Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g0502 ATGATGAAGATTTTCATTATCTTCCTTCTTCTCTGTTGTTTACTCTCTGTAACTTCAGCCGCCACTTGCCCCATGGACCTCAATTATGTCCTCAGAATCCCCTGGAATTCGACTGATTGCCGAAACCCCTTCTTCCAAATCACTGCCAAAGCCACCATGGATGATACCTCAAAATTCCCTTGTTGTCAAACCCTTTTGTCCTTGTATGGAATTGCTCTTGCCCAACACCTCAAAGAAACCTCTCTTTTCAACCTCCCAGACCTCGAAACCTCCAGTTCTTGCCTTCGCGATTACCAATCGAAGCTCTCTTCGCTCTCCCTTCCCGGTGACCTACTTTCCCATTGCTTCGATCCTTTGCAATTTGTGATCTCTGATAATGTATGTGCAGGTATTCAAACTACTCGAGATTGGGTTTCCAAACTTGGCCGGAACTCGCCGCTCGATTCTGGGTGTCGATCGGAACTTGCCGGTCCTAGTTGTGATGCTTGTCTCGCTGCTGGTTTCAAAGTTCAGTCCATTTTGACTGGAATTGATGGTAATAAATCTCATTCTATGGATTGCTTTTACTTTGCTGTTCTTTATGCTGCTGGCATTGTGAATGAGTTTGGCCCTGAGGGTCGTAGCGCGTTGGGTTGCATCTTTAATTTGCAATTGAGTACTGAAAATGATTCGAAAAGTAAGCATCCTGCTCTAGTTTATGGCCTTACTGCTGCTGCTGTTGGAACTTTGGTTATTTTTGTTCTGTTGGGAATAGGATTTTGGTTTTACAAATGGAAAAAATTGGCTAAGAAGTCTAGTTTAGAGTTTGATGTGGAGCTGGATGAACAGGGGTCTAGGCCACATGCCAGGCCAAATACTGGATCAATTTGGTTCAAGATTCAGGAGCTTGAGAAGGCAACTGATAACTTTTCTCCGAAAAACTTCATTGGGAGAGGTGGGTTTGGTTTAGTTTACAAAGGGACATTACCTGATGGAAGTATGGTGGCAGTCAAGAAAGTGATTGAATCAGATTTTCAGGGCAATGCAGAGTTTTGCAATGAGGTTGAAATCATCAGTAATTTGAAGCACAGGAATCTTGTTCCACTTAGAGGTTGTTGTGTGATTGATGGGGATGATGGCTATGATGAGAGAGGAAGTGAGAGATACCTTGTTTATGATTACATGCCGAATGGAAATCTCGATGATCATTTGTTCCTTACACCATTTGATCAAGTTGGAACTGTGAAAAAATCACTGACATGGCCTCAAAGGAAGAATATTATCTTGGATGTGGCTAAAGGCTTAGCTTATCTGCACTATGGAGTGAAACCTTCCATATATCACAGAGATATCAAGGCGACAAACATATTGCTAGATGCAGATATGAGAGCAAGAGTGGCAGATTTCGGGCTCGCCAAACAGAGCAGGGAAGGACAGTCTCATCTTACAACTCGAGTTGCAGGAACTCATGGGTATTTAGCACCCGAATATGCGCTTTATGGACAACTAACTGAGAAGAGTGATGTTTATAGCTTTGGAGTAGTTGTTTTGGAGATAATGTGCGGGAGAAAAGCCCTTGATTTCTCTTTGTCGTCATCACCGCGCGCATTCCTGATTACTGATTGGGCTTGGTCCTTGGTGAAAGCTGGAAAAATAGGGGAGACTCTAGATCTTTCTCTGCTAAAAGATGGAGATTCTTCTAATTCAAATCCAAAAGCCATAATGGAGAGGTTCGTTGCGGTTGGAATTTTATGTTCTCATGTGATGGTGGCTTTAAGGCCTACCATAATGGACGCTCTGAAAATGTTGGAAGGTGACATTGAAGTCCCCCAAATATCTGATCGGCCAGTGCCTTATGGGCATCCTTCGTTTGCTGGCGATGGCAGCAACTTCAGTATATCACCAACATTGAGCGGGCTTCAATTGCGTAGCGGCGACATGCTCAGATGA 1929 43.55 MMKIFIIFLLLCCLLSVTSAATCPMDLNYVLRIPWNSTDCRNPFFQITAKATMDDTSKFPCCQTLLSLYGIALAQHLKETSLFNLPDLETSSSCLRDYQSKLSSLSLPGDLLSHCFDPLQFVISDNVCAGIQTTRDWVSKLGRNSPLDSGCRSELAGPSCDACLAAGFKVQSILTGIDGNKSHSMDCFYFAVLYAAGIVNEFGPEGRSALGCIFNLQLSTENDSKSKHPALVYGLTAAAVGTLVIFVLLGIGFWFYKWKKLAKKSSLEFDVELDEQGSRPHARPNTGSIWFKIQELEKATDNFSPKNFIGRGGFGLVYKGTLPDGSMVAVKKVIESDFQGNAEFCNEVEIISNLKHRNLVPLRGCCVIDGDDGYDERGSERYLVYDYMPNGNLDDHLFLTPFDQVGTVKKSLTWPQRKNIILDVAKGLAYLHYGVKPSIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVVLEIMCGRKALDFSLSSSPRAFLITDWAWSLVKAGKIGETLDLSLLKDGDSSNSNPKAIMERFVAVGILCSHVMVALRPTIMDALKMLEGDIEVPQISDRPVPYGHPSFAGDGSNFSISPTLSGLQLRSGDMLR 642
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 5285970 5288721 + Hsped.07g05020.1 Hepe07g0502 573897
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g0502 642 SMART serkin_6 303 596 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g0502 642 Pfam Protein kinase domain 306 519 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g0502 642 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 388 604 - -
Hepe07g0502 642 FunFam probable receptor-like protein kinase At1g11050 263 387 - -
Hepe07g0502 642 ProSitePatterns Serine/Threonine protein kinases active-site signature. 439 451 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe07g0502 642 SUPERFAMILY Protein kinase-like (PK-like) 281 597 IPR011009 -
Hepe07g0502 642 Gene3D Transferase(Phosphotransferase) domain 1 388 606 - -
Hepe07g0502 642 ProSiteProfiles Protein kinase domain profile. 303 572 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g0502 642 Pfam SPARK 19 188 IPR043891 -
Hepe07g0502 642 Gene3D Phosphorylase Kinase; domain 1 268 387 - -
Hepe07g0502 642 ProSitePatterns Protein kinases ATP-binding region signature. 309 332 IPR017441 GO:0005524(InterPro)
Hepe07g0502 642 PANTHER OS01G0750732 PROTEIN 39 605 IPR050885 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g1593 Hepe-Chr1:81241146 Hepe07g0502 Hepe-Chr7:5285970 4.70e-195 dispersed
Hepe03g1963 Hepe-Chr3:76764967 Hepe07g0502 Hepe-Chr7:5285970 1.74e-106 dispersed
Hepe07g0502 Hepe-Chr7:5285970 Hepe09g0235 Hepe-Chr9:2049108 1.41e-75 dispersed
Hepe07g0502 Hepe-Chr7:5285970 Hepe07g1830 Hepe-Chr7:61087546 8.23e-77 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72917 PF00069 Pkinase 1.20E-42 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g0502 - - - 0.0