Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe07g0407 | ATGGGTGCTCCAAAGCAGAAATGGACTAACCAAGAAGAATCAGCCCTGAAGGCCGGAGTTGTTAAGCACGGAGCAGGAAAGTGGCGAACGATTCTTAAGGATCCTGAATTCAGCAATGTACTGTATCTTCGTTCAAATGTTGATCTCAAGGACAAGTGGAGAAATATGAGTGTCATGGCTAATGGCTGGGGGTCCCGAGAGAAGGCCAGGTTGGCAATTAAGAGATTGCAGGCTCCTAAAAAAGATGAGAACATTGCCACACAAATTGTTGCTGTCCAAAGTGAAGATGAATTGCCAGAAGCTAAGTCTATTTCTCTTTCCTCGGATATCAAGCAGATATCTGGTTCAAAGGGATCCAATGTAAGAAAAGAAGAAGAGGAGGAAGATGAAGAAGAAGAAGAAAAGGAAGTAGAAAGAATAGAAAGAGATGCAAGATATGATAGTCATAGGTTAGACAATCTTATAATTGAGGCAATTACTAGCTTGAGGGAACGTGGTGGCTCTAATAAGACAGACATTACCTCATATATAGAGGATCAATATTGGGCACCTCCAGACTTCAAGAGGTTGTTATCAACAAAATTGAAGTTCTTAACAGCTAGTGGTAAACTGGTCAAGGCCAAACGGAAATATAGGCTTCCTCCAGGGGTGCCTTCGTCAGAGAGGAGCTCTATGTTGTTGTTGGATGACCAGCAAAGAGCTTCTATAAGAGACAAGGAGGAAATGTGTATTCTTGCGAAAGCTCAAATTGATCTCGAATTAGCCAAGATGAGGACCATGACTTCCCAAGAGGCAGCGGCAGCTGCTGCTCGAGCAGTTGCAGAAGCAGAAGCAGCAATAGCAGAAGCTGAAGAGGCGGCAAGGGAAGCCGAGGCAGCTGAAGCTGATGCAGAAGCAGCACAGTCATTTGCAGAAGCCGCAATGAAGACACTGAAAGGAAGAAATCTCCCGAAGATGATGATCCGGGTTTGA | 972 | 44.44 | MGAPKQKWTNQEESALKAGVVKHGAGKWRTILKDPEFSNVLYLRSNVDLKDKWRNMSVMANGWGSREKARLAIKRLQAPKKDENIATQIVAVQSEDELPEAKSISLSSDIKQISGSKGSNVRKEEEEEDEEEEEKEVERIERDARYDSHRLDNLIIEAITSLRERGGSNKTDITSYIEDQYWAPPDFKRLLSTKLKFLTASGKLVKAKRKYRLPPGVPSSERSSMLLLDDQQRASIRDKEEMCILAKAQIDLELAKMRTMTSQEAAAAAARAVAEAEAAIAEAEEAAREAEAAEADAEAAQSFAEAAMKTLKGRNLPKMMIRV | 323 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 4143117 | 4148018 | + | Hsped.07g04070.1 | Hepe07g0407 | 573802 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe07g0407 | 323 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 1 | 33 | IPR017930 | - | |
Hepe07g0407 | 323 | SMART | sant | 4 | 59 | IPR001005 | - | |
Hepe07g0407 | 323 | ProSiteProfiles | Linker histone H1/H5 globular (H15) domain profile. | 147 | 215 | IPR005818 | GO:0000786(InterPro)|GO:0003677(InterPro)|GO:0006334(InterPro) | |
Hepe07g0407 | 323 | Coils | Coil | 120 | 143 | - | - | |
Hepe07g0407 | 323 | Coils | Coil | 266 | 303 | - | - | |
Hepe07g0407 | 323 | SMART | h15plus2 | 146 | 210 | IPR005818 | GO:0000786(InterPro)|GO:0003677(InterPro)|GO:0006334(InterPro) | |
Hepe07g0407 | 323 | SUPERFAMILY | Homeodomain-like | 2 | 73 | IPR009057 | - | |
Hepe07g0407 | 323 | CDD | SANT_TRF | 6 | 56 | - | - | |
Hepe07g0407 | 323 | Gene3D | - | 146 | 222 | IPR036388 | - | |
Hepe07g0407 | 323 | SUPERFAMILY | Winged helix DNA-binding domain | 148 | 221 | IPR036390 | - | |
Hepe07g0407 | 323 | FunFam | Telomere repeat-binding factor 1 | 8 | 86 | - | - | |
Hepe07g0407 | 323 | Pfam | Myb-like DNA-binding domain | 5 | 56 | IPR001005 | - | |
Hepe07g0407 | 323 | Gene3D | - | 8 | 94 | - | - | |
Hepe07g0407 | 323 | MobiDBLite | consensus disorder prediction | 109 | 139 | - | - | |
Hepe07g0407 | 323 | PANTHER | SINGLE MYB HISTONE 4 | 1 | 317 | IPR044597 | GO:0003691(InterPro) | |
Hepe07g0407 | 323 | Pfam | linker histone H1 and H5 family | 151 | 208 | IPR005818 | GO:0000786(InterPro)|GO:0003677(InterPro)|GO:0006334(InterPro) | |
Hepe07g0407 | 323 | ProSiteProfiles | Myb-like domain profile. | 5 | 57 | IPR001005 | - | |
Hepe07g0407 | 323 | FunFam | Telomere repeat-binding factor 1 | 2 | 58 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe01g2350 | Hepe-Chr1:88019712 | Hepe07g0407 | Hepe-Chr7:4143117 | 2.51e-07 | dispersed | |
Hepe02g1515 | Hepe-Chr2:19792414 | Hepe07g0407 | Hepe-Chr7:4143117 | 2.66e-28 | dispersed | |
Hepe06g1959 | Hepe-Chr6:70831045 | Hepe07g0407 | Hepe-Chr7:4143117 | 5.82e-08 | dispersed | |
Hepe07g0407 | Hepe-Chr7:4143117 | Hepe08g0681 | Hepe-Chr8:6116629 | 1.83e-06 | dispersed | |
Hepe04g1324 | Hepe-Chr4:68823358 | Hepe07g0407 | Hepe-Chr7:4143117 | 7.35e-77 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
55898 | PF00538 | Linker_histone | 2.30E-08 | CL0123 | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe07g0407 | K09422 | - | csv:101218411 | 451.44 |