Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g0514 ATGGCTTCTACTGTGGATCAGATGAAAAATGCAATGAAGATCAATGACTGGGTAAGCCTGCAGGAGAGTTTTGATAAGATAAATAAGCAGCTTGAGAAAGTCATGCGTGTTACTGAGTCTGAGAAGCTGCCATCTCTATATATTAAAGCACTTGTGATGCTAGAGGACTTCCTAAATCAAGCCATGGCTAATAAGGAAGCTAAGAAGAAAATGAGTACTAGCAATGCTAAGGCCTTGAATTCAATGAAACAGAAGCTGAAGAAGAACAATAAGCAATATGAAGAGTTAATTACCAAGTGTAGGGAGAATCCTGAGATTGAGGAAGAGAAGGTGGATGAGTTGGAGACAGATGAGGAGGATGATGATGAAGATGATGATGATTCTGTAATTATGGAGGATCCTTCTAAAATCGTAATGTCAGCTTCAGAAAATGAAGAGGAGGATGAAGATGCCCAAGGGGATGATTGGAAGAAACAGTTGAATAAAAGAGATAAGCTCTTCGATAAGCAGTTTATGAAGGATCCTAGTGAGATCACATGGGACACTGTTAACAAGAAATTTAAGGAGGTTGTGGCTGCTCGGGGTAGGAAAGGAACTGGAAGATTTGAGCAGGTTGAGCAGCTTACATTCTTAACAAAAGTTGCTAAGACCCCTGCACAGAAGCTTGAGATTTTGTTCAGTGTTATATCTGCTCAATTTGATGTTAATCCAGGTCTCAGTGGGCACATGCCTATCAGTGTGTGGAAGAAGTGTGTGCATAATATGCTTTCTATAATTGACATTCTTGTGCAGAATTCTAACCTTGTGGTGGATGATATGGTTGAACCTGATGAGAATGAAAGCCAGAAGCCAGCAGACTATAAGGGCACAATTCGTGTTTGGGGAAATTTGGTTGCTTTTATTGAGAGGATTGACACCGAGTTTTTCAAGAGTTTGCAGTGTATTGATCCACATACACGGGAGTATGTTCAAAGACTCAGAGACGAGCCAATGTTTATGGTTCTTGCTCAGAATGTCCAAGAATATTTGGAACGAATTGGGGATCACAAAGCAGCTTCGAAAGTTGCCTTGAGGCGTGTCGAATTGATCTATTACAAACCACAAGAGGTTTATGATGCCATGAGGAAGCTTGCAGAGCTGTCAGAAGATGGAGATAGTGGAGATGTAACTGAGGAGGCCAAAGTAGTAGAAGAGAGTAGGGGCCGTGCTGCATTTATTGTCACTCCAGAGCTTGTACCTCGCAAACCCACCTTTCCAGAGAGTTGTAGGGCTTTTATGGACATTCTGGTGACCCTCATATACCAATATGGAGATGAGCGCACTAAAGCACGAGCCATGCTCTGTGATATTTACCAACATGCTCTCTTAGATGAATTTTATATTTCTCGTGACTTGTTGCTGATGAGTCACTTACAGGATAGTATTCAACACCTGGACATTTCAACACAGATCCTTTTCAATAGGGCAATGGCTCAACTTGGTCTATGCGGATTTCGGGTTGGCCTGATTACTGAAGGACATGGCTGCCTTTCAGAATTATATTCTGGTGGAAGGGTGAAGGAATTGCTTGCACAAGGTGTCTCACAGAGCCGATATCATGAAAAGACTCCAGAACAGGAAAGGCTTGAAAGAAGAAGGCAGATGCCATACCACATGCACATAAATCTTGAGCTCCTGGAAGCCGTGCATTTAATAAGTGCTATGCTGCTGGAAGTTCCCAACATGGCAGGCAATGTTCATGATGCAAAGCGCAGGGTTATTAGTAAGAACTTTAGAAGGCTACTTGAGGTGAGTGAGAGACAAACGTTCACCGGTCCCCCCGAGAATGTCAGAGATCATGTAATGGCTGCTACCAGAGCCCTTCGCAAGGGTGATTTCCAGAAGGCTTTTGATGTTATTGCATCTCTAGATGCATGGAAGCTACTTAAGAATCGTGATGGAGTGCTTGAAATGGTTAAAGGAAAGATCAAGGAGGAGGCTCTGAGGACTTACCTTCTCACATACTCTTCGTCTTATGATTCTCTGAGTTCGGACCATCTCACTCAAATGTTCGCCCTCGCAGAGGGTCAAACACACAGCATTGTTAGCAAGATGATGATCAACGAGGAGCTCCATGCGAGTTGGGATCAGCCAAGTGCGTGCGTCATCTTCCACGATGTTACACACACCCGTTTACAGAGCCTAGCATTCCAATTGGCAGATAAGCTGTCAATCCTTGCTGAAACTAATGAGAGGGCAGTGGAGGCAAGAATAGGAGGAGGAGGAATTGATTTACCCATGAGGCGACGAGACAATCAAGAATATGCTTCTGGAGCTGGAGGTGGGGGTAACAGGTGGCCAGATAACTCTTACCATCAAGGAAGGCAAGGTGGTGGTAATTTCCGTGGAGGGTATAGCGGCGGAGGGCGAGGTCAAGGTGGGGGTGGTGGTGGATATTCTAGAGACTACCGGACGGGTCAGTCACGAGGAGGCAATGCAGGATACCAAAGCACCCGTTATCAAGATGCAGCATATGGATCAGGGAGGACCGCTTATCAGTCTGGTTCTGTTCGAGGATCCCAGATGGATGCATCGGCTCGCATGGTCAGTCTCAACAAAGGGGTTCATGCTTAA 2613 44.62 MASTVDQMKNAMKINDWVSLQESFDKINKQLEKVMRVTESEKLPSLYIKALVMLEDFLNQAMANKEAKKKMSTSNAKALNSMKQKLKKNNKQYEELITKCRENPEIEEEKVDELETDEEDDDEDDDDSVIMEDPSKIVMSASENEEEDEDAQGDDWKKQLNKRDKLFDKQFMKDPSEITWDTVNKKFKEVVAARGRKGTGRFEQVEQLTFLTKVAKTPAQKLEILFSVISAQFDVNPGLSGHMPISVWKKCVHNMLSIIDILVQNSNLVVDDMVEPDENESQKPADYKGTIRVWGNLVAFIERIDTEFFKSLQCIDPHTREYVQRLRDEPMFMVLAQNVQEYLERIGDHKAASKVALRRVELIYYKPQEVYDAMRKLAELSEDGDSGDVTEEAKVVEESRGRAAFIVTPELVPRKPTFPESCRAFMDILVTLIYQYGDERTKARAMLCDIYQHALLDEFYISRDLLLMSHLQDSIQHLDISTQILFNRAMAQLGLCGFRVGLITEGHGCLSELYSGGRVKELLAQGVSQSRYHEKTPEQERLERRRQMPYHMHINLELLEAVHLISAMLLEVPNMAGNVHDAKRRVISKNFRRLLEVSERQTFTGPPENVRDHVMAATRALRKGDFQKAFDVIASLDAWKLLKNRDGVLEMVKGKIKEEALRTYLLTYSSSYDSLSSDHLTQMFALAEGQTHSIVSKMMINEELHASWDQPSACVIFHDVTHTRLQSLAFQLADKLSILAETNERAVEARIGGGGIDLPMRRRDNQEYASGAGGGGNRWPDNSYHQGRQGGGNFRGGYSGGGRGQGGGGGGYSRDYRTGQSRGGNAGYQSTRYQDAAYGSGRTAYQSGSVRGSQMDASARMVSLNKGVHA 870
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 5430883 5435983 + Hsped.07g05140.1 Hepe07g0514 573909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g0514 870 MobiDBLite consensus disorder prediction 97 155 - -
Hepe07g0514 870 Pfam Eukaryotic translation initiation factor 3 subunit 8 N-terminus 1 582 IPR008905 GO:0003743(InterPro)|GO:0005852(InterPro)|GO:0006413(InterPro)|GO:0031369(InterPro)
Hepe07g0514 870 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 651 739 IPR000717 -
Hepe07g0514 870 MobiDBLite consensus disorder prediction 766 831 - -
Hepe07g0514 870 MobiDBLite consensus disorder prediction 108 130 - -
Hepe07g0514 870 Hamap Eukaryotic translation initiation factor 3 subunit C [EIF3C]. 1 812 IPR027516 GO:0003723(InterPro)|GO:0003743(InterPro)|GO:0005852(InterPro)|GO:0006413(InterPro)|GO:0031369(InterPro)
Hepe07g0514 870 SUPERFAMILY Winged helix DNA-binding domain 648 721 IPR036390 -
Hepe07g0514 870 Pfam PCI domain 648 719 IPR000717 -
Hepe07g0514 870 Coils Coil 76 103 - -
Hepe07g0514 870 ProSiteProfiles PCI domain profile. 550 722 IPR000717 -
Hepe07g0514 870 PANTHER EUKARYOTIC TRANSLATION INITATION FACTOR 3, SUBUNIT 8 EIF3S8 -RELATED 1 820 IPR027516 GO:0003723(InterPro)|GO:0003743(InterPro)|GO:0003743(PANTHER)|GO:0005852(InterPro)|GO:0005852(PANTHER)|GO:0006413(PANTHER)|GO:0006413(InterPro)|GO:0031369(InterPro)|GO:0031369(PANTHER)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g0514 K03252 - csv:101203990 1424.07