPR001611 GO:0005515(InterPro)
Hepe07g0324 612 Gene3D Phosphorylase Kinase; domain 1 258 364 - -
Hepe07g0324 612 SMART serkin_6 289 563 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g0324 612 FunFam Somatic embryogenesis receptor-like kinase 1 366 583 - -
Hepe07g0324 612 SUPERFAMILY Protein kinase-like (PK-like) 268 564 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe06g0141 Hepe-Chr6:5131041 Hepe07g0324 Hepe-Chr7:3259241 1.55e-273 dispersed
Hepe07g0324 Hepe-Chr7:3259241 Hepe10g0030 Hepe-Chr10:283159 7.00e-157 dispersed
Hepe07g0661 Hepe-Chr7:7598954 Hepe07g0324 Hepe-Chr7:3259241 5.65e-37 dispersed
Hepe09g1039 Hepe-Chr9:10797914 Hepe07g0324 Hepe-Chr7:3259241 2.07e-33 dispersed
Hepe02g0643 Hepe-Chr2:6706559 Hepe07g0324 Hepe-Chr7:3259241 4.17e-32 transposed
Hepe02g0770 Hepe-Chr2:8495865 Hepe07g0324 Hepe-Chr7:3259241 5.43e-248 wgd
Hepe06g1331 Hepe-Chr6:63514796 Hepe07g0324 Hepe-Chr7:3259241 1.86e-47 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72913 PF00069 Pkinase 7.90E-44 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g0324 K13416 - csv:101216389 1073.92