Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g0560 ATGGCGACTACCAAGGAGGAGAAAGAGCCAGTTTGTGTGACCGGAGCCAATGGATTCATCGGATCATGGGTCGTCCGTACGCTGTTGGAGGCCGGCTACACCGTTATTCATGCCTCAATCTTCCCCGGCTCCGATCCTTCCCATTTGTTCAATCTCCAGCTCTCCGCTAACCCTAATGCGAACCTTAGGGTTTTCGAAGCCGATGTAATGGACGGCGAGGCGGTGGCCAGGGCTGTGGAAGGCTGCAAGGGCGTATTCCATATCGCCTCGCCTTGCACGCTGGAGGATCCGATTGATCCGCTGAAAGAGCTGGTGGAACCGGCGGTGAAAGGTACTGTTAATGTTCTTGATGCTGCGAAGAAATGTGGAGTCAGGCGTGTTGTTCTCACTTCTTCCATTTCGGCTCTTGTTCCTAATCCTGGCTGGCCCGGTGTTAAGCCCTTCGATGAGTCCTCGTGGACGGACCTGGAGTACTGCAAATCGCGCAAGAAATGGTATCCAGTGTCCAAAACATTGGCAGAGAAAGCAGCATGGGAGTTTGTAGAGAAGCATGGAATGGATGTAGTTTCCATCCTTCCAGCCACATGCCTTGGTCCTCTTCTGCAGCCTAATTTGAATGCAAGTTGTGCTGTATTGCAGCAGCTGCTCCAGGGATCCAAGGATAGTCAGGAATATCACTGGTTGGGTGCTGTCCATGTCAAAGATATTGCGAAAGCACAAGTTCTATTGTTCGAGTCTCCCACTGCTTCTGGTAGATATCTTTGCACCAACGGTATCTATCAGTTTTCCGATTTTGCAGACGAAGTCTCGAAAATCTACCCTGAATTTCCGGTTCACAGATTTGTTGGAGAAACACAACCCGGCTTGGTTGCCTGCAAAGATGCAGCCAAGAGGTTAATTGATCTGGGACTTGTTTTCACCCCTCTTGAAGTTGCCATTCGAGATACGGTTGAGAGCCTTAGAAGCAAAGGCTTTTTGAAGCAGTGA 987 50.15 MATTKEEKEPVCVTGANGFIGSWVVRTLLEAGYTVIHASIFPGSDPSHLFNLQLSANPNANLRVFEADVMDGEAVARAVEGCKGVFHIASPCTLEDPIDPLKELVEPAVKGTVNVLDAAKKCGVRRVVLTSSISALVPNPGWPGVKPFDESSWTDLEYCKSRKKWYPVSKTLAEKAAWEFVEKHGMDVVSILPATCLGPLLQPNLNASCAVLQQLLQGSKDSQEYHWLGAVHVKDIAKAQVLLFESPTASGRYLCTNGIYQFSDFADEVSKIYPEFPVHRFVGETQPGLVACKDAAKRLIDLGLVFTPLEVAIRDTVESLRSKGFLKQ 328
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 6006051 6008939 + Hsped.07g05600.1 Hepe07g0560 573955
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g0560 328 CDD FR_SDR_e 11 304 - -
Hepe07g0560 328 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 11 319 IPR050425 GO:0016616(PANTHER)
Hepe07g0560 328 Gene3D - 2 328 - -
Hepe07g0560 328 Pfam NAD dependent epimerase/dehydratase family 11 249 IPR001509 -
Hepe07g0560 328 FunFam Cinnamoyl-CoA reductase 1 4 328 - -
Hepe07g0560 328 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 9 321 IPR036291 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe07g0560 Hepe-Chr7:6006051 Hepe10g1354 Hepe-Chr10:49771651 1.19e-102 dispersed
Hepe07g0560 Hepe-Chr7:6006051 Hepe03g1662 Hepe-Chr3:73479061 2.88e-80 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g0560 - - - 0.0