Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g0546 ATGGTTCATACTGGTGCATGCATTGCCTCATTACTGGGACAAGGAGGCTCTCGTAAATACCGCTTGACTTGGAAATGGCTCAGATACTTCAAAAATGATAGGGACAGGCGGGATTTGATCACTTGTGGTGCAGGAGCTGGTGTAGCAGCTGCCTTTCGGGCTCCAGTTGGTGGCGTTCTCTTCGCACTCGAAGAAGCAGCTTCATGGTGGAGGAGTGCTCTTCTCTGGAGGACCTTTTTCACTACTGCTGTAGTAGCCGTTGTCTTGAGGAGTTTCATGGAATTTTGCCGAGGGGGAAAATGTGGGTTATTTGGTGAAGGAGGTCTCATCATGTTCAACATCCATACAGAAAAGTCCTCTTACGGCATTCCAGATCTTATTGCAATTGTTATACTTGGAGTTTTTGGTGGTGTTCTTGGAAGCCTTTACAACTATCTCGTGGATAAGGTCCTCCGAACCTACAGCATCATAAATGAGCGAGGTCCCGGATCGAAAGTCATCCTTGTTGTTGTCATTTCCCTATTGACAACATGTGTTTCATTTGGTCTTCCTTGGTTCTCACGATGTTTACCTTGCCCACCTGGTTTGGTTGATCAATGCCCGACCATTGGTCGCTCAGGAAACTACAAGAACTTCCAATGCCCATCCGGCCATTATAATGATCTTGCTTCTTTATTTTTCAATACGAATGATGATGCCATTCGGAATCTGTTCATATCCGCTACTGACAAGCAATATCAGCTCTCCTCACTTTTTACCTTCTTTGCTGCTATCTATTGTCTTGGCATTATTACTTATGGCATTGCCTTGCCCTCGGGGCTCTTCATTCCTGTAATACTGGCAGGGGCCTCTTATGGCCGCATTGTAGGTAGATTGTTCGGTTCAGTTGCTACTCTTGATGTTGGTCTCTATGCCCTTCTCGGAGCTGCATCCTTCCTTGGTGGCACTATGAGAATGACTGTTTCTCTATGTGTCATTCTCCTTGAGCTTACGAATAACCTTTTGACGCTTCCATTACTAATGCTGGTTCTTCTGATTTCAAAGTCCGTGGCAGATCTTTTTAATAAAGGTGTCTATGATCAGATCATGAAGATGAAGGGACTACCTTTTATGGAAGCCCATGCAGAGCCATTTATGAGGCAATTGGTTGCTGGTGGTGTGGCTTCTGGTCCCTTAATTACCTTCTATGGGATCGAAAAGGTCGATAACATTATCAACGCGTTGAAAATGACAAACCACAATGGATTTCCTGTAATCGACCAACCGCCTTTCTCAGATGGTACAGAGCTTTGTGGGCTTGCTCTGAGGTCTCATCTGCTTGTTTTGCTTAAAGAAAAAAAATTTACGAAGCAAAAGGCATCAATTAGATCAGAAGTTTTGAGAACCTTCAAAGCACATGATTTTGCAAAAGCAGGTTCTGGCAAAGGGGTGAAGCTGGAAGATTTGGACATCAACGAGGAGGAGATGGAAATGTTTGTTGATCTTCATCCCATTACAAATACGTCGCCCTACACTGTGGTAGAAACAATGTCGCTAGCTAAAGCGGCGATTCTCTTTCACGCGCTCGGCTTGAGGCATTTGTTGGTGGTTCCGAAGACACCCGGGAGGCCTCCAATTGTTGGAATTCTTACAAGGCACGACTTCGTGCCCGAACATATTCTGGGACTTTACCCGCACCTCATCCCCAATGAGTAG 1695 45.19 MVHTGACIASLLGQGGSRKYRLTWKWLRYFKNDRDRRDLITCGAGAGVAAAFRAPVGGVLFALEEAASWWRSALLWRTFFTTAVVAVVLRSFMEFCRGGKCGLFGEGGLIMFNIHTEKSSYGIPDLIAIVILGVFGGVLGSLYNYLVDKVLRTYSIINERGPGSKVILVVVISLLTTCVSFGLPWFSRCLPCPPGLVDQCPTIGRSGNYKNFQCPSGHYNDLASLFFNTNDDAIRNLFISATDKQYQLSSLFTFFAAIYCLGIITYGIALPSGLFIPVILAGASYGRIVGRLFGSVATLDVGLYALLGAASFLGGTMRMTVSLCVILLELTNNLLTLPLLMLVLLISKSVADLFNKGVYDQIMKMKGLPFMEAHAEPFMRQLVAGGVASGPLITFYGIEKVDNIINALKMTNHNGFPVIDQPPFSDGTELCGLALRSHLLVLLKEKKFTKQKASIRSEVLRTFKAHDFAKAGSGKGVKLEDLDINEEEMEMFVDLHPITNTSPYTVVETMSLAKAAILFHALGLRHLLVVPKTPGRPPIVGILTRHDFVPEHILGLYPHLIPNE 564
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
7 5778568 5785865 + Hsped.07g05460.1 Hepe07g0546 573941
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g0546 564 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 1 552 IPR051280 GO:0009705(PANTHER)|GO:0015108(PANTHER)|GO:0043231(PANTHER)
Hepe07g0546 564 Pfam CBS domain 499 549 IPR000644 -
Hepe07g0546 564 SUPERFAMILY Clc chloride channel 1 373 IPR014743 -
Hepe07g0546 564 Gene3D Clc chloride channel 1 372 - -
Hepe07g0546 564 PRINTS Chloride channel signature 45 64 IPR001807 GO:0005247(InterPro)|GO:0006821(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe07g0546 564 PRINTS Chloride channel signature 302 318 IPR001807 GO:0005247(InterPro)|GO:0006821(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe07g0546 564 PRINTS Chloride channel signature 270 290 IPR001807 GO:0005247(InterPro)|GO:0006821(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe07g0546 564 PRINTS Chloride channel signature 358 372 IPR001807 GO:0005247(InterPro)|GO:0006821(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe07g0546 564 PRINTS Chloride channel signature 320 339 IPR001807 GO:0005247(InterPro)|GO:0006821(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe07g0546 564 Pfam Voltage gated chloride channel 1 351 IPR001807 GO:0005247(InterPro)|GO:0006821(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe07g0546 564 ProSiteProfiles CBS domain profile. 498 561 IPR000644 -
Hepe07g0546 564 CDD CBS_pair_voltage-gated_CLC_euk_bac 374 551 - -
Hepe07g0546 564 PRINTS Plant CLC chloride channel signature 66 74 IPR002251 GO:0005247(InterPro)|GO:0006821(InterPro)|GO:0016020(InterPro)
Hepe07g0546 564 PRINTS Plant CLC chloride channel signature 98 105 IPR002251 GO:0005247(InterPro)|GO:0006821(InterPro)|GO:0016020(InterPro)
Hepe07g0546 564 PRINTS Plant CLC chloride channel signature 80 90 IPR002251 GO:0005247(InterPro)|GO:0006821(InterPro)|GO:0016020(InterPro)
Hepe07g0546 564 PRINTS Plant CLC chloride channel signature 222 238 IPR002251 GO:0005247(InterPro)|GO:0006821(InterPro)|GO:0016020(InterPro)
Hepe07g0546 564 Gene3D - 398 548 IPR046342 -
Hepe07g0546 564 SUPERFAMILY CBS-domain pair 375 549 IPR046342 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe07g0546 Hepe-Chr7:5778568 Hepe08g2504 Hepe-Chr8:66312765 1.50e-246 dispersed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g0546 K05016 - csv:101209987 964.911