Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hepe07g0565 | ATGGTTGTCGTTGGTTCTTTGCAACTGTCCCATCATCTGGGACCCTGGAAGAACCATTTGCATGAAGAAAATCTTAAGTTTACCTCTCAGAGTAATAACATACGGTTATTGAGTGCAGCCAGTCCATCGCCTCTTTTTTTTCAGCAGAAGAACACTTGGAGCACTCATTTATTTAGTGTGAAATACCCACCTAATTACACCGTGCCTTCTAGATACAATGTATTTAGGTGCCATTCGTCAATGATGACAGGCCAACCACTGGATCCCCCTAGGGTGAAGGCTGCTATAGTGCCATTGACAAGGTTTTGTAATGTATTAGGTGGTTGTCCTCCTCCAGTGGTTAAGTTGGTTCCTGCAGTTTGTATTATCATGTTTGCTGTATGGGGTCTTGGACCATTTTTGCGTTATACTAGTAACCTACTCCATAGTGATAATAACTGGAAAAAAAGTCGGACATATCAAGTCATGATCTTGTATCTTCAACCATTATTGCTGTGGACTGGAGCAACACTTATTTGCAGAGCTTTGGATCCAGTAGTTTTACCTACAGAGTCTAGCCAAGTTGTGAAGCAACGGGTGTTGAATTTTGTTCGGTCATTGTCCACTGTGTTGGCCTTTGCGTTTTGCTTATCAAGTATGATTCAACAAGCACAGAAGTTCTTCTCAGAGACTAGCGATTCCAGTGATGCAAGAAATATGGGCTTTCAATTTGCTTGGAAAGCTGTATACTCTGCAGTATGGGTTGCTGCTGTCTTAGTGTTCATGGAGCTGCTGGGCTTTTCTACCCAAAAATGGCTTACAGCTGGAGGTCTTGGGACTGTGTTGCTGACATTAGCTGGCCGTGAGATTTTCACCAACTTCCTTTCAAGTGTGATGATTCATGCAACTCGTCCTTTTGTTGTTAATGAGTGGATTCAAACAAAGATTGAGGGCTGCGATGTTTCTGGCACTGTTGAGCATGTAGGATGGTGGTCGCCAACAATTATTAGAGGTGAAGATCGCGAAGCAGTTCACATACCAAACCATAAGTTTACAATGAACGTCGTTAGAAATCTCAGTCAAAAAACTCACTGGCGGATTAAAACCCACCTAGCCATCAGCCATTTGGACGTCAGTAAAATCAATAATATTGTCGCGGACATGCGGAAAGTCTTGGCAAAGAACCCTCAAGTTGAACAACAGAAATTGCATAGAAGAGTATTTTTGGAAAACGTGGATCCTGAAAATCAGGCACTTTTGATTTTGATATCTTGTTTTGTCAAGACTTCACATTTTGAAGAATACCTTTGTGTCAAGGAAGCTATAATGTTGGATCTTCTTAGAGTCATTAGACATCACCGGGCTCGACTTGCTACACCAATCCGCACAATGCAGAAGATGCATAGTGATTCGGACTTGGAAAGCGTTCCATTTTCTGATACAATATTTGGTCGTGGTGGTGGGACGACCACTTATAATCGCCGCACTCTGATGATTGAACCCTCCTACAAAGTTTATGGGGAAGATAGAAAGCAAAACAATAGTAGAACATCACGCACAACTGGAGAACAAACTGGTAAACCCATTGCACGGTCATCGGGCGACAGCAAGGCAGCTAAAGAGACAACACCATCTGATAGAAAGACAGAAGTCAAGACTGGAGAAGTAAGAGACTCTGATACAAAAAAGCATCCCAAAGTTTCGATATCAACCTCTGAAGATAAATCAAAAAATGAATTGAAACATAAATCATTATCAAGGCCTGCGTTGAGTACTAACAGTATCTCTGATATGCCTGCTTCTGATGCCAAAACAACTAAATCAGATGCTGGTAATTCATTTGAGGATTCCGGTACCAAGCAATCCGAAAATAGCTCGGGAAGTAACAAGCAGAACTACAAGCCTAGCCATCCTGCTATTTCCTTTCCGGAAGATGTTAAGAAACCAGGAGGAACTTCAGCAGCTTCGCAGCCAAGGATAGAAGGTGAACAGACACCAGTTCAAAATCCATCAACAATGAAGCCTGGCGTAGAAGAGAATATAATCCTTGGTGTTGCTTTGGATGGCTCTAAGAGAACACTTCCTATTGACGAGGACATCCCTTCTTCCCCTCAAACCGCATCGGGAGCGAAAGATTTGGCTTCATGCAGGAATGGGGCGAATGGGGCAACAACTCCGGATAAGGATACGAAACGTGAGGCTCCATCTTCTCCTACCAAATCTTCTAGTGAATAG | 2214 | 42.68 | MVVVGSLQLSHHLGPWKNHLHEENLKFTSQSNNIRLLSAASPSPLFFQQKNTWSTHLFSVKYPPNYTVPSRYNVFRCHSSMMTGQPLDPPRVKAAIVPLTRFCNVLGGCPPPVVKLVPAVCIIMFAVWGLGPFLRYTSNLLHSDNNWKKSRTYQVMILYLQPLLLWTGATLICRALDPVVLPTESSQVVKQRVLNFVRSLSTVLAFAFCLSSMIQQAQKFFSETSDSSDARNMGFQFAWKAVYSAVWVAAVLVFMELLGFSTQKWLTAGGLGTVLLTLAGREIFTNFLSSVMIHATRPFVVNEWIQTKIEGCDVSGTVEHVGWWSPTIIRGEDREAVHIPNHKFTMNVVRNLSQKTHWRIKTHLAISHLDVSKINNIVADMRKVLAKNPQVEQQKLHRRVFLENVDPENQALLILISCFVKTSHFEEYLCVKEAIMLDLLRVIRHHRARLATPIRTMQKMHSDSDLESVPFSDTIFGRGGGTTTYNRRTLMIEPSYKVYGEDRKQNNSRTSRTTGEQTGKPIARSSGDSKAAKETTPSDRKTEVKTGEVRDSDTKKHPKVSISTSEDKSKNELKHKSLSRPALSTNSISDMPASDAKTTKSDAGNSFEDSGTKQSENSSGSNKQNYKPSHPAISFPEDVKKPGGTSAASQPRIEGEQTPVQNPSTMKPGVEENIILGVALDGSKRTLPIDEDIPSSPQTASGAKDLASCRNGANGATTPDKDTKREAPSSPTKSSSE | 737 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 6069262 | 6078122 | - | Hsped.07g05650.1 | Hepe07g0565 | 573960 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hepe07g0565 | 737 | Gene3D | - | 299 | 354 | IPR023408 | - | |
| Hepe07g0565 | 737 | MobiDBLite | consensus disorder prediction | 533 | 577 | - | - | |
| Hepe07g0565 | 737 | MobiDBLite | consensus disorder prediction | 685 | 737 | - | - | |
| Hepe07g0565 | 737 | MobiDBLite | consensus disorder prediction | 578 | 629 | - | - | |
| Hepe07g0565 | 737 | Gene3D | - | 197 | 297 | - | - | |
| Hepe07g0565 | 737 | MobiDBLite | consensus disorder prediction | 496 | 671 | - | - | |
| Hepe07g0565 | 737 | SUPERFAMILY | Sm-like ribonucleoproteins | 283 | 353 | IPR010920 | - | |
| Hepe07g0565 | 737 | PANTHER | OW CONDUCTANCE MECHANOSENSITIVE CHANNEL | 1 | 721 | IPR045042 | - | |
| Hepe07g0565 | 737 | MobiDBLite | consensus disorder prediction | 510 | 532 | - | - | |
| Hepe07g0565 | 737 | MobiDBLite | consensus disorder prediction | 650 | 668 | - | - | |
| Hepe07g0565 | 737 | MobiDBLite | consensus disorder prediction | 692 | 718 | - | - | |
| Hepe07g0565 | 737 | Pfam | Mechanosensitive ion channel, beta-domain | 283 | 353 | IPR006685 | GO:0016020(InterPro)|GO:0055085(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Hepe07g0565 | Hepe-Chr7:6069262 | Hepe10g0430 | Hepe-Chr10:4813657 | 2.81e-232 | dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hepe07g0565 | K22047 | - | csv:101217250 | 1177.93 |