Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g0528 ATGTTGTTTTTCCTTGTTTTTACTTTCTTCTCTCTTCTAAGCTCCTCTTCTTCCCACAGTTTGGTCAGTGATTTCCATGTTTTGCTTGCTCTAAAACAAGGGTTTGAATTCTCTGACTCTGCTGCACTAAGCACTTGGACTGCCTCAAACTTCAGCTCGGTTTGTTCGTGGGTCGGGATTCGGTGCTCTGACGGTCGAGTCGTGTCGGTTGACTTGACAGATTTGGGCCTTGGTGGTTCTGTTTCGCGGTTGATTTCAAGTCTTGACCAGCTTTCTGAGTTGTCTGTTGCAGGAAATAACTTCACTGGTGATATTGAAGTAGTGAATTTGAGTTACCTTCGATTCCTTAATATCTCAAACAACCAGTTCAATGGAGCTATGGACTGGAACTTTGCAAGTCTGCCGAACTTGGAGGTATTCGATGCCTATAACAACAACTTCACTACTCTGCTTCCCACTGAGATTTTGAATTTACAGAACCTCAAATACTTGGACCTTGGAGGAAACTTTTTCCATGGAAAAATCCCTGAAAGCTATGGCAGTTGGGAAGGGTTGCAATATCTTTCTCTTGCAGGGAATGATTTGAATGGGAAAATCCCAGGTGAGTTGGGAAATCTCACAAATTTGAGAGAAATTTACTTGAGCCATTACAATGTTTTCGAAGGTGGGATTCCGCCCGAGCTCGGGAAGTTGGTCAATTTGGTTATCATGGAGATTTCAGACTGCAGTTTGGACGGTCAAATTCCTCATGAACTGGGGAATTTGAAGGCCTTGAACACTCTATATTTGCATACAAACCTACTCTCAGGTTCGGTCCCGAAGCAGTTAGGAAATTTGACAAACTTGGTCTTTCTTGATCTCTCCAACAATGCACTCACAGGAGAAATCCCATCTGAGTTTGTTGATCTCACACAGCTCAAGCTTTTCAACCTCTTCATGAACAAACTCCACGGCTCTATTCCGGATTACATAGCAGATTTGCCAAATTTGGAGTCCTTGGCGCTGTGGATGAACAACTTCACCGGCACAATCCCGAAGAATCTCGGCCAAAATGGGAGGCTTCAGCTCCTTGATTTGTCGACGAACAAGCTTACAGGTACAATTCCTCAGGATTTGTGTTCAGAAAACCAGCTGAGAATACTGATTCTGATGAACAACTTCCTGTTTGGGCCAATCCCTGATGGGTTGGGGACATGTACCAGTCTTACGAAAGTGAGGTTGGGGCAGAACTATCTGAATGGAAGCATTCCCAATGGCTTCATTTACTTGCCTCAGCTAAATCTAGGAGAGTTTCAGGACAATTACCTTTCAGGTACACTTTCAGAGAATTGGGAGGGTTCATCAAACCCCATCAAATTAGGGCAACTTAATCTCTCTAACAATTTTCTCTCTGGAACTTTACCATTTTCACTCTCTAATTTCTCTTCTCTGCAAATCCTTCTCCTCAATGGCAACCAGTTTTCTGGTACAATCCCTCCTTCCATTGGAGAACTCAATCAACTTCTAAAGCTTGATCTTAGCAGAAACTCACTTTCAGGTGAAATTCCACTTGAAATTGGGAATTGTATCCATCTAACTTACCTTGATTTGAGCAAGAACAACCTCTCTGGCCCAATTCCACCTGAAATTTCCAATGCTCATATTCTCAATTACCTCAACTTGTCCAGAAATCACCTGAATGAATCCTTACCGAAATCAATAGGAGCCATGAAGAGCCTCACGATTGCTGATTTCTCCTTCAACGATTTCTCCGGAAAGCTACCGGAATCAGGACAACTTGCCTTCTTCAATGCTTCGTCCTTCGCTGGAAATCCTCAACTCTGCGGCTCCTTCCTCAACAATCCCTGCAACTTCGAAACAACAACAACTAAACCAGGAAAAACTCCGGCGTATTTCAAGCTAATCTTCGCCCTAGGTCTACTGGTTTGCTCTCTAGTGTTCGCCATAGCCGCAGTAGTCAAAGCAAAATCATTCAAAAGAAACGGATCAAGTTCATGGAAAATGACCTCATTCCAAAAGCTCGAATTCACCGTCTACGACGTCCTGGAGTGCGTGAAAGACGGCAACGTGATCGGAAGAGGCGGCGCCGGCATCGTCTACCACGGGAAAATGCCGAACGGAGTAGAAATCGCAGTGAAGAAACTCCTAGGGTTCGGACCTAACAGTCACGACCATGGATTCCGAGCAGAAATCCAAACCCTAGGCAACATTCGACATCGAAACATCGTCAGATTACTCGCATTCTGCTCCAATAAAGAAACGAATCTCCTCGTATACGAATACATGAGAAACGGAAGCTTAGGCGAAGCACTCCACGGCAAAAAAGCTTCGTTGATCGGATGGAATTTGAGATACAAAATCGCAATTGAAGCCGCCAAAGGTCTCTGCTACCTCCACCACGATTGCTCTCCGTTAATCGTCCACCGAGACGTGAAATCGAACAATATCCTGTTGAATTCAAACTTCGAAGCTCACGTCGCCGATTTCGGACTGGCGAAGTTCATGTTCGACGGAGGCGCGTCGGAATGCATGTCGGTGATCGCCGGATCTTACGGCTACATCGCTCCTGAATATGCATACACATTAAGAGTGGACGAGAAGAGTGATGTGTATAGTTTTGGAGTTGTGTTACTAGAGCTTTTGACGGGGCGTCGGCCAGTTGGAGATTTCGGAGATGGAGTGGTTGATATAGCACAATGGTGCAGAAGAACTATACTAAACGGCGAGAAAGAAAACGACATTATTTGCATAGTTGACAAACGGGTAGGGATGGTGCCCAAAGAGGAAGCAAAGCACTTATTCTTCATAGCAATGCTATGTGTGCAAGAGAAGAGTGTGGAGAGACCAACAATGAGAGAAGTGGTTCAAATGTTGGCTGAGTTTTCTCACCAATCTCCCAACAATTTCCAATCTTCATCTTCTTCTTCTCCTTGTCAAAATTTGAAGAAGGGAGAAAAGGAGAAAGAAGATCAATTGAAGTCCAAACTAGACCTTTTGGTTTAA 3003 44.26 MLFFLVFTFFSLLSSSSSHSLVSDFHVLLALKQGFEFSDSAALSTWTASNFSSVCSWVGIRCSDGRVVSVDLTDLGLGGSVSRLISSLDQLSELSVAGNNFTGDIEVVNLSYLRFLNISNNQFNGAMDWNFASLPNLEVFDAYNNNFTTLLPTEILNLQNLKYLDLGGNFFHGKIPESYGSWEGLQYLSLAGNDLNGKIPGELGNLTNLREIYLSHYNVFEGGIPPELGKLVNLVIMEISDCSLDGQIPHELGNLKALNTLYLHTNLLSGSVPKQLGNLTNLVFLDLSNNALTGEIPSEFVDLTQLKLFNLFMNKLHGSIPDYIADLPNLESLALWMNNFTGTIPKNLGQNGRLQLLDLSTNKLTGTIPQDLCSENQLRILILMNNFLFGPIPDGLGTCTSLTKVRLGQNYLNGSIPNGFIYLPQLNLGEFQDNYLSGTLSENWEGSSNPIKLGQLNLSNNFLSGTLPFSLSNFSSLQILLLNGNQFSGTIPPSIGELNQLLKLDLSRNSLSGEIPLEIGNCIHLTYLDLSKNNLSGPIPPEISNAHILNYLNLSRNHLNESLPKSIGAMKSLTIADFSFNDFSGKLPESGQLAFFNASSFAGNPQLCGSFLNNPCNFETTTTKPGKTPAYFKLIFALGLLVCSLVFAIAAVVKAKSFKRNGSSSWKMTSFQKLEFTVYDVLECVKDGNVIGRGGAGIVYHGKMPNGVEIAVKKLLGFGPNSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLVYEYMRNGSLGEALHGKKASLIGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSNFEAHVADFGLAKFMFDGGASECMSVIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVVDIAQWCRRTILNGEKENDIICIVDKRVGMVPKEEAKHLFFIAMLCVQEKSVERPTMREVVQMLAEFSHQSPNNFQSSSSSSPCQNLKKGEKEKEDQLKSKLDLLV 1000
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 5597587 5605228 - Hsped.07g05280.1 Hepe07g0528 573923
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g0528 1000 Pfam Leucine Rich Repeat 524 545 IPR001611 GO:0005515(InterPro)
Hepe07g0528 1000 Pfam Leucine Rich Repeat 233 255 IPR001611 GO:0005515(InterPro)
Hepe07g0528 1000 Pfam Leucine Rich Repeat 353 373 IPR001611 GO:0005515(InterPro)
Hepe07g0528 1000 Pfam Leucine Rich Repeat 549 569 IPR001611 GO:0005515(InterPro)
Hepe07g0528 1000 Pfam Leucine Rich Repeat 501 522 IPR001611 GO:0005515(InterPro)
Hepe07g0528 1000 Pfam Leucine Rich Repeat 160 180 IPR001611 GO:0005515(InterPro)
Hepe07g0528 1000 Pfam Leucine Rich Repeat 281 302 IPR001611 GO:0005515(InterPro)
Hepe07g0528 1000 Pfam Leucine Rich Repeat 476 498 IPR001611 GO:0005515(InterPro)
Hepe07g0528 1000 Pfam Leucine Rich Repeat 453 474 IPR001611 GO:0005515(InterPro)
Hepe07g0528 1000 Pfam Leucine Rich Repeat 185 206 IPR001611 GO:0005515(InterPro)
Hepe07g0528 1000 Gene3D Phosphorylase Kinase; domain 1 649 761 - -
Hepe07g0528 1000 PANTHER RECEPTOR-LIKE PROTEIN 55 430 958 - -
Hepe07g0528 1000 SUPERFAMILY Protein kinase-like (PK-like) 669 958 IPR011009 -
Hepe07g0528 1000 Gene3D Ribonuclease Inhibitor 23 129 IPR032675 -
Hepe07g0528 1000 ProSiteProfiles Protein kinase domain profile. 685 962 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g0528 1000 PRINTS Leucine-rich repeat signature 354 367 - -
Hepe07g0528 1000 PRINTS Leucine-rich repeat signature 498 511 - -
Hepe07g0528 1000 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 331 620 - -
Hepe07g0528 1000 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 131 218 - -
Hepe07g0528 1000 Pfam Leucine rich repeat N-terminal domain 23 63 IPR013210 -
Hepe07g0528 1000 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 762 975 - -
Hepe07g0528 1000 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 654 761 - -
Hepe07g0528 1000 ProSitePatterns Serine/Threonine protein kinases active-site signature. 806 818 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe07g0528 1000 Pfam Protein tyrosine and serine/threonine kinase 688 958 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe07g0528 1000 SMART LRR_typ_2 255 278 IPR003591 -
Hepe07g0528 1000 SMART LRR_typ_2 498 522 IPR003591 -
Hepe07g0528 1000 SMART LRR_typ_2 134 157 IPR003591 -
Hepe07g0528 1000 SMART LRR_typ_2 279 303 IPR003591 -
Hepe07g0528 1000 SMART LRR_typ_2 327 351 IPR003591 -
Hepe07g0528 1000 Gene3D Transferase(Phosphotransferase) domain 1 762 984 - -
Hepe07g0528 1000 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 219 324 - -
Hepe07g0528 1000 Gene3D Ribonuclease Inhibitor 221 324 IPR032675 -
Hepe07g0528 1000 Gene3D Ribonuclease Inhibitor 130 220 IPR032675 -
Hepe07g0528 1000 Gene3D Ribonuclease Inhibitor 325 619 IPR032675 -
Hepe07g0528 1000 MobiDBLite consensus disorder prediction 965 980 - -
Hepe07g0528 1000 MobiDBLite consensus disorder prediction 965 1000 - -
Hepe07g0528 1000 SMART serkin_6 685 962 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g0528 1000 MobiDBLite consensus disorder prediction 981 1000 - -
Hepe07g0528 1000 SUPERFAMILY RNI-like 69 434 - -
Hepe07g0528 1000 SUPERFAMILY L domain-like 351 609 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe04g1361 Hepe-Chr4:69236277 Hepe07g0528 Hepe-Chr7:5597587 7.84e-71 dispersed
Hepe07g0528 Hepe-Chr7:5597587 Hepe07g0583 Hepe-Chr7:6307627 1.84e-155 dispersed
Hepe07g0528 Hepe-Chr7:5597587 Hepe04g1362 Hepe-Chr4:69258205 5.84e-159 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72918 PF07714 PK_Tyr_Ser-Thr 2.80E-43 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g0528 - - - 0.0