Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g0482 ATGGAGATTGATCTATCACTGAAAATAGATCATCACAAGCAAGAATGGAAAGAAAAAAGTAGACAAAAAACAGATGAAGAAAAGCAAGAGGAACAAGATGATGAAGATGATCATCAACAACCTCAAGAAAAACAAAAAGAAAAAATGGGAATTGAAGCTGAAATTGATTTTGTTGCTGCTTCTGGTTTGAAAGTGTTTTTGCCACACAACACTAATGCAGGAGAGATTTCGGAGTTGCATATCGAGATGGATCGAATGAAGGAAGAGAACAAATTGTTGAGAAGAGCAGTGGAACAAACAATGAAAGATTATTATGATCTTGAAATGAAAATTGGTATCATCCAACAAAACAATCTCTACAAGAAGAATTCCCACAACTTTCTATCATTCCATGGAAATGAGAATAACAAGAGGCATGAAGAACGAAAACGAGACGTCGAACTCGGAGAAATGGCAAAGAAGAGACGAGTTCGGTCGCCATCGAAGGAGGACGAAATGAGGGAGAGTGAACTAGGGCTATCATTAGGGCTGCATACAAACAATAATAATGATTTGGAACAAGATCATCATCATCATAATCATAGGGAATTAGTAGAAGAAACAAGAGAAAAGAACAACAAAGAAGATGAAACATCCAACTTCAACTCAATCCAAAACAAGCCACAAATAAGGCCTGAGTTGCAAGCAATGGCACCCCCACAAAACAGAAAAGCTAGGGTTTCTGTCAGAGCAAGATGTGAAGCTGCCACAATGAATGATGGTTGCCAATGGAGGAAATATGGTCAGAAAATTGCAAAAGGAAATCCATGTCCTCGAGCCTACTATCGATGCACAGTTGCACCAGGATGCCCAGTTAGAAAGCAGGTACAAAGATGCTTAGAAGACATGTCAATTCTGATAACAACGTACGAAGGAACACACAACCATCCTCTCCCTGTGGGGGCCACAGCCATGGCTTCAACAGCTTCTGCAGCAACTTCCTTTATGCTATTAGACTCTACTTCTAATCTCTCCCTTCCAAACCCTCAAAACCCTAATATTCTAAACTCGTCTTCGTTTTCTCCAATCTTGTTCGGCGCTGCAAACCCTAACGAACCCTCGAAAGGGCTCGTCGTCGACCTCTCAAGCAACAACTTTTACAGCTCAAGGCCGAGCTCTTCAAGCTCCGAGTTGGCCCAATCATCAAATTGGATGAAAATGAACGGTCATTCGTATTACCAAAGGACGAATAACTTTCAAGCTAATCTTTTGAGTCCCTTTGATGGGCGGAATTGGAAAGCGGCGGAGGATAATAAGCCGCCGTTGACCGCGGAGAGTGTGTCCGCCATTGCTTCTGACCCTAAGTTTCGAGTCGCCGTGGCGGCCGCCATTTCGTCGCTCATTCACAAAGAGAACAACCACAGGACCGCGCATCCGGTCGAACATTCTTCTTTAGGTCCCAATAAGGATAGCGAAGGCGGCGGTGGCGGTGGCGGTGGCGGTGGCGATAACGGCGGCGGAAACAAGAAATGGGTTGTTGAGTCACTCTCAACGAATGGTAACTAA 1545 43.62 MEIDLSLKIDHHKQEWKEKSRQKTDEEKQEEQDDEDDHQQPQEKQKEKMGIEAEIDFVAASGLKVFLPHNTNAGEISELHIEMDRMKEENKLLRRAVEQTMKDYYDLEMKIGIIQQNNLYKKNSHNFLSFHGNENNKRHEERKRDVELGEMAKKRRVRSPSKEDEMRESELGLSLGLHTNNNNDLEQDHHHHNHRELVEETREKNNKEDETSNFNSIQNKPQIRPELQAMAPPQNRKARVSVRARCEAATMNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPGCPVRKQVQRCLEDMSILITTYEGTHNHPLPVGATAMASTASAATSFMLLDSTSNLSLPNPQNPNILNSSSFSPILFGAANPNEPSKGLVVDLSSNNFYSSRPSSSSSELAQSSNWMKMNGHSYYQRTNNFQANLLSPFDGRNWKAAEDNKPPLTAESVSAIASDPKFRVAVAAAISSLIHKENNHRTAHPVEHSSLGPNKDSEGGGGGGGGGGDNGGGNKKWVVESLSTNGN 514
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 4957862 4961739 - Hsped.07g04820.1 Hepe07g0482 573877
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g0482 514 MobiDBLite consensus disorder prediction 464 514 - -
Hepe07g0482 514 MobiDBLite consensus disorder prediction 130 216 - -
Hepe07g0482 514 SMART WRKY_cls 251 311 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe07g0482 514 MobiDBLite consensus disorder prediction 1 47 - -
Hepe07g0482 514 MobiDBLite consensus disorder prediction 183 210 - -
Hepe07g0482 514 FunFam probable WRKY transcription factor 31 236 313 - -
Hepe07g0482 514 SUPERFAMILY WRKY DNA-binding domain 244 312 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe07g0482 514 Gene3D WRKY domain 236 313 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe07g0482 514 ProSiteProfiles WRKY domain profile. 246 312 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe07g0482 514 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 31 468 IPR044810 GO:0003700(InterPro)
Hepe07g0482 514 MobiDBLite consensus disorder prediction 1 28 - -
Hepe07g0482 514 Pfam WRKY DNA -binding domain 252 310 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe07g0482 514 Coils Coil 13 33 - -
Hepe07g0482 514 Coils Coil 76 103 - -
Hepe07g0482 514 MobiDBLite consensus disorder prediction 132 171 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe07g0482 Hepe-Chr7:4957862 Hepe07g2287 Hepe-Chr7:67198609 9.01e-43 dispersed
Hepe07g0482 Hepe-Chr7:4957862 Hepe09g0135 Hepe-Chr9:1069494 2.72e-47 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
55906 PF03106 WRKY 2.10E-24 CL0274 Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g0482 - - - 0.0