Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe07g0357 | ATGGATAGATTAGGGGCGTTTGGAGTGCGGGTTCGACATTTTAAGTGTGGAAATGTCAAGCCTAGAGAAATGGCTGGTCAATCAGATCCTCACCTGACCCTATTTTCTGCAGAAGAGGTTGAGTTTGTAGCTGAAGATGAAACAGTGGAGATTGTTCCTAATATGAGAATGGATTCTCTGCATTTGATCTGCGGGGATTATGGTCCGTTCTACCCCCAAATAGCAACCGAAGTTCCATTGTGGCTAGCGATTGCTCTGAAAAAAAGAGGGAAATGTGCAATTAGGCCTCCAGAATGGATGTCAGTGGAGAAGTTGACACAAATTTTGGAGGCAGAACGAGAGTCTCAAGGATCTTTCCAGATACTACCCTTCCATTACGTGGAAATATCAAAACTTCTTTTCGACCATGCACGAGATGACGTTCCTGACATGTATTTGGTGAGGTCTCTTATTGAAGATATCAGGGATGTTAGGTTTCACAAAGTTGAAACCAGCTTGGAGTCGATTGATACACGCACATCTGCAGTGAAGATTAAAGATCTATCTGCCATGGAAGTGAATATAGTTAGACCATTTGTCGGTAGAGCGCTGCAGGCAATTTACAAGCATGGAAATCCTGAGTTGGTCCCAGATCAAGAAAGGATGACCAATGTGCAGCCACAAGGACACGATCACGGCCAAAGACGACCTCTTCGGAGACGGTAG | 705 | 44.54 | MDRLGAFGVRVRHFKCGNVKPREMAGQSDPHLTLFSAEEVEFVAEDETVEIVPNMRMDSLHLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIRPPEWMSVEKLTQILEAERESQGSFQILPFHYVEISKLLFDHARDDVPDMYLVRSLIEDIRDVRFHKVETSLESIDTRTSAVKIKDLSAMEVNIVRPFVGRALQAIYKHGNPELVPDQERMTNVQPQGHDHGQRRPLRRR | 234 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 3646360 | 3650396 | + | Hsped.07g03570.1 | Hepe07g0357 | 573752 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe07g0357 | 234 | CDD | GINS_B_Psf2 | 36 | 97 | - | - | |
Hepe07g0357 | 234 | Pfam | GINS complex protein helical bundle domain | 94 | 193 | IPR021151 | - | |
Hepe07g0357 | 234 | Gene3D | - | 101 | 214 | - | - | |
Hepe07g0357 | 234 | FunFam | DNA replication complex GINS protein PSF2 | 101 | 217 | - | - | |
Hepe07g0357 | 234 | PANTHER | DNA REPLICATION COMPLEX GINS PROTEIN PSF2 | 24 | 221 | IPR007257 | GO:0000727(PANTHER)|GO:0000811(PANTHER)|GO:0005634(InterPro)|GO:0006260(InterPro) | |
Hepe07g0357 | 234 | FunFam | DNA replication complex GINS protein PSF2 | 35 | 100 | - | - | |
Hepe07g0357 | 234 | Gene3D | - | 35 | 100 | - | - | |
Hepe07g0357 | 234 | MobiDBLite | consensus disorder prediction | 215 | 234 | - | - | |
Hepe07g0357 | 234 | SUPERFAMILY | GINS helical bundle-like | 96 | 205 | IPR036224 | - | |
Hepe07g0357 | 234 | PIRSF | GINS_PSF2 | 25 | 234 | IPR007257 | GO:0005634(InterPro)|GO:0006260(InterPro) | |
Hepe07g0357 | 234 | CDD | GINS_A_psf2 | 89 | 205 | - | - | |
Hepe07g0357 | 234 | SUPERFAMILY | PriA/YqbF domain | 35 | 94 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe07g0357 | Hepe-Chr7:3646360 | Hepe07g1096 | Hepe-Chr7:18331342 | 3.90e-150 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe07g0357 | K10733 | - | csv:101212053 | 401.749 |