Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g0517 ATGGGCAAAGGACCATTTTCTTTTCGCCGGAGCAGTAGTCGTCGCCGCCCTAAGAAGGCGCCTCAGTCGTCACCGTGGTCGTCGCCTCAGCCACCTCCGCTGATTGATGCCAGTTCTCCTCCTATTAACAATAATGGCAGCGGTGTGGTCGGTGGCGGTGGTGGGGCTGTGGGAAAGGTGAAGAAGAAGGCTGGAGGAGCGAGGCTGTGGATGCGTCTCGACAGGTGGGGGCAGTCGGAGCTTTTAGAGTGGGACAAGAGCGCTATAATCCGGCGTGCTTCAATTCCGGCTAGAGATTTGAGGATTCTTGGTCCTGTTTTCTCCCAATCCTCCAACATACTCGCCAGGGAAAAGGCCATGGTTGTTAATTTAGAGTTCATAAAAGCTATAGTTACTGCTGAAGAAGTCCTACTACTTGACCCTCTTCGCCAAGAGGTTATTCCATTTGTGGATCAACTAAGGAAACTACTTGCTAAGAAGAGTTCATCTCAGGGCTATGGAGATGGAACTGTGGATGAACGTGAAAATGATGGGAATGTTTCAAGAGGAGGAATGCGGTTGCCAGTTTCGGAAGCTGTTGAAGGCGAGCAATATGAGCTCCCGTTTGAGTTCCAGGTTCTGGAAAACGCGTTGGAGGTTGTGTGCATGTACTTAGATTCCAGTGTGGTAGACCTTGAGAGAGATGCTTATCCAGTTCTGGATGAACTGGCTAGGAATGTCAGCACCAAGAATCTAGAACGTGTGAGGAGCTTGAAAAGTAATCTTACACGTATTCTTGCACGCGTTCAGAAGGTGCGGGACGAGATAGAACATCTATTAGATGATAATGAAGATATGGCACAACTATATTTGACAAGGAAATGGATGCAGATTCAACAATCTGATGCTTTGCTGGGAGGCGTGGGTTCCAACAGCGCCGCTGCCATTGTTCCCCATTTTCGTCGACTTAGTTCCACCAGGAGTGGAAGTGTCTTGACCAGCAATCTTTCGGATGATAATGACGTAGAGGATCTGGAGATGTTGCTCGAGGCATATTTTATGCAGATAGATGGGACTCGTAACAGGATATTATCGGTTAGGGAATACATTGATGACACAGAGGATTACGTCAATATTCAACTTGACAACCAAAGAAATGAACTGATTCAGTTTCAATTGACACTGACCATTGCTTCATTTGCCATAGCTATTGAAACCTTACTCGCCGGGTTGTTTGAAGGAAGGGATATTCGGGTACTTCGTCGGCGGTTCTTCAGCAGGTTGTTTGTTGATTTTCGTGCTTATTTTCGGGTATGCAAAATGGAAGAAGCTTCTTGGTTCGTGATTTCACCTCGTCCAAACAATCGAGGGCACTGTCTTCCTTCTGCTTTCAGAGGTAGGGACTTCATCGATCATCGCTCATTGTCCGCCAATAACGCTTCGCTTGCACGCCAGCGCCACGCCTGTCTCAGACTTAGGGAAGAGAAGAGAAGAGAAGAGAGAGAGAAGAGCTCAGCATCTTCTTCATCTTCAGAGATTCGGGTGGAAATTACAAACCCTAGAGAGAAGGAAAAGGGATTTCTTGTGTTTCTTACTATGGCAAATTCTAGAGGGTCATCTAACGTCAGAAATTTTATGAGTTCTGGAAAACATGCACTACTCCCTCCTAAAAGTCCCTTTCCTTATGTTTCTCCATCATATAATGAATTTGTTCCTAATACTGTAATTGGAGCTAAAGCTGTTCAGAGACCAAGAGATGGTAACAGCTACCATCAAAGAACTTCTTCCGAAAGCATTCTAATAGAGGAGCAGCCTTCTTGGCTTGATGATCTCCTCAATGAGCCAGAGACCCCTGTTCGCAGAGTTGGTCATCGACGTTCCTCAAGTGACTCTTTTGCATATACAGATGCTGCCAGTGCTAATTTTGATAGTATGATGCAAGAAGAGTTCAAATATACAAATGCGATTCCTGGACACTCTTGGTTATCTCAAGAATTTGATCATCAGAGAGATGCAAGGCATGCTTCGTTCTATACCGAAGCGAATGTAACAAAACAGAAGAATAGGGTGTGGGAATCATCTTTATCTGCCATGAATTCCATTGCTCTTCATTCTCCCAGGGAGAACATTGTTATTCATACCTCAGGACCATTAAGCACTCCGCAGGAAGCAGATGGTTTGCCTTCTACAGCAAGTGAAAAACAAGATTCAATTGAGTCTGGTTCACATGATCCAAAAGTCTCTTCTGAAAGGAGAGACGTTTCTCATGGAAAATCATCTGTGTCTGATACAGAAAATAAACGTGCCAAACAGCAATTTGCTCAGCGTTCAAGGGTTCGGAAACTTCAATATATAGCTGAGCTTGAAAGGAAAGTACAAGCTTTGCAGGCAGAGGGCTCTGAAGTCTCAGCTGAGCTTGAATTTCTCAACCAGCAAAATCTTATTCTTAGCATGGAAAACAAAGCCCTCAAGCAGCGGTTAGAGAATTTAACTCAAGAGCAGCTAATTAAATACTTGGAGCAGGAAGTACTGGAGAGGGAGATCGGAAGGTTAAGAACTGTGCATCAGCAGCAACATCAGCCACAACAACCGCAACAACATCGACATTCTTCTAGCCATCATCGGCGTACTTCAAGCAAAGACCTTGACAATCAATTTGCCAACCTTTCTTTGAAGCAAAAGGATTCTGGTTCAAGTCGTGACCCGGTAACAGGTCCAGTGCGCAGTTAG 2709 45.11 MGKGPFSFRRSSSRRRPKKAPQSSPWSSPQPPPLIDASSPPINNNGSGVVGGGGGAVGKVKKKAGGARLWMRLDRWGQSELLEWDKSAIIRRASIPARDLRILGPVFSQSSNILAREKAMVVNLEFIKAIVTAEEVLLLDPLRQEVIPFVDQLRKLLAKKSSSQGYGDGTVDERENDGNVSRGGMRLPVSEAVEGEQYELPFEFQVLENALEVVCMYLDSSVVDLERDAYPVLDELARNVSTKNLERVRSLKSNLTRILARVQKVRDEIEHLLDDNEDMAQLYLTRKWMQIQQSDALLGGVGSNSAAAIVPHFRRLSSTRSGSVLTSNLSDDNDVEDLEMLLEAYFMQIDGTRNRILSVREYIDDTEDYVNIQLDNQRNELIQFQLTLTIASFAIAIETLLAGLFEGRDIRVLRRRFFSRLFVDFRAYFRVCKMEEASWFVISPRPNNRGHCLPSAFRGRDFIDHRSLSANNASLARQRHACLRLREEKRREEREKSSASSSSSEIRVEITNPREKEKGFLVFLTMANSRGSSNVRNFMSSGKHALLPPKSPFPYVSPSYNEFVPNTVIGAKAVQRPRDGNSYHQRTSSESILIEEQPSWLDDLLNEPETPVRRVGHRRSSSDSFAYTDAASANFDSMMQEEFKYTNAIPGHSWLSQEFDHQRDARHASFYTEANVTKQKNRVWESSLSAMNSIALHSPRENIVIHTSGPLSTPQEADGLPSTASEKQDSIESGSHDPKVSSERRDVSHGKSSVSDTENKRAKQQFAQRSRVRKLQYIAELERKVQALQAEGSEVSAELEFLNQQNLILSMENKALKQRLENLTQEQLIKYLEQEVLEREIGRLRTVHQQQHQPQQPQQHRHSSSHHRRTSSKDLDNQFANLSLKQKDSGSSRDPVTGPVRS 902
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 5459026 5475602 + Hsped.07g05170.1 Hepe07g0517 573912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g0517 902 SUPERFAMILY Leucine zipper domain 767 809 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe07g0517 902 MobiDBLite consensus disorder prediction 487 509 - -
Hepe07g0517 902 FunFam Magnesium transporter MRS2-1 58 141 - -
Hepe07g0517 902 Coils Coil 771 826 - -
Hepe07g0517 902 Gene3D - 58 141 - -
Hepe07g0517 902 SMART brlzneu 756 815 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe07g0517 902 MobiDBLite consensus disorder prediction 705 769 - -
Hepe07g0517 902 Gene3D Magnesium transport protein CorA, transmembrane region 149 381 - -
Hepe07g0517 902 Pfam Magnesium transporter MRS2-like 83 289 - -
Hepe07g0517 902 Pfam Magnesium transporter MRS2-like 325 378 - -
Hepe07g0517 902 Coils Coil 248 282 - -
Hepe07g0517 902 CDD Mrs2_Mfm1p-like 70 405 IPR039204 -
Hepe07g0517 902 MobiDBLite consensus disorder prediction 846 902 - -
Hepe07g0517 902 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN-RELATED 534 885 IPR044797 -
Hepe07g0517 902 Gene3D - 758 812 - -
Hepe07g0517 902 Coils Coil 475 495 - -
Hepe07g0517 902 MobiDBLite consensus disorder prediction 730 765 - -
Hepe07g0517 902 MobiDBLite consensus disorder prediction 1 57 - -
Hepe07g0517 902 CDD bZIP_plant_RF2 760 806 IPR044759 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe07g0517 902 MobiDBLite consensus disorder prediction 705 729 - -
Hepe07g0517 902 MobiDBLite consensus disorder prediction 24 38 - -
Hepe07g0517 902 MobiDBLite consensus disorder prediction 162 185 - -
Hepe07g0517 902 MobiDBLite consensus disorder prediction 875 896 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g1111 Hepe-Chr1:75998320 Hepe07g0517 Hepe-Chr7:5459026 1.27e-12 dispersed
Hepe03g0248 Hepe-Chr3:3170359 Hepe07g0517 Hepe-Chr7:5459026 2.66e-86 dispersed
Hepe06g1965 Hepe-Chr6:70884018 Hepe07g0517 Hepe-Chr7:5459026 8.96e-82 dispersed
Hepe07g0517 Hepe-Chr7:5459026 Hepe10g1490 Hepe-Chr10:51727945 2.79e-111 dispersed
Hepe07g0516 Hepe-Chr7:5445569 Hepe07g0517 Hepe-Chr7:5459026 2.35e-82 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g0517 K16075 - csv:101203254 648.662