Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g0517 ATGGGCAAAGGACCATTTTCTTTTCGCCGGAGCAGTAGTCGTCGCCGCCCTAAGAAGGCGCCTCAGTCGTCACCGTGGTCGTCGCCTCAGCCACCTCCGCTGATTGATGCCAGTTCTCCTCCTATTAACAATAATGGCAGCGGTGTGGTCGGTGGCGGTGGTGGGGCTGTGGGAAAGGTGAAGAAGAAGGCTGGAGGAGCGAGGCTGTGGATGCGTCTCGACAGGTGGGGGCAGTCGGAGCTTTTAGAGTGGGACAAGAGCGCTATAATCCGGCGTGCTTCAATTCCGGCTAGAGATTTGAGGATTCTTGGTCCTGTTTTCTCCCAATCCTCCAACATACTCGCCAGGGAAAAGGCCATGGTTGTTAATTTAGAGTTCATAAAAGCTATAGTTACTGCTGAAGAAGTCCTACTACTTGACCCTCTTCGCCAAGAGGTTATTCCATTTGTGGATCAACTAAGGAAACTACTTGCTAAGAAGAGTTCATCTCAGGGCTATGGAGATGGAACTGTGGATGAACGTGAAAATGATGGGAATGTTTCAAGAGGAGGAATGCGGTTGCCAGTTTCGGAAGCTGTTGAAGGCGAGCAATATGAGCTCCCGTTTGAGTTCCAGGTTCTGGAAAACGCGTTGGAGGTTGTGTGCATGTACTTAGATTCCAGTGTGGTAGACCTTGAGAGAGATGCTTATCCAGTTCTGGATGAACTGGCTAGGAATGTCAGCACCAAGAATCTAGAACGTGTGAGGAGCTTGAAAAGTAATCTTACACGTATTCTTGCACGCGTTCAGAAGGTGCGGGACGAGATAGAACATCTATTAGATGATAATGAAGATATGGCACAACTATATTTGACAAGGAAATGGATGCAGATTCAACAATCTGATGCTTTGCTGGGAGGCGTGGGTTCCAACAGCGCCGCTGCCATTGTTCCCCATTTTCGTCGACTTAGTTCCACCAGGAGTGGAAGTGTCTTGACCAGCAATCTTTCGGATGATAATGACGTAGAGGATCTGGAGATGTTGCTCGAGGCATATTTTATGCAGATAGATGGGACTCGTAACAGGATATTATCGGTTAGGGAATACATTGATGACACAGAGGATTACGTCAATATTCAACTTGACAACCAAAGAAATGAACTGATTCAGTTTCAATTGACACTGACCATTGCTTCATTTGCCATAGCTATTGAAACCTTACTCGCCGGGTTGTTTGAAGGAAGGGATATTCGGGTACTTCGTCGGCGGTTCTTCAGCAGGTTGTTTGTTGATTTTCGTGCTTATTTTCGGGTATGCAAAATGGAAGAAGCTTCTTGGTTCGTGATTTCACCTCGTCCAAACAATCGAGGGCACTGTCTTCCTTCTGCTTTCAGAGGTAGGGACTTCATCGATCATCGCTCATTGTCCGCCAATAACGCTTCGCTTGCACGCCAGCGCCACGCCTGTCTCAGACTTAGGGAAGAGAAGAGAAGAGAAGAGAGAGAGAAGAGCTCAGCATCTTCTTCATCTTCAGAGATTCGGGTGGAAATTACAAACCCTAGAGAGAAGGAAAAGGGATTTCTTGTGTTTCTTACTATGGCAAATTCTAGAGGGTCATCTAACGTCAGAAATTTTATGAGTTCTGGAAAACATGCACTACTCCCTCCTAAAAGTCCCTTTCCTTATGTTTCTCCATCATATAATGAATTTGTTCCTAATACTGTAATTGGAGCTAAAGCTGTTCAGAGACCAAGAGATGGTAACAGCTACCATCAAAGAACTTCTTCCGAAAGCATTCTAATAGAGGAGCAGCCTTCTTGGCTTGATGATCTCCTCAATGAGCCAGAGACCCCTGTTCGCAGAGTTGGTCATCGACGTTCCTCAAGTGACTCTTTTGCATATACAGATGCTGCCAGTGCTAATTTTGATAGTATGATGCAAGAAGAGTTCAAATATACAAATGCGATTCCTGGACACTCTTGGTTATCTCAAGAATTTGATCATCAGAGAGATGCAAGGCATGCTTCGTTCTATACCGAAGCGAATGTAACAAAACAGAAGAATAGGGTGTGGGAATCATCTTTATCTGCCATGAATTCCATTGCTCTTCATTCTCCCAGGGAGAACATTGTTATTCATACCTCAGGACCATTAAGCACTCCGCAGGAAGCAGATGGTTTGCCTTCTACAGCAAGTGAAAAACAAGATTCAATTGAGTCTGGTTCACATGATCCAAAAGTCTCTTCTGAAAGGAGAGACGTTTCTCATGGAAAATCATCTGTGTCTGATACAGAAAATAAACGTGCCAAACAGCAATTTGCTCAGCGTTCAAGGGTTCGGAAACTTCAATATATAGCTGAGCTTGAAAGGAAAGTACAAGCTTTGCAGGCAGAGGGCTCTGAAGTCTCAGCTGAGCTTGAATTTCTCAACCAGCAAAATCTTATTCTTAGCATGGAAAACAAAGCCCTCAAGCAGCGGTTAGAGAATTTAACTCAAGAGCAGCTAATTAAATACTTGGAGCAGGAAGTACTGGAGAGGGAGATCGGAAGGTTAAGAACTGTGCATCAGCAGCAACATCAGCCACAACAACCGCAACAACATCGACATTCTTCTAGCCATCATCGGCGTACTTCAAGCAAAGACCTTGACAATCAATTTGCCAACCTTTCTTTGAAGCAAAAGGATTCTGGTTCAAGTCGTGACCCGGTAACAGGTCCAGTGCGCAGTTAG 2709 45.11 MGKGPFSFRRSSSRRRPKKAPQSSPWSSPQPPPLIDASSPPINNNGSGVVGGGGGAVGKVKKKAGGARLWMRLDRWGQSELLEWDKSAIIRRASIPARDLRILGPVFSQSSNILAREKAMVVNLEFIKAIVTAEEVLLLDPLRQEVIPFVDQLRKLLAKKSSSQGYGDGTVDERENDGNVSRGGMRLPVSEAVEGEQYELPFEFQVLENALEVVCMYLDSSVVDLERDAYPVLDELARNVSTKNLERVRSLKSNLTRILARVQKVRDEIEHLLDDNEDMAQLYLTRKWMQIQQSDALLGGVGSNSAAAIVPHFRRLSSTRSGSVLTSNLSDDNDVEDLEMLLEAYFMQIDGTRNRILSVREYIDDTEDYVNIQLDNQRNELIQFQLTLTIASFAIAIETLLAGLFEGRDIRVLRRRFFSRLFVDFRAYFRVCKMEEASWFVISPRPNNRGHCLPSAFRGRDFIDHRSLSANNASLARQRHACLRLREEKRREEREKSSASSSSSEIRVEITNPREKEKGFLVFLTMANSRGSSNVRNFMSSGKHALLPPKSPFPYVSPSYNEFVPNTVIGAKAVQRPRDGNSYHQRTSSESILIEEQPSWLDDLLNEPETPVRRVGHRRSSSDSFAYTDAASANFDSMMQEEFKYTNAIPGHSWLSQEFDHQRDARHASFYTEANVTKQKNRVWESSLSAMNSIALHSPRENIVIHTSGPLSTPQEADGLPSTASEKQDSIESGSHDPKVSSERRDVSHGKSSVSDTENKRAKQQFAQRSRVRKLQYIAELERKVQALQAEGSEVSAELEFLNQQNLILSMENKALKQRLENLTQEQLIKYLEQEVLEREIGRLRTVHQQQHQPQQPQQHRHSSSHHRRTSSKDLDNQFANLSLKQKDSGSSRDPVTGPVRS 902
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 5459026 5475602 + Hsped.07g05170.1 Hepe07g0517 573912

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g0517 902 SUPERFAMILY Leucine zipper domain 767 809 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe07g0517 902 MobiDBLite consensus disorder prediction 487 509 - -
Hepe07g0517 902 FunFam Magnesium transporter MRS2-1 58 141 - -
Hepe07g0517 902 Coils Coil 771 826 - -
Hepe07g0517 902 Gene3D - 58 141 - -
Hepe07g0517 902 SMART brlzneu 756 815 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe07g0517 902 MobiDBLite consensus disorder prediction 705 769 - -
Hepe07g0517 902 Gene3D Magnesium transport protein CorA, transmembrane region 149 381 - -
Hepe07g0517 902 Pfam Magnesium transporter MRS2-like 83 289 - -
Hepe07g0517 902 Pfam Magnesium transporter MRS2-like 325 378 - -
Hepe07g0517 902 Coils Coil 248 282 - -
Hepe07g0517 902 CDD Mrs2_Mfm1p-like 70 405 IPR039204 -
Hepe07g0517 902 MobiDBLite consensus disorder prediction 846 902 - -
Hepe07g0517 902 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN-RELATED 534 885 IPR044797 -
Hepe07g0517 902 Gene3D - 758 812 - -
Hepe07g0517 902 Coils Coil 475 495 - -
Hepe07g0517 902 MobiDBLite consensus disorder prediction 730 765 - -
Hepe07g0517 902 MobiDBLite consensus disorder prediction 1 57 - -
Hepe07g0517 902 CDD bZIP_plant_RF2 760 806 IPR044759 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe07g0517 902 MobiDBLite consensus disorder prediction 705 729 - -
Hepe07g0517 902 MobiDBLite consensus disorder prediction 24 38 - -
Hepe07g0517 902 MobiDBLite consensus disorder prediction 162 185 - -
Hepe07g0517 902 MobiDBLite consensus disorder prediction 875 896 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g0517 K16075 - - csv:101203254 648.662
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g1111 Hepe-Chr1:75998320 Hepe07g0517 Hepe-Chr7:5459026 1.27e-12 dispersed
Hepe03g0248 Hepe-Chr3:3170359 Hepe07g0517 Hepe-Chr7:5459026 2.66e-86 dispersed
Hepe06g1965 Hepe-Chr6:70884018 Hepe07g0517 Hepe-Chr7:5459026 8.96e-82 dispersed
Hepe07g0517 Hepe-Chr7:5459026 Hepe10g1490 Hepe-Chr10:51727945 2.79e-111 dispersed
Hepe07g0516 Hepe-Chr7:5445569 Hepe07g0517 Hepe-Chr7:5459026 2.35e-82 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi12g1127 . . . . . . . . . . . . . . Sed06g1767 Cpe01g00486 Cpe14g00328 Bhi01g01582 Tan01g0794 Cmetu06g0931 . Hepe07g0517 Mch10g0558 . Cla05g01019 Cam05g1113 Cec05g1123 Cco05g1113 . . . Cone3ag0919 Cone10ag0892 . . . Csa03g01927 Chy10g00753 Cme06g01213 Blo06g00800 . . Bda07g01669 . . . . . Cmo04g00576 Cmo16g00423 . . . . . . . . . . . . . . . . . . . . Lsi05g00156 . Chy06g01143 Cme10g00697
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Hepe02g1289 . 1 447 MRS2 Gene Family AT1G16010 85.0 5.4e-207 717.2
Hepe10g0575 . 6 380 MRS2 Gene Family AT1G16010 52.4 4.4e-108 388.7
Hepe06g1965 . 29 330 MRS2 Gene Family AT1G16010 50.9 8.9e-77 284.6
Hepe03g0248 . 1 367 MRS2 Gene Family AT5G64560 81.8 5.9e-162 567.4
Hepe06g1965 . 1 331 MRS2 Gene Family AT5G64560 67.5 2.1e-111 399.4
Hepe02g0661 . 21 493 MRS2 Gene Family AT3G19640 62.5 2.0e-146 516.2
Hepe07g0517 . 58 405 MRS2 Gene Family AT3G58970 69.2 2.6e-121 432.6
Hepe10g0575 . 3 380 MRS2 Gene Family AT2G03620 68.1 4.3e-137 485.0
Hepe02g1289 . 13 447 MRS2 Gene Family AT2G03620 53.3 4.3e-113 405.2
Hepe03g0248 . 1 329 MRS2 Gene Family AT5G09690 75.6 1.2e-128 456.4
Hepe06g1965 . 1 330 MRS2 Gene Family AT5G09690 64.3 2.3e-106 382.5
Hepe02g1289 . 40 383 MRS2 Gene Family AT5G09690 50.6 1.5e-78 290.0
Hepe03g0248 . 12 289 MRS2 Gene Family AT5G09720 67.0 5.0e-92 334.7
Hepe06g1965 . 35 293 MRS2 Gene Family AT5G09720 58.6 5.2e-73 271.6
Hepe02g1289 . 1 447 MRS2 Gene Family AT1G80900 83.2 9.9e-201 696.4
Hepe10g0575 . 6 380 MRS2 Gene Family AT1G80900 54.0 1.4e-106 383.6
Hepe06g1965 . 29 330 MRS2 Gene Family AT1G80900 50.5 1.0e-72 271.2
Hepe10g0930 . 104 443 MRS2 Gene Family AT5G22830 83.5 8.2e-158 553.9
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003636 0 2 1 1 1 2 2 2 2 1 2 1 2 1 1 2 2 2 2 1 1 1 2 2 1 1 1 5 2 1 47