Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g0442 ATGCAGAACACCGGCCCAGAAGATGTTTTCATCAAAGTGATTTGCTGTGGAGTCTGCCACTCTGATCTTCACCAAATAAAAAATGACCTCGGCATGTCGAATTACCCCATGGTTCCTGGACATGAAGTTGTTGGAGAAGTGGTGGAAGTTGGATCGGAAGTTGATCGGTTCAGAACAGGGGAATTGGTCGGAGTTGGATGTATTGTTGGATCGTGCTCGAGTTGCAGCCCTTGTAATTCCGATAAGGAACAGTATTGTAACAGGAGAATCTGGAGCTATAACGACGTTTATCACGACGGCCGCCCCACCCAAGGCGGCTTCTCCTCCGCTATGGTCGTTCATCAAAAGTTCGTGGTGAAAATCCCAGAAGGGATGTCGCCGGAGCAGGCGGCGCCGCTACTGTGCGCCGGAGTGACTGTCTACAGTCCGCTGAGCCACTTTGGACTGAAACAGAGTGGCCTGAAAGGCGGAATTTTGGGGCTGGGCGGCGTTGGGCATATGGGTGTGAAAGTGGCGAAGGCTTTAGGCCACCACGTGACGGTGATAAGCTCTTCGGAGAAGAAGAGAGTGGAGGCTCTGGAGCACCTCGGCGCCGACGATTACTTGGTCAGCTCCGACCAGACTCAAATGGAACGAGCCATCGACTCGCTCGATTACATAATCGATACCGTCCCTGTTTCTCATCCTCTCGAGCCGTATCTCTCTCTTCTCAAACTCGACGGAAAATTGATCTTGATGGGTGTCATTAATACTCCATTGCAATTTGTTTCCCCTCTTCTCATGCTCGGGAGGAAGACGATCACAGGGAGCTTCATCGGAAGCATGTCGGAGACGCAAGAAGTGTTGGATTTCTTCAAGGAGAAGGAGCTGACCTCCATGATTGAAGTCATAAAGCTCGATTACATAAACAAGGCCTTGGAGAGGTTGGAGAAGAATGACGTCAGATACAGATTCGTCGTCGATGTCGCCGGAAGTAAGCTGCCTCAGTGA 990 50.91 MQNTGPEDVFIKVICCGVCHSDLHQIKNDLGMSNYPMVPGHEVVGEVVEVGSEVDRFRTGELVGVGCIVGSCSSCSPCNSDKEQYCNRRIWSYNDVYHDGRPTQGGFSSAMVVHQKFVVKIPEGMSPEQAAPLLCAGVTVYSPLSHFGLKQSGLKGGILGLGGVGHMGVKVAKALGHHVTVISSSEKKRVEALEHLGADDYLVSSDQTQMERAIDSLDYIIDTVPVSHPLEPYLSLLKLDGKLILMGVINTPLQFVSPLLMLGRKTITGSFIGSMSETQEVLDFFKEKELTSMIEVIKLDYINKALERLEKNDVRYRFVVDVAGSKLPQ 329
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 4564478 4568772 + Hsped.07g04420.1 Hepe07g0442 573837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g0442 329 Gene3D - 136 292 - -
Hepe07g0442 329 PANTHER ALDEHYDE REDUCTASE 3 324 IPR047109 GO:0009809(PANTHER)|GO:0016616(PANTHER)|GO:0016616(InterPro)|GO:0045551(PANTHER)
Hepe07g0442 329 SUPERFAMILY GroES-like 4 153 IPR011032 -
Hepe07g0442 329 Gene3D - 2 321 - -
Hepe07g0442 329 Pfam Zinc-binding dehydrogenase 163 286 IPR013149 -
Hepe07g0442 329 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 40 54 IPR002328 GO:0008270(InterPro)|GO:0016491(InterPro)
Hepe07g0442 329 Pfam Alcohol dehydrogenase GroES-like domain 5 123 IPR013154 -
Hepe07g0442 329 SMART PKS_ER_names_mod 3 320 IPR020843 GO:0016491(InterPro)
Hepe07g0442 329 FunFam Putative cinnamyl alcohol dehydrogenase 6 293 322 - -
Hepe07g0442 329 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 125 290 IPR036291 -
Hepe07g0442 329 FunFam Cinnamyl alcohol dehydrogenase 136 292 - -
Hepe07g0442 329 CDD CAD1 4 321 IPR047109 GO:0016616(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe07g0442 Hepe-Chr7:4564478 HepeContig67g0004 Hepe-ChrContig67:510515 2.77e-117 dispersed
Hepe02g0613 Hepe-Chr2:6372574 Hepe07g0442 Hepe-Chr7:4564478 7.35e-196 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g0442 K00083 - csv:101222395 560.066