Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g0418 ATGGAACCTATAGGAGCCATATCAGAAAGAGAATGGATTTCTCTAAGTGGAACTTATACAGCTGAGGAATCTGATTTCATGGCTAATTTGCTCAACAATTATTGTCTTCCAAATGAGCTAAATTCAGATTTGAGCTTGGAAATCCCATCTGCTTATTGGGTTGCTGCTGCTGCCAATAATGAATTAGCACCATCATTGACCATGGCAGTCATGGATGAACCTTCTTATTATTCTTCAGATGCTTCTGATTCTTCCAATATGTATGGCCTTCCACAAGGCAGCAACCACCATTACACATTGAGTGATTCTCACCCTCTTTGGTTGTCCAATGGTGCTGCCTCTTTGTCCTTGGATTTCTCCATGGAGGATGTCGGAAATTCCGATCGGTTGGACGACAATGGTTCGAGTCGAAAAACGAGGCAACAATGCAGGCTGCAACAGTCCCCTGCTGATGACCCTGTTGCTGCAGTTGTTGTTGTCAATGGGAAGAGCTCACGGCCGAAAAGGAAAGCCGAGGAAGAAGCTATGAGGGACGAGAAAGTTGCGGTCGACGATGACTCGAAGAAGCGATCGCTGAGTTTTCCTGATGTCGAAAAGACGAAGAGGCCGACCGCGAGGGCACGGAAGATCCCGAAGCTTGGTTCGGGTAGCTGCAATGAAGAGGATCACATTGTTAGTCCAAATAATAATGGGCAGTGCACAAGCAGTTTCAACTCTGAGGATGACTATAATAATGAGACTCAAGAAATCAATGGTGGAATCACTTCAAGCTCAAGCTCAAGAGGAAAGCCAAGAGCCAGTAGAGGCTCAGCCACAGACCCTCAAAGCCTCTATGCAAGGAAAAGAAGAGAAAGAATCAATGAAAGGTTGAGAATCTTACAAGGCCTCGTCCCGAACGGCACGAAGGTTGACATCAGTACAATGCTTGAAGAAGCTGTTCAATATGTGAAGTTTTTGCAGCTACAAATCAAGTTGTTGAGCTCTGATGATCTATGGATGTATGCACCAATTGCTTACAATGGAATGGACATTGGACTTAATTAA 1044 44.73 MEPIGAISEREWISLSGTYTAEESDFMANLLNNYCLPNELNSDLSLEIPSAYWVAAAANNELAPSLTMAVMDEPSYYSSDASDSSNMYGLPQGSNHHYTLSDSHPLWLSNGAASLSLDFSMEDVGNSDRLDDNGSSRKTRQQCRLQQSPADDPVAAVVVVNGKSSRPKRKAEEEAMRDEKVAVDDDSKKRSLSFPDVEKTKRPTARARKIPKLGSGSCNEEDHIVSPNNNGQCTSSFNSEDDYNNETQEINGGITSSSSSRGKPRASRGSATDPQSLYARKRRERINERLRILQGLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLN 347
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 4351725 4353171 - Hsped.07g04180.1 Hepe07g0418 573813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g0418 347 Gene3D - 270 327 IPR036638 GO:0046983(InterPro)
Hepe07g0418 347 FunFam Basic helix-loop-helix transcription factor 271 328 - -
Hepe07g0418 347 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 270 319 IPR011598 GO:0046983(InterPro)
Hepe07g0418 347 MobiDBLite consensus disorder prediction 165 204 - -
Hepe07g0418 347 Pfam Helix-loop-helix DNA-binding domain 280 320 IPR011598 GO:0046983(InterPro)
Hepe07g0418 347 SMART finulus 276 325 IPR011598 GO:0046983(InterPro)
Hepe07g0418 347 MobiDBLite consensus disorder prediction 126 281 - -
Hepe07g0418 347 MobiDBLite consensus disorder prediction 221 274 - -
Hepe07g0418 347 CDD bHLH_AtIND_like 271 333 - -
Hepe07g0418 347 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 86 330 IPR045843 GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0006355(InterPro)|GO:0006357(PANTHER)
Hepe07g0418 347 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 270 335 IPR036638 GO:0046983(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g2384 Hepe-Chr2:69148357 Hepe07g0418 Hepe-Chr7:4351725 2.52e-20 dispersed
Hepe07g0418 Hepe-Chr7:4351725 Hepe09g0590 Hepe-Chr9:5547958 4.74e-16 dispersed
Hepe01g1823 Hepe-Chr1:83179898 Hepe07g0418 Hepe-Chr7:4351725 6.71e-38 wgd
Hepe02g0650 Hepe-Chr2:6822390 Hepe07g0418 Hepe-Chr7:4351725 1.52e-53 wgd
Hepe07g0418 Hepe-Chr7:4351725 Hepe08g1329 Hepe-Chr8:15158851 2.22e-42 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
55899 PF00010 HLH 2.40E-08 No_clan Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g0418 - - - 0.0