Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g0357 ATGGATAGATTAGGGGCGTTTGGAGTGCGGGTTCGACATTTTAAGTGTGGAAATGTCAAGCCTAGAGAAATGGCTGGTCAATCAGATCCTCACCTGACCCTATTTTCTGCAGAAGAGGTTGAGTTTGTAGCTGAAGATGAAACAGTGGAGATTGTTCCTAATATGAGAATGGATTCTCTGCATTTGATCTGCGGGGATTATGGTCCGTTCTACCCCCAAATAGCAACCGAAGTTCCATTGTGGCTAGCGATTGCTCTGAAAAAAAGAGGGAAATGTGCAATTAGGCCTCCAGAATGGATGTCAGTGGAGAAGTTGACACAAATTTTGGAGGCAGAACGAGAGTCTCAAGGATCTTTCCAGATACTACCCTTCCATTACGTGGAAATATCAAAACTTCTTTTCGACCATGCACGAGATGACGTTCCTGACATGTATTTGGTGAGGTCTCTTATTGAAGATATCAGGGATGTTAGGTTTCACAAAGTTGAAACCAGCTTGGAGTCGATTGATACACGCACATCTGCAGTGAAGATTAAAGATCTATCTGCCATGGAAGTGAATATAGTTAGACCATTTGTCGGTAGAGCGCTGCAGGCAATTTACAAGCATGGAAATCCTGAGTTGGTCCCAGATCAAGAAAGGATGACCAATGTGCAGCCACAAGGACACGATCACGGCCAAAGACGACCTCTTCGGAGACGGTAG 705 44.54 MDRLGAFGVRVRHFKCGNVKPREMAGQSDPHLTLFSAEEVEFVAEDETVEIVPNMRMDSLHLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIRPPEWMSVEKLTQILEAERESQGSFQILPFHYVEISKLLFDHARDDVPDMYLVRSLIEDIRDVRFHKVETSLESIDTRTSAVKIKDLSAMEVNIVRPFVGRALQAIYKHGNPELVPDQERMTNVQPQGHDHGQRRPLRRR 234
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 3646360 3650396 + Hsped.07g03570.1 Hepe07g0357 573752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g0357 234 CDD GINS_B_Psf2 36 97 - -
Hepe07g0357 234 Pfam GINS complex protein helical bundle domain 94 193 IPR021151 -
Hepe07g0357 234 Gene3D - 101 214 - -
Hepe07g0357 234 FunFam DNA replication complex GINS protein PSF2 101 217 - -
Hepe07g0357 234 PANTHER DNA REPLICATION COMPLEX GINS PROTEIN PSF2 24 221 IPR007257 GO:0000727(PANTHER)|GO:0000811(PANTHER)|GO:0005634(InterPro)|GO:0006260(InterPro)
Hepe07g0357 234 FunFam DNA replication complex GINS protein PSF2 35 100 - -
Hepe07g0357 234 Gene3D - 35 100 - -
Hepe07g0357 234 MobiDBLite consensus disorder prediction 215 234 - -
Hepe07g0357 234 SUPERFAMILY GINS helical bundle-like 96 205 IPR036224 -
Hepe07g0357 234 PIRSF GINS_PSF2 25 234 IPR007257 GO:0005634(InterPro)|GO:0006260(InterPro)
Hepe07g0357 234 CDD GINS_A_psf2 89 205 - -
Hepe07g0357 234 SUPERFAMILY PriA/YqbF domain 35 94 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe07g0357 Hepe-Chr7:3646360 Hepe07g1096 Hepe-Chr7:18331342 3.90e-150 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g0357 K10733 - csv:101212053 401.749