Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g0539 ATGGCTCTGGTCTTGTACTCATGGCAGACTAACAAAAATGCCTACAAGGCTTTTATTGCTGCCGAATACAATGGTGTCAAGGTTGACCTTTCCAAAGATTTTACAATGGGTGTAACCAACAAGAGTCCTGAATATCTTGAAATGAATCCCATTGGGAAGGTCCCCGTGCTGAAAGCATCTGATGGTGCCGTCTTTGAGAGCAATGCTATAGCTCGCTATGTTGCTCGCTTGAAGGACACTGGTTTATTTGGCTCTACTCCAATTGAATATGGACATATTGAACAATGGATTGATTACTCCACATTGGAAATTGATTCTCATATTTCAACTATTCTGAGGCCTAGATTTGGATATGGTGTTTACCATCCTATCGTAGAAGAAGCTGCAAATGCTGCCCTAAAACGGTCTTTGTCTGCTTTGAACTCTTACCTTGCTTCAAGGACATTCCTTGTTGGACATTCTGTGACACTGGCTGATATCATTGTGACATGCAATCTGTATTTGGGATTCACTTATATTTTGACTAAAAGCTTTACTTCTGAGTTCCCTCACGTTGAGAGGTACTTCTGGACATTGGTCAATCAACCAAAATTCAAAAAGATAATTGGTGAGGTCAAGCAGACCGATGCTATCCCACCAGTGAAAACACCTGAAGAGGCTGCGGCAGAAGCTGCCAAACAAAAGGCTGAGCCCAAGAAACAAGAAGAGAAGCCCAAGGCAGTAGCAGCTGCTGAGGAAGAGGCACCAAGGCCCAAGGTCAAGAATCCTCTTGACCTTCTTCCTCCCAGTCCGATGATTTTGGATGAGTGGAAACGCCTCTACTCGAACACCAAAACTAACTTCCGCGAGGTTGCAATCAAAGGATTCTGGGACATGTATGACCCTGAAGGTTACTCCCTTTGGTTCTGTGATTACAAGTACAACGACGAGAACACCGTTTCCTTTGTGACCCTGAACAAAGTTGGTGGATTCCTCCAGAGAATGGATCTTGCTCGCAAGTATGCCTTTGGAAAGATGCTCGTGATCGGATCAGAGGCACCCTACAAGGTGAAGGGGCTATGGCTTTTCCGTGGACAGGAAATCCCACAATTTGTGATCAACGAGTGCTACGATATGGAGCTGTACGAGTGGAAGAAGGTTGATCTCTCCGATGCAGCCCAGAAGGAGAGGGTGAACCAAATGATTGAAGACCAGGAACCATTCGAGGGAGAAGCTCTTTTGGATGCCAAATGCTTTAAGTGA 1242 45.01 MALVLYSWQTNKNAYKAFIAAEYNGVKVDLSKDFTMGVTNKSPEYLEMNPIGKVPVLKASDGAVFESNAIARYVARLKDTGLFGSTPIEYGHIEQWIDYSTLEIDSHISTILRPRFGYGVYHPIVEEAANAALKRSLSALNSYLASRTFLVGHSVTLADIIVTCNLYLGFTYILTKSFTSEFPHVERYFWTLVNQPKFKKIIGEVKQTDAIPPVKTPEEAAAEAAKQKAEPKKQEEKPKAVAAAEEEAPRPKVKNPLDLLPPSPMILDEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVGGFLQRMDLARKYAFGKMLVIGSEAPYKVKGLWLFRGQEIPQFVINECYDMELYEWKKVDLSDAAQKERVNQMIEDQEPFEGEALLDAKCFK 413
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 5697220 5700463 - Hsped.07g05390.1 Hepe07g0539 573934
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g0539 413 Gene3D Glutaredoxin 1 74 - -
Hepe07g0539 413 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 82 IPR004045 -
Hepe07g0539 413 FunFam Elongation factor 1B gamma 1 74 - -
Hepe07g0539 413 SMART EF1G_2 252 360 IPR001662 GO:0003746(InterPro)|GO:0006414(InterPro)
Hepe07g0539 413 FunFam Elongation factor 1 gamma 79 215 - -
Hepe07g0539 413 SFLD Main (cytGST) 3 189 - -
Hepe07g0539 413 CDD GST_N_EF1Bgamma 3 77 - -
Hepe07g0539 413 Pfam Glutathione S-transferase, C-terminal domain 127 196 IPR004046 -
Hepe07g0539 413 FunFam Elongation factor 1-gamma 1 253 413 - -
Hepe07g0539 413 Pfam Elongation factor 1 gamma, conserved domain 252 360 IPR001662 GO:0003746(InterPro)|GO:0006414(InterPro)
Hepe07g0539 413 Gene3D Translation elongation factor EF1B, gamma chain, conserved domain 253 413 IPR036433 GO:0003746(InterPro)|GO:0006414(InterPro)
Hepe07g0539 413 Gene3D - 79 212 - -
Hepe07g0539 413 MobiDBLite consensus disorder prediction 212 254 - -
Hepe07g0539 413 PANTHER ELONGATION FACTOR 1-GAMMA 1-RELATED 1 413 IPR044628 GO:0004364(InterPro)
Hepe07g0539 413 SUPERFAMILY GST C-terminal domain-like 73 210 IPR036282 -
Hepe07g0539 413 SFLD Glutathione Transferase (cytosolic) 3 189 IPR040079 -
Hepe07g0539 413 SUPERFAMILY Thioredoxin-like 2 78 IPR036249 -
Hepe07g0539 413 MobiDBLite consensus disorder prediction 221 253 - -
Hepe07g0539 413 Pfam Glutathione S-transferase, N-terminal domain 1 76 IPR004045 -
Hepe07g0539 413 SUPERFAMILY eEF1-gamma domain 254 413 IPR036433 GO:0003746(InterPro)|GO:0006414(InterPro)
Hepe07g0539 413 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 86 214 IPR010987 -
Hepe07g0539 413 CDD GST_C_EF1Bgamma_like 89 209 - -
Hepe07g0539 413 ProSiteProfiles Elongation factor 1 (EF-1) gamma C-terminal domain profile. 253 413 IPR001662 GO:0003746(InterPro)|GO:0006414(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g0150 Hepe-Chr1:26583188 Hepe07g0539 Hepe-Chr7:5697220 4.10e-226 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g0539 K03233 - csv:101215571 682.945