Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g0446 ATGCAGCATCTTCCCCTGTTTTGGATCTTCAGTTTCTTTCTCCTTCTTCTTCTTCATTTTCCTTCTTTGGCTCTCAATGCCGATGCCACCCTCTTGATTTCTCTCAAACGCTCCATTCTCCGCGATCCCTTCTCTGTTTTCTCTAATTGGAATTTCAACGACGACACCCCCTGTTCTTGGCGTGGAGTCACCTGCACCGACCTTCAAACCTACGGCGGCGGCTGGACGGATTTCCGACGAGTCACTGCCGTCGCCCTTCCCGCCAGCCAGCTTCTGGGTTCCATTCCTGACGAGCTTGGAAGGATCGAACACCTTCGTCTTCTCGATCTTTCTGGTAATTTCTTTAATGGGTCTCTGCCGATTTCCATTTTCAATGCTTCGGACCTTCAGATTCTTTCGCTTTCCAACAATGTTATCTCCGGCGAGTTGCCGGCGGATATTGGGGGTTTGAGGAGTCTTCAGGTTTTGAATCTGTCTGATAATGCGTTGGCCGGTGAAGTGCCGGGAAATCTCACTGCGTTGAAGAATCTCACCGTTGTTTCTCTGAGGAGTAATTATTTTGCCGGAAAAATTCCGGGGAATTTCAGTTTGGTTGAGGTTTTGGATCTGTCGTCTAATTTGTTCAATGGGTCTCTCCCGGCGGATTTTGGTGGGGAGAAATTGCGGTATTTGAACTTCTCTTACAATAAAATTTCAAGTCCGATTCCGTTGGAGTTCGCTAAGAGGATCCCGGCGAATGCGACGATGGATCTCTCTTTCAATAATCTGACCGGAGCAATTCCTCAGTCGATTGCTCTGCTCAGCCAGAAAACAGAGGCGTTCGCCGGGAATGAAGATCTCTGCGGGAAGCCATTGAAGCATCTCTGTTCGATTCCTTCTTCACTCACAACTCCCCCAAATGTTTCTGAAACTTCTTCTCCGGCTATCGCCGCCATACCAAAAACAATCGGCTCTATTCCGGCTACCCAGTCCCCCGGAGGTCCAAACGGGACACAAACTCCTCAGCCGCAAAACGCCATGAAACCCATCACAATAGCTGCTATCGCCGTCGGAGACCTCGCCGGAATCGCCATTCTCGCCGTCGTGATTCTCTACGTCTACCATCATCGGAAACAAAAAAATCCCAATTCCAAAACCGCTAAACCGGCCGAGAAGAACCCGCCAATTAGCTCAGAACAGAACCCCCAAAACAATCAGAAAAAACCCTCGTCGGTACTGTTCTGTTTGCCCAACAATGGCGAAGAGACATCGGAGGCGACGAGTTCCTCCGACGGCGAAGAACAGAGAGAAAAATCCGGGAAAACCCACGGCGGAGGGAACATAGAGAGTAAGAAAAATGGGGTGCTAATGACGGTGGACGGAGAAACGGAGCTCGAATTGGAGACACTGTTAAAGGCGTCGGCGTATATACTCGGAGCGAGTGGCGGGAGCATTGTGTACAAGGCTGTGCTGGAGGACGGCACGGCGTTCGCCGTCAGAAGGATCGGCGACAGCGGCGTTGATAAATTGAGGGATTTTGAGACCCAAGTGAGAGGCATTGCTAAACTTCGACATCAAAATTTGGTGAAAATTCGAGGCTTCTTTTGGGGAGAAGATGAGAAACTCGTCATCTATGACTATGTCTCCAATGGCTGCCTTGCAACCTCCATTCACAGAAAACCGAGCTCATCGTCTTCTTCCCAGAGCCACCTACCATTCGAAATCCGACTGAAAATCGCCAGAGGAATCGCCCGAGGACTGGCCTTCATCCACGACAAGAAGCAAATCCATGGCAACCTCAAGCCCTCCAACATCCTCCTCAACGCCGACATGGAGCCTTTAATCACCGATCTCGGCCTCGACAAGCTCCTCTCCGGCACTTCCAAACTCGCCCTCGCTTCCGGTTCAGCCCGGAACTTAGGCAGCCACAGATCCACGCCCAATCGTGAGCAGAACCACCACCAAGACGGCGGGGGCGGAAGCCCGGCAGTGAGCGCGGGATCGGCGTACCAGGCGCCGGAATCGCTGAAGAATGTGAAAGCGAGCCCTAAATGGGACGTGTACTCGTTCGGGGTGATTCTGGTGGAGATTCTGAGCGGGAGAACGGCGACGGAGAGGGAGGTGAGTCAGTGGAGTGGCGGTGAGGAAGAGGGGCGGATGAAGAAGATGATCGATTCGGCGATTAGAGGAGAATTGGAAGGGAAAGAAGAGGCGGCGATTGGGATATTGAGATTAGGGTTTAGCTGTGTTTGTTTTGTGCCTCAAAAGAGACCCACTATGAAAGAGGCACTCCAAATTCTTGACAAAATCTCTTCCACCATGGATTAA 2307 51.32 MQHLPLFWIFSFFLLLLLHFPSLALNADATLLISLKRSILRDPFSVFSNWNFNDDTPCSWRGVTCTDLQTYGGGWTDFRRVTAVALPASQLLGSIPDELGRIEHLRLLDLSGNFFNGSLPISIFNASDLQILSLSNNVISGELPADIGGLRSLQVLNLSDNALAGEVPGNLTALKNLTVVSLRSNYFAGKIPGNFSLVEVLDLSSNLFNGSLPADFGGEKLRYLNFSYNKISSPIPLEFAKRIPANATMDLSFNNLTGAIPQSIALLSQKTEAFAGNEDLCGKPLKHLCSIPSSLTTPPNVSETSSPAIAAIPKTIGSIPATQSPGGPNGTQTPQPQNAMKPITIAAIAVGDLAGIAILAVVILYVYHHRKQKNPNSKTAKPAEKNPPISSEQNPQNNQKKPSSVLFCLPNNGEETSEATSSSDGEEQREKSGKTHGGGNIESKKNGVLMTVDGETELELETLLKASAYILGASGGSIVYKAVLEDGTAFAVRRIGDSGVDKLRDFETQVRGIAKLRHQNLVKIRGFFWGEDEKLVIYDYVSNGCLATSIHRKPSSSSSSQSHLPFEIRLKIARGIARGLAFIHDKKQIHGNLKPSNILLNADMEPLITDLGLDKLLSGTSKLALASGSARNLGSHRSTPNREQNHHQDGGGGSPAVSAGSAYQAPESLKNVKASPKWDVYSFGVILVEILSGRTATEREVSQWSGGEEEGRMKKMIDSAIRGELEGKEEAAIGILRLGFSCVCFVPQKRPTMKEALQILDKISSTMD 768
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 4599220 4604947 + Hsped.07g04460.1 Hepe07g0446 573841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g0446 768 Pfam Leucine rich repeat N-terminal domain 25 66 IPR013210 -
Hepe07g0446 768 FunFam Probable leucine-rich repeat receptor-like protein kinase At2g33170 25 190 - -
Hepe07g0446 768 SUPERFAMILY L domain-like 28 287 - -
Hepe07g0446 768 SUPERFAMILY Protein kinase-like (PK-like) 470 762 IPR011009 -
Hepe07g0446 768 Pfam Protein kinase domain 471 758 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g0446 768 MobiDBLite consensus disorder prediction 422 438 - -
Hepe07g0446 768 PANTHER OS05G0588300 PROTEIN 174 764 IPR050994 -
Hepe07g0446 768 Gene3D Transferase(Phosphotransferase) domain 1 541 768 - -
Hepe07g0446 768 MobiDBLite consensus disorder prediction 628 660 - -
Hepe07g0446 768 ProSiteProfiles Leucine-rich repeat profile. 220 241 IPR001611 GO:0005515(InterPro)
Hepe07g0446 768 MobiDBLite consensus disorder prediction 379 419 - -
Hepe07g0446 768 Pfam Leucine Rich Repeat 199 217 IPR001611 GO:0005515(InterPro)
Hepe07g0446 768 Pfam Leucine Rich Repeat 220 240 IPR001611 GO:0005515(InterPro)
Hepe07g0446 768 ProSiteProfiles Protein kinase domain profile. 465 767 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g0446 768 Pfam Leucine rich repeat 104 163 IPR001611 GO:0005515(InterPro)
Hepe07g0446 768 MobiDBLite consensus disorder prediction 317 337 - -
Hepe07g0446 768 Gene3D Ribonuclease Inhibitor 196 291 IPR032675 -
Hepe07g0446 768 Gene3D Ribonuclease Inhibitor 25 195 IPR032675 -
Hepe07g0446 768 FunFam Leucine-rich repeat receptor-like protein kinase 197 291 - -
Hepe07g0446 768 Gene3D Phosphorylase Kinase; domain 1 439 540 - -
Hepe07g0446 768 MobiDBLite consensus disorder prediction 373 448 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe07g0446 Hepe-Chr7:4599220 Hepe08g1156 Hepe-Chr8:11715598 3.57e-178 dispersed
Hepe07g0446 Hepe-Chr7:4599220 Hepe01g1165 Hepe-Chr1:76776293 4.02e-81 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72915 PF00069 Pkinase 1.20E-30 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g0446 - - - 0.0