Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g0518 ATGATTATGGAGAATCAGTTGTTAATCTCCGTTTTCCAAAGAAACCCATGTTTGTTTCTCGATCATAGACCAAATGTTATTGTCTTCCTTTTGATCTTCTTCTCTCTCGCCTGCTCCTTCTCACCCTCCTATGGATTTGACTCTTTGGACCCTCATGCCAACGTTACTATCACATGGGATTTCTTGGTAGAGAATGGGGATACTTTTGATGTGAGGGTTTCATTATACAATTTCCAACTGTTTCGCCATGTGGAGCTGCCTGGTTGGAGACTTAGCTGGTCATGGAAAGGTGATGAGGTTATATGGAGTATGTGGGGAGCAGAGACTACTGAGCAAGGAAATTGCTCCAAATACATAGGCAAAGAGCTTCCTCATTGTTGTGAGAAGGAGCCTGTGATTGTTGATCTTATGCCTGGAGCTCCTTATAAAATGCAGGTGGCCAATTGTTGTAAAGGAGGTGTACTATCTACCATGAGACAAGACCCTGCCAACTATGGAGCTGCCTTCCAAATGAATGTTGGGAAGTCTGCTGGAAAGGGTGTAGATAGCAAAATGCCTGCAAATTTCACCCTGGGGCTTCCTGGATATACTTGTAGTGACCCATTTCAAGTCTCTCCAACCAGGTTCAGTAAGGATGGCGGTCGCCGGTGGACACAAGTTCTAGAAACATGGAACGTGACCTGTATTTACTCACAATTTCAATCATCACCGGCACCAGGATGCTGTGTTTCGTTGTCATCCTTCTACAACAGCACTATTATTCCTTGCCCTCAGTGCAGCTGTGGTTGCCCAGGGCTAGAGAGAACAAAATGTGTCAAGTCAGGTGAAACTCCTTCAGTGTTGCAACTTCCACATGAAAATTACTCTGCTAAAGTAGAGCCATTGGTGAGGTGTTCACAGCACATGTGCCCAATAAGGGTGCATTGGCATGTGAAACAGAGTTATACACAGTATTGGAGGGTAAAGATAACAATCACAAATCTAAATTTTGCTAAGAACTACTCTCAATGGAACTTAGTAGTCCTGCATCCCAACTTGAGGAATATTACTCAAGTTTTCAGCTTCAACTACAGCCCCCTCAATCAGTATGGTAACATCAATGACACAGGGATGTTTTGGGGGATACAATTCTACAATGACTTGTTACTCACATCAGGAGAGAGAGGGAATGTTCAGACAGAGATTCTTCTCCGAAAAGATTCAGAAATTTTCACTTTCAGAGAAGGATGGGCATTCCCAAGAAGAATTATGTTCAATGGAGATGAATGTGTAATGCCACCTCCAGACCAATATCCAAGGCTCCCAAATAAAGCTCACAGGGCCATGGCAGCCTCATACATAGTTTTCTTCTGCTTGTTTCTCTCTGTATCATTATAA 1377 43.21 MIMENQLLISVFQRNPCLFLDHRPNVIVFLLIFFSLACSFSPSYGFDSLDPHANVTITWDFLVENGDTFDVRVSLYNFQLFRHVELPGWRLSWSWKGDEVIWSMWGAETTEQGNCSKYIGKELPHCCEKEPVIVDLMPGAPYKMQVANCCKGGVLSTMRQDPANYGAAFQMNVGKSAGKGVDSKMPANFTLGLPGYTCSDPFQVSPTRFSKDGGRRWTQVLETWNVTCIYSQFQSSPAPGCCVSLSSFYNSTIIPCPQCSCGCPGLERTKCVKSGETPSVLQLPHENYSAKVEPLVRCSQHMCPIRVHWHVKQSYTQYWRVKITITNLNFAKNYSQWNLVVLHPNLRNITQVFSFNYSPLNQYGNINDTGMFWGIQFYNDLLLTSGERGNVQTEILLRKDSEIFTFREGWAFPRRIMFNGDECVMPPPDQYPRLPNKAHRAMAASYIVFFCLFLSVSL 458
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 5477028 5480841 - Hsped.07g05180.1 Hepe07g0518 573913
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g0518 458 PIRSF COBRA 19 458 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)
Hepe07g0518 458 PANTHER PROTEIN COBRA 30 453 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)|GO:0046658(PANTHER)|GO:0052324(PANTHER)
Hepe07g0518 458 Pfam COBRA-like protein 71 231 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe07g0518 Hepe-Chr7:5477028 Hepe09g0286 Hepe-Chr9:2451841 5.61e-164 dispersed
Hepe07g0518 Hepe-Chr7:5477028 Hepe09g0285 Hepe-Chr9:2448414 1.88e-172 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g0518 - - - 0.0