Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hepe07g0504 | ATGAAGATGAATTCCCCTCACTGGCTCGGGACGGCGGCCGAGAAAGACGATGGGAGTGAGAAGAAGAAGGAAGAGAAGCACGGGAGCGAAGAGGAGGAGGACGACGACGACAGCGACATGCCGGCGACGTTGAGCCTTAGAGAGCTTTCAAAGGTTATACTTCCACCTTTGGGAGTTTCAAGCTGTAATGAGGATGGTGGTAATCAAGTTAAGTCCAATAACAAATGGATCATCTCTCCCATGAGCTCTAGATACAGGTGGTGGCAGTCGTTCATGGTGGTTTTGGTTGCTTACTCGGCGTGGGTTTACCCATTGGAAGTGGCGTTTGTAGACGCAATTCCCAAACCAGGATTATTAATTGCAGACAACATTGTCGATCTCTTCTTCGCCATTGACATCTTCTTCACCTTCTTCGTTGCTTACATTGATCCTCGCACTCAGCTTCTCGTTCGTGATTCTAAGAAGATCGCTATCAGGTACTTGTCAACATGGTTCTTGATGGATTTGGCATCAACAATCCCATTTGAGACACTGGCCTATCTGGCCACAGGCAAATATGATGTTGGTCTCTCTTATGCACTCCTGGGATTGCTCAGATTTTGGCGACTGCGACGTGTCAAGCAATTTTTCACTAGGCTTGAGAAGGACATTAGATTCAGCTACTTTTGGGTTCGATGTGCTAGGCTTCTATCTGTTACATTGTTTTATGTCCATTGTGCCGGATGCCTCTACTACTTGTTGGCTGACCGATACCCAAATGAAGGACAGACCTGGATCGGAACCGCGTTGCCGAATTTCAAAGAGATTAGCCTTGGAGTGAGATATGTTTCAGCATTGTATTGGTCTGTCACCACGATGACCACTGTTGGTTATGGTGATCTTCATGCTGTGAACACCGTAGAGATGATCTTTATCATTTTCTACATGCTCTTCAACCTCGGTTTAACTGCTTACTTGATCGGTAACATGACAAACTTAGTCGTTGAAGGAACTCGTCGCACAATGGAATTTAGAAACAGCATCGAAATGGCATCAAATTTCGTTAACCGAAACCGCCTGCCTTCGAGGTTGAAGGAACACATATTAGCATACATGTGCTTGAGATTCAAGGCCGAGAGCCTAAACCAACAACATCTGATCGAACAGCTTCCAAAGTCGATTTGCACAAGCATCTGTCAGCAATTGTTTTTGCCAACTTTGGAGAAAGTCTACCTCTTCAAGGGTGTCTCAAAGGAAACACTTGTGCTGCTGGTAGCGAAGATGAAAGCTGAGTATATACCGCCTAAGGAGGACGTGATATTACATAACGAAACCCCCGATGAAGTTTATATCATTGTGTCCGGGGAAATCGAAATTATTGACTGCGATAGGGAGGTGGAACGGATTGTTGGGACGTTACATCGTGGCAGTATGTTTGGGGAAGCAGGAGCACTTTGTTGTGAAAATCAACAATTTACATATAGAACCAAAACTCTTTCACAGCTCTTGAGGCTAAAAACAACCGTACTACAAGAAGCTATGCATGTCAGGCAAGAAGACAATATAGCCATTGTCAAGAACTTCCTTCAGGAAAGGAAGCTCAGCCACAAAATAACCATAGAAGGTTCGCCTGAAAAAGAGCCAGTGTTGTTTGAAGAAAAGGATCAAAGTTTCAATTGGAAGCACTCCATTGAATTAGATTTTGCTAGAGTGAACATATACAAAGGTCATCCAGTAGCCAGAAAACAGGCTTCTTGTGATGCTCCGGGAAAGCTTATCAGATTGCCACGCTCGATGGAGGAGCTCAAAAACATTGCAGGTGAAAAGTTTGGATTTGATGCAAGAAATGCTGTTTTGACAAATGAAGAAGGCTCTGAAATTGATTCTATTGATGTGATAAGGGATAATGATAAGCTTTTTTTCATAGTTGCAGATGATAAATCTTTGTAA | 1929 | 43.65 | MKMNSPHWLGTAAEKDDGSEKKKEEKHGSEEEEDDDDSDMPATLSLRELSKVILPPLGVSSCNEDGGNQVKSNNKWIISPMSSRYRWWQSFMVVLVAYSAWVYPLEVAFVDAIPKPGLLIADNIVDLFFAIDIFFTFFVAYIDPRTQLLVRDSKKIAIRYLSTWFLMDLASTIPFETLAYLATGKYDVGLSYALLGLLRFWRLRRVKQFFTRLEKDIRFSYFWVRCARLLSVTLFYVHCAGCLYYLLADRYPNEGQTWIGTALPNFKEISLGVRYVSALYWSVTTMTTVGYGDLHAVNTVEMIFIIFYMLFNLGLTAYLIGNMTNLVVEGTRRTMEFRNSIEMASNFVNRNRLPSRLKEHILAYMCLRFKAESLNQQHLIEQLPKSICTSICQQLFLPTLEKVYLFKGVSKETLVLLVAKMKAEYIPPKEDVILHNETPDEVYIIVSGEIEIIDCDREVERIVGTLHRGSMFGEAGALCCENQQFTYRTKTLSQLLRLKTTVLQEAMHVRQEDNIAIVKNFLQERKLSHKITIEGSPEKEPVLFEEKDQSFNWKHSIELDFARVNIYKGHPVARKQASCDAPGKLIRLPRSMEELKNIAGEKFGFDARNAVLTNEEGSEIDSIDVIRDNDKLFFIVADDKSL | 642 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 5350399 | 5358212 | + | Hsped.07g05040.1 | Hepe07g0504 | 573899 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hepe07g0504 | 642 | PRINTS | EAG/ELK/ERG potassium channel family signature | 275 | 292 | IPR003938 | GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro) | |
| Hepe07g0504 | 642 | PRINTS | EAG/ELK/ERG potassium channel family signature | 122 | 132 | IPR003938 | GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro) | |
| Hepe07g0504 | 642 | PRINTS | EAG/ELK/ERG potassium channel family signature | 301 | 312 | IPR003938 | GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro) | |
| Hepe07g0504 | 642 | PRINTS | EAG/ELK/ERG potassium channel family signature | 319 | 328 | IPR003938 | GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro) | |
| Hepe07g0504 | 642 | FunFam | Potassium channel KAT2 | 393 | 528 | - | - | |
| Hepe07g0504 | 642 | Pfam | Cyclic nucleotide-binding domain | 426 | 507 | IPR000595 | - | |
| Hepe07g0504 | 642 | SMART | cnmp_10 | 405 | 522 | IPR000595 | - | |
| Hepe07g0504 | 642 | Gene3D | Jelly Rolls | 372 | 540 | IPR014710 | - | |
| Hepe07g0504 | 642 | MobiDBLite | consensus disorder prediction | 1 | 41 | - | - | |
| Hepe07g0504 | 642 | SUPERFAMILY | Voltage-gated potassium channels | 80 | 328 | - | - | |
| Hepe07g0504 | 642 | Pfam | KHA, dimerisation domain of potassium ion channel | 563 | 634 | IPR021789 | - | |
| Hepe07g0504 | 642 | FunFam | Potassium channel KAT3 | 87 | 329 | - | - | |
| Hepe07g0504 | 642 | ProSiteProfiles | KHA domain profile. | 563 | 642 | IPR021789 | - | |
| Hepe07g0504 | 642 | SUPERFAMILY | cAMP-binding domain-like | 332 | 521 | IPR018490 | - | |
| Hepe07g0504 | 642 | MobiDBLite | consensus disorder prediction | 13 | 29 | - | - | |
| Hepe07g0504 | 642 | Pfam | Ion transport protein | 85 | 334 | IPR005821 | GO:0005216(InterPro)|GO:0006811(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Hepe07g0504 | 642 | Gene3D | - | 87 | 328 | - | - | |
| Hepe07g0504 | 642 | PANTHER | POTASSIUM CHANNEL AKT1 | 31 | 532 | IPR045319 | GO:0005249(InterPro)|GO:0006813(InterPro) | |
| Hepe07g0504 | 642 | CDD | CAP_ED | 405 | 508 | IPR000595 | - | |
| Hepe07g0504 | 642 | ProSiteProfiles | cAMP/cGMP binding motif profile. | 405 | 524 | IPR000595 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Hepe07g0504 | Hepe-Chr7:5350399 | Hepe07g1794 | Hepe-Chr7:60604530 | 6.59e-162 | dispersed | |
| Hepe07g0504 | Hepe-Chr7:5350399 | Hepe09g0689 | Hepe-Chr9:6524761 | 1.34e-155 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hepe07g0504 | K21867 | - | csv:101205212 | 1063.52 |