Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g0462 ATGGCGGCGATGGTACTGAGCAGAGCTTTGTTTCTATTGGGTTTTCTTCTATTTCTTCAAATGCAGCTTCCTGAAACAATGGCGGATTGCCCCTTGGACTTGAGTGGATCAAACTTTACTTTAGCTGCCTCTATTTGCTCTAACCCCACTGAAAGAGGGAAGTGCTGCCGTTATATCAATGCATTTGTTGCAGTTTCTGTTGCTCAGCTTGCAAATGCAACAGGTGAACTGGGAGTTTCTTCAAACTTATCTAACATTTGCCTGCAATCAATATTTCAAACCATGGGACTGTATGGAGTTCCTAGAAATGCCACGGTTTTCTGTGGGGTTGGAACAAAAATTCCAGTGAATTACGCGTGTAGAGGCCGAGAAACCGTCACACAGATGCTGGAATCTCCAAAATTTACAAATGTCAGTGGAAATTGCCATTTACCGCTCACGGAGGAGAGTACTTGTAAGAAGTGTATCAATGCTGGGATTTTATATCTCCGCAATCTGATTGGAAGAGAAGATAATATAACGTTAAATACTTGTCGCGACGCTACGTTTGTTGCACTTGCTAGCCAACTTGATCCTGCTTCAGTCATTGATCTTGCAACCTGCTTCTTTGGAGTTCAAGGCCTTATCAGACCTCCAGCTCCTTCCCCATCTTTGGCTACACCAGATATTTCCCCAAGTCCATCAGCTGCCGCAAGTCCGGGACCACTGACGCTAGGTGTTTCTGATGATAAAAGTCATCAACATCATTCCTACCATCTAACATTAGTGGCGGGTATTGGCATTGCGGTGACTGTAGTTTCTGTAATGATGCTTGTTGTCTTGATTGTGCTGATACGAAGGAAAAACAGAGAGCTAAAGGATTCTGAAAAGATGGATGTCAACTCTTCAAAATCCTTCCCTTCTCGTCCCATCAAAAAGTATCAGGAAGGACCTTCTATGTTTAAAAAATTCAGCTATAAGGAGATCAAGAAGGCAACAGATAGTTTTAGTACAACAATTGGACAAGGAGGATACGGAACTGTTTATAAAGCTCAATTCCGTGATGACTTAGTGGTAGCTGTGAAGAGGATGAACAAAGTCTCTGAGCAGGGGGAGGACGAATTTGGCAGAGAAATAGAGCTGCTTGCGAGATTACATCACCGACATCTTGTTGCTTTAAGAGGTTTCTGTGTTGACAAGCATGAACGGTTTCTTGTGTACGAGTATATGGCTAATGGAAGCTTGAAGGATCATCTTCATGCTCCTGGCAGGACCCCTCTAAGTTGGCGGATGAGAATCCAAATTGCCATCGATGTAGCCAATGCTCTGGAGTACCTTCACTATTATTGTGATCCCCCACTGTGCCATAGAGACATTAAGTCCAGCAACATTTTACTGGATGAAAACTTTGTTGCTAAGGTTGCTGATTTTGGCCTTGCGCATGCTTCAAAGGGCGGTTCTGTTTTCTTTGAACCCGTAAATACTGATATCCGAGGAACGCCAGGTTATATGGATCCTGAGTACGTTATCACGCAAGAGCTTACTGAGAAAAGTGATATATACAGCTACGGCGTGCTGCTTCTGGAAGTAGTTACTGGCAGACGTGCGATACAAGATGGGAAAAATTTGGTTGAATGGTCCCAGGCGTACATGATTTCAGATTTGAGGATATCTGAACTAGTAGATCCAAGCATCAAGAGTTCTTTCAACTTGGACCAACTTCACACGGTCGTGTCTATTGTGAGATGGTGCACCGAGGGAGAAGGCAGGGTGAGGCCCTCGATTAAACAAGTGCTTCGACTATTGTACGAGAGTTCGGATCCAATGCATCAAGGGCTTGTAGAAGCTGTTGATGATGAAGAATATGGAGGCACTGAAGGGAGACAGAGCATGAGCAAGAGAAAAATGCATAAAAGTGATGTGATTTTTCACAGTGGAGATGGAAGGTGTCTTGCTTCTTCATCAAGCACATCTAGGTCATATTGTAGTAGAAGTTTTTTGCTTGAAACTGGTTCACCACAGTCTCCTCCCAATATTTTGTCTGTCTCAGATCAATTGTTTTAG 2043 43.42 MAAMVLSRALFLLGFLLFLQMQLPETMADCPLDLSGSNFTLAASICSNPTERGKCCRYINAFVAVSVAQLANATGELGVSSNLSNICLQSIFQTMGLYGVPRNATVFCGVGTKIPVNYACRGRETVTQMLESPKFTNVSGNCHLPLTEESTCKKCINAGILYLRNLIGREDNITLNTCRDATFVALASQLDPASVIDLATCFFGVQGLIRPPAPSPSLATPDISPSPSAAASPGPLTLGVSDDKSHQHHSYHLTLVAGIGIAVTVVSVMMLVVLIVLIRRKNRELKDSEKMDVNSSKSFPSRPIKKYQEGPSMFKKFSYKEIKKATDSFSTTIGQGGYGTVYKAQFRDDLVVAVKRMNKVSEQGEDEFGREIELLARLHHRHLVALRGFCVDKHERFLVYEYMANGSLKDHLHAPGRTPLSWRMRIQIAIDVANALEYLHYYCDPPLCHRDIKSSNILLDENFVAKVADFGLAHASKGGSVFFEPVNTDIRGTPGYMDPEYVITQELTEKSDIYSYGVLLLEVVTGRRAIQDGKNLVEWSQAYMISDLRISELVDPSIKSSFNLDQLHTVVSIVRWCTEGEGRVRPSIKQVLRLLYESSDPMHQGLVEAVDDEEYGGTEGRQSMSKRKMHKSDVIFHSGDGRCLASSSSTSRSYCSRSFLLETGSPQSPPNILSVSDQLF 680
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 4773982 4778471 + Hsped.07g04620.1 Hepe07g0462 573857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g0462 680 SUPERFAMILY Protein kinase-like (PK-like) 308 596 IPR011009 -
Hepe07g0462 680 SMART serkin_6 327 602 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g0462 680 PANTHER OS01G0750732 PROTEIN 200 633 IPR050885 -
Hepe07g0462 680 ProSiteProfiles Protein kinase domain profile. 327 606 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g0462 680 ProSitePatterns Serine/Threonine protein kinases active-site signature. 447 459 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe07g0462 680 FunFam Putative receptor-like protein kinase 296 402 - -
Hepe07g0462 680 Pfam Protein kinase domain 330 593 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g0462 680 Gene3D Phosphorylase Kinase; domain 1 290 402 - -
Hepe07g0462 680 FunFam Putative receptor-like protein kinase 403 603 - -
Hepe07g0462 680 Pfam SPARK 28 168 IPR043891 -
Hepe07g0462 680 CDD STKc_IRAK 333 595 - -
Hepe07g0462 680 MobiDBLite consensus disorder prediction 216 243 - -
Hepe07g0462 680 ProSitePatterns Protein kinases ATP-binding region signature. 333 355 IPR017441 GO:0005524(InterPro)
Hepe07g0462 680 Gene3D Transferase(Phosphotransferase) domain 1 403 614 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe06g1399 Hepe-Chr6:64221884 Hepe07g0462 Hepe-Chr7:4773982 2.11e-52 dispersed
Hepe07g0462 Hepe-Chr7:4773982 Hepe02g3246 Hepe-Chr2:82026244 1.17e-67 dispersed
Hepe08g0189 Hepe-Chr8:1711255 Hepe07g0462 Hepe-Chr7:4773982 1.03e-57 dispersed
Hepe07g0462 Hepe-Chr7:4773982 Hepe08g1024 Hepe-Chr8:9837175 7.04e-71 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72916 PF00069 Pkinase 1.30E-49 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g0462 - - - 0.0