Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe07g0362 | ATGACGAGACAAAAAATAGAGATAAAGAAAATAGACAATATAGCAGCAAGGCAAGTGACATTTTCGAAGAGAAGAAGAGGGCTATTCAAAAAAGCTCATGAACTCGCAACTCTTTGTGATGCTGATATTGCTCTCATTGTTTTTTCTGCTTCTGGAAAGCTATTTGACTATTCTAGCTCAAGCATGCAGGAGTTACTGAGAAGACATAACATGCTACCAGAGGTGAATAACTTTAGCCAACCTCCATCTCAGCTTGAAAAGAGTGCCTATTCTAAATTGACTGAGGAATTTGCAACCAAGACTAAAGAACTTAGGCATATGAGGGGAGAGGAGCTACAAGGAATGGGAATAGAAGAATTAAAGCAGCTGGAGAAACTGCTTGAGATTGGTTTGAGTCGTGTAATAGAGACCAAGGATGAGAAGTTTCTAAAAGAGATTGGTGCTGTAAAGGAGAAGGAAGCTTTGTTGATGAAAGAGAATCAGCGACTAAGGAATCAAATGGCAACTTTGAATAGAGAGCAAGAACAACAAGCAGTGATTGGTGGGAATAATTCCTTGTGGTCAAAGTCAAACACCAGCAACAGCAGCTCCTCAACAAACCCTAATTCTCAAGATTATGATGACATCTCTCTTAAATTGGGTCTTTGA | 648 | 39.35 | MTRQKIEIKKIDNIAARQVTFSKRRRGLFKKAHELATLCDADIALIVFSASGKLFDYSSSSMQELLRRHNMLPEVNNFSQPPSQLEKSAYSKLTEEFATKTKELRHMRGEELQGMGIEELKQLEKLLEIGLSRVIETKDEKFLKEIGAVKEKEALLMKENQRLRNQMATLNREQEQQAVIGGNNSLWSKSNTSNSSSSTNPNSQDYDDISLKLGL | 215 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 3674099 | 3681735 | + | Hsped.07g03620.1 | Hepe07g0362 | 573757 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe07g0362 | 215 | MobiDBLite | consensus disorder prediction | 179 | 207 | - | - | |
Hepe07g0362 | 215 | ProSiteProfiles | MADS-box domain profile. | 1 | 61 | IPR002100 | GO:0003677(InterPro)|GO:0046983(InterPro) | |
Hepe07g0362 | 215 | Pfam | K-box region | 86 | 167 | IPR002487 | GO:0003700(InterPro)|GO:0005634(InterPro)|GO:0006355(InterPro) | |
Hepe07g0362 | 215 | PANTHER | SERUM RESPONSE FACTOR HOMOLOG | 1 | 197 | IPR050142 | GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0006357(PANTHER) | |
Hepe07g0362 | 215 | ProSiteProfiles | K-box domain profile. | 83 | 173 | IPR002487 | GO:0003700(InterPro)|GO:0005634(InterPro)|GO:0006355(InterPro) | |
Hepe07g0362 | 215 | Gene3D | - | 15 | 96 | IPR036879 | GO:0003677(InterPro)|GO:0046983(InterPro) | |
Hepe07g0362 | 215 | FunFam | Transcription factor, MADS-box | 13 | 83 | - | - | |
Hepe07g0362 | 215 | CDD | MADS_MEF2_like | 3 | 69 | IPR033896 | GO:0000977(InterPro)|GO:0045944(InterPro) | |
Hepe07g0362 | 215 | SUPERFAMILY | SRF-like | 2 | 83 | IPR036879 | GO:0003677(InterPro)|GO:0046983(InterPro) | |
Hepe07g0362 | 215 | PRINTS | MADS domain signature | 23 | 38 | IPR002100 | GO:0003677(InterPro)|GO:0046983(InterPro) | |
Hepe07g0362 | 215 | PRINTS | MADS domain signature | 3 | 23 | IPR002100 | GO:0003677(InterPro)|GO:0046983(InterPro) | |
Hepe07g0362 | 215 | PRINTS | MADS domain signature | 38 | 59 | IPR002100 | GO:0003677(InterPro)|GO:0046983(InterPro) | |
Hepe07g0362 | 215 | ProSitePatterns | MADS-box domain signature. | 3 | 57 | IPR002100 | GO:0003677(InterPro)|GO:0046983(InterPro) | |
Hepe07g0362 | 215 | Pfam | SRF-type transcription factor (DNA-binding and dimerisation domain) | 10 | 57 | IPR002100 | GO:0003677(InterPro)|GO:0046983(InterPro) | |
Hepe07g0362 | 215 | SMART | madsneu2 | 1 | 60 | IPR002100 | GO:0003677(InterPro)|GO:0046983(InterPro) | |
Hepe07g0362 | 215 | MobiDBLite | consensus disorder prediction | 179 | 215 | - | - | |
Hepe07g0362 | 215 | Coils | Coil | 153 | 176 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe04g1400 | Hepe-Chr4:69624078 | Hepe07g0362 | Hepe-Chr7:3674099 | 1.07e-56 | dispersed | |
Hepe07g0362 | Hepe-Chr7:3674099 | Hepe10g0423 | Hepe-Chr10:4743159 | 4.10e-53 | dispersed | |
Hepe07g0362 | Hepe-Chr7:3674099 | Hepe07g0369 | Hepe-Chr7:3752332 | 5.94e-27 | proximal | |
Hepe02g0720 | Hepe-Chr2:7912234 | Hepe07g0362 | Hepe-Chr7:3674099 | 8.73e-58 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
55895 | PF01486 | K-box | 8.40E-16 | No_clan | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe07g0362 | - | - | - | 0.0 |