Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hepe07g0339 | ATGGATAACTTATGCTGCTTCAATTCTGTCTATTCTCAGTTTGTAGGAGGACGTTCGTCATGTACCTCCGGAAAGGGCAGGGGTAATCAATGCCCTGCCAGGTATGGCTTTAGCCTAGTAAAAGGCAAAGCAAATCATCCCATGGAAGATTATCATGTTGCTAAATTTATTACAGTACATGGCCATGAGCTCGGCCTTTTTGCTATATATGATGGACATCTAGGAGACAGCGTACCAGCCTATCTACAGAAGCATCTATTTCCTAATATACTGAAGGATGAGGAATTCTGGTCGAATCCCCGTAGCTCTATCTTTAAGTCTTATGAGAAGACAGATCAAGCAATACTCTCACACAGTCCCGACTTGGGAAGAGGTGGATCCACTGCTGTCACTGCAATTTTGATAAACGGTCAGAAATTATGGGTGGCTAATGTTGGAGATTCACGGGCAGTCCTTTCGAAAAGAGGGCAGGAAGTACAAATGTCTGTTGATCACGAACCAAACACTGAGCGAGGAAGTATTGAGGACAGAGGTGGCTTTGTCTCTAACATGCCAGGAGATGTTGCACGAGTGAATGGGCAGCTTGCAGTTTCTCGAGCATTTGGCGACAAGAACCTCAAGACACACTTGCGATGTGATCCCGACATAAAGAATGCCGATATTGACTCTGACACTGAGCTTCTTATCTTAGCAAGTGATGGTCTATGGAAGGTCATGTCGAATCAAGAAGCGGTGGACATAGCAAGAAGAACCAAGGATCCCCAGAGAGCAGCAAAGCAATTAGCAGCAGAAGCACTGAAAAGGGAAAGCAAAGACGACATCTCGATCGTCGTAGTTCGTTTCAAAGGGTAA | 852 | 45.07 | MDNLCCFNSVYSQFVGGRSSCTSGKGRGNQCPARYGFSLVKGKANHPMEDYHVAKFITVHGHELGLFAIYDGHLGDSVPAYLQKHLFPNILKDEEFWSNPRSSIFKSYEKTDQAILSHSPDLGRGGSTAVTAILINGQKLWVANVGDSRAVLSKRGQEVQMSVDHEPNTERGSIEDRGGFVSNMPGDVARVNGQLAVSRAFGDKNLKTHLRCDPDIKNADIDSDTELLILASDGLWKVMSNQEAVDIARRTKDPQRAAKQLAAEALKRESKDDISIVVVRFKG | 283 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 3402805 | 3408307 | + | Hsped.07g03390.1 | Hepe07g0339 | 573734 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hepe07g0339 | 283 | ProSiteProfiles | PPM-type phosphatase domain profile. | 34 | 281 | IPR001932 | - | |
| Hepe07g0339 | 283 | PANTHER | PROTEIN PHOSPHATASE | 28 | 279 | IPR015655 | GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER) | |
| Hepe07g0339 | 283 | FunFam | Probable protein phosphatase 2C 39 | 26 | 282 | - | - | |
| Hepe07g0339 | 283 | Pfam | Protein phosphatase 2C | 43 | 274 | IPR001932 | - | |
| Hepe07g0339 | 283 | SUPERFAMILY | PP2C-like | 31 | 282 | IPR036457 | - | |
| Hepe07g0339 | 283 | SMART | PP2C_4 | 30 | 279 | IPR001932 | - | |
| Hepe07g0339 | 283 | SMART | PP2C_SIG_2 | 45 | 281 | IPR001932 | - | |
| Hepe07g0339 | 283 | CDD | PP2Cc | 34 | 281 | IPR001932 | - | |
| Hepe07g0339 | 283 | Gene3D | - | 30 | 283 | IPR036457 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Hepe01g2126 | Hepe-Chr1:85895053 | Hepe07g0339 | Hepe-Chr7:3402805 | 3.00e-155 | dispersed | |
| Hepe03g0294 | Hepe-Chr3:3957600 | Hepe07g0339 | Hepe-Chr7:3402805 | 5.68e-22 | dispersed | |
| Hepe04g2057 | Hepe-Chr4:75410809 | Hepe07g0339 | Hepe-Chr7:3402805 | 2.70e-76 | dispersed | |
| Hepe07g0084 | Hepe-Chr7:787530 | Hepe07g0339 | Hepe-Chr7:3402805 | 3.45e-56 | dispersed | |
| Hepe07g0339 | Hepe-Chr7:3402805 | Hepe10g1335 | Hepe-Chr10:49448469 | 3.75e-35 | dispersed | |
| Hepe07g0339 | Hepe-Chr7:3402805 | Hepe02g0124 | Hepe-Chr2:1422576 | 2.15e-104 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hepe07g0339 | K17506 | - | csv:101214223 | 545.814 |