Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g0449 ATGGCTTTACATCGCTTTGAACAATCCGACGATGAACCCCAAACCCATTTGTTCCCTCTCGATTCTCTGTTTTGCGAGGAGGAGAAATGGGAGGATGATGAAGCTGATGAAGCTGATGAGTTATTAGAACAAACCCATCAGACCCATCTCTTTTCTTTGGGTTCTTTTGAGGAAGATCTCTCCGGGGAAGATGAACGACTTCTCTCCATGTTGTCTAAGGAAACAGAGCAGCTGAAACAGAGCAATCTCAAGCTTCAAGCTCTGTTGATGGATCCTTCTGTCTCTGCTGCTCGTTCTTCAGCTGTGGAATGGATGCTCAAAGTCAAATCCCATTATGGGTTCTCAACTCTCACTGCAATTTTGGCCGTTTCTTATTTCGATAGGTTCCTCTTGAGCTTTCATTTTAGGAGTGACAAACTCTGGATGAACCAGCTTGTGGCTGTTACTTGCCTTTCCTTGGCGGCGAAAGTGGAGGAGATTCAAGTTCCTCTTCTGCTGGACCTTCAAGTTGAGGATGCGAAATATGTGTTTGAGGCCAAAACCATTCAGAGAATGGAGCTTCTAGTGCTCTCAACTCTTCAATGGAGGATGCATTTGGTGACTCCATATTCATTTTTTGATCACATTGTAAAGAGGCTTGGGTTAAAAAACAGTCTTCACTTGGAGTTTTTCAGGCGTTCTGAGCACCTTCTCCTCTCTCTACTTTCAGATTCAAGATTTGTGGGTTATCTTCCATCTGTCTTGGCAACTGCAACAATGATGGAGGTGATAGATCAAATTGAGCCTCTTAAGTCATTAGAGCACCACGATCAGCTTCTGGGTGTCCTCAAAACGAACAAGGAAAAAGTGCAATGCTGTTACAATCTTGTTGTGGAGTATTCAAAGGCCTATAACAATGGCTTTTATTACAATCCCAACAACCCCCACAAGCGCAAGCATGAACAGCAAGCTCCTGATAGCCCAAGTGGAGTGATTGATGCTGGTTTCAGTTCAGACAGCTCCAATGATTCTTGGGCATTGAGAGCAGCATCAATTTGTTGTTCTTCATCACCTGAACCTTCTTTCAAGAAGAGCAAAACTACTGAAGAGCCAAAGATGAAATTTCATTCTCTTAACAGGGTGTTTTTGGACATTGTTGGCAGCCCTTCTTAA 1152 43.4 MALHRFEQSDDEPQTHLFPLDSLFCEEEKWEDDEADEADELLEQTHQTHLFSLGSFEEDLSGEDERLLSMLSKETEQLKQSNLKLQALLMDPSVSAARSSAVEWMLKVKSHYGFSTLTAILAVSYFDRFLLSFHFRSDKLWMNQLVAVTCLSLAAKVEEIQVPLLLDLQVEDAKYVFEAKTIQRMELLVLSTLQWRMHLVTPYSFFDHIVKRLGLKNSLHLEFFRRSEHLLLSLLSDSRFVGYLPSVLATATMMEVIDQIEPLKSLEHHDQLLGVLKTNKEKVQCCYNLVVEYSKAYNNGFYYNPNNPHKRKHEQQAPDSPSGVIDAGFSSDSSNDSWALRAASICCSSSPEPSFKKSKTTEEPKMKFHSLNRVFLDIVGSPS 383
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 4631947 4634042 - Hsped.07g04490.1 Hepe07g0449 573844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g0449 383 SMART cyclin_7 103 191 IPR013763 -
Hepe07g0449 383 Gene3D - 80 198 - -
Hepe07g0449 383 FunFam CYCLIN D32 199 288 - -
Hepe07g0449 383 MobiDBLite consensus disorder prediction 305 326 - -
Hepe07g0449 383 Pfam Cyclin, N-terminal domain 71 197 IPR006671 -
Hepe07g0449 383 ProSitePatterns Cyclins signature. 98 129 IPR048258 -
Hepe07g0449 383 FunFam D3-type cyclin 91 198 - -
Hepe07g0449 383 SMART Cyclin_C_2 200 336 IPR004367 -
Hepe07g0449 383 CDD CYCLIN_AtCycD-like_rpt2 200 290 - -
Hepe07g0449 383 Pfam Cyclin, C-terminal domain 200 300 IPR004367 -
Hepe07g0449 383 CDD CYCLIN_AtCycD-like_rpt1 97 195 - -
Hepe07g0449 383 PANTHER CYCLINS 49 292 IPR039361 GO:0000079(PANTHER)|GO:0000307(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0016538(PANTHER)|GO:0044772(PANTHER)
Hepe07g0449 383 Gene3D - 69 288 - -
Hepe07g0449 383 SUPERFAMILY Cyclin-like 64 198 IPR036915 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe07g0449 Hepe-Chr7:4631947 Hepe10g0446 Hepe-Chr10:5063334 1.29e-43 dispersed
Hepe01g1799 Hepe-Chr1:83023714 Hepe07g0449 Hepe-Chr7:4631947 5.52e-80 wgd
Hepe02g0604 Hepe-Chr2:6278705 Hepe07g0449 Hepe-Chr7:4631947 2.45e-85 wgd
Hepe04g1270 Hepe-Chr4:68234676 Hepe07g0449 Hepe-Chr7:4631947 3.30e-81 wgd
Hepe07g0449 Hepe-Chr7:4631947 Hepe08g1303 Hepe-Chr8:14698500 3.60e-94 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g0449 K14505 - csv:101221213 604.749