Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g0565 ATGGTTGTCGTTGGTTCTTTGCAACTGTCCCATCATCTGGGACCCTGGAAGAACCATTTGCATGAAGAAAATCTTAAGTTTACCTCTCAGAGTAATAACATACGGTTATTGAGTGCAGCCAGTCCATCGCCTCTTTTTTTTCAGCAGAAGAACACTTGGAGCACTCATTTATTTAGTGTGAAATACCCACCTAATTACACCGTGCCTTCTAGATACAATGTATTTAGGTGCCATTCGTCAATGATGACAGGCCAACCACTGGATCCCCCTAGGGTGAAGGCTGCTATAGTGCCATTGACAAGGTTTTGTAATGTATTAGGTGGTTGTCCTCCTCCAGTGGTTAAGTTGGTTCCTGCAGTTTGTATTATCATGTTTGCTGTATGGGGTCTTGGACCATTTTTGCGTTATACTAGTAACCTACTCCATAGTGATAATAACTGGAAAAAAAGTCGGACATATCAAGTCATGATCTTGTATCTTCAACCATTATTGCTGTGGACTGGAGCAACACTTATTTGCAGAGCTTTGGATCCAGTAGTTTTACCTACAGAGTCTAGCCAAGTTGTGAAGCAACGGGTGTTGAATTTTGTTCGGTCATTGTCCACTGTGTTGGCCTTTGCGTTTTGCTTATCAAGTATGATTCAACAAGCACAGAAGTTCTTCTCAGAGACTAGCGATTCCAGTGATGCAAGAAATATGGGCTTTCAATTTGCTTGGAAAGCTGTATACTCTGCAGTATGGGTTGCTGCTGTCTTAGTGTTCATGGAGCTGCTGGGCTTTTCTACCCAAAAATGGCTTACAGCTGGAGGTCTTGGGACTGTGTTGCTGACATTAGCTGGCCGTGAGATTTTCACCAACTTCCTTTCAAGTGTGATGATTCATGCAACTCGTCCTTTTGTTGTTAATGAGTGGATTCAAACAAAGATTGAGGGCTGCGATGTTTCTGGCACTGTTGAGCATGTAGGATGGTGGTCGCCAACAATTATTAGAGGTGAAGATCGCGAAGCAGTTCACATACCAAACCATAAGTTTACAATGAACGTCGTTAGAAATCTCAGTCAAAAAACTCACTGGCGGATTAAAACCCACCTAGCCATCAGCCATTTGGACGTCAGTAAAATCAATAATATTGTCGCGGACATGCGGAAAGTCTTGGCAAAGAACCCTCAAGTTGAACAACAGAAATTGCATAGAAGAGTATTTTTGGAAAACGTGGATCCTGAAAATCAGGCACTTTTGATTTTGATATCTTGTTTTGTCAAGACTTCACATTTTGAAGAATACCTTTGTGTCAAGGAAGCTATAATGTTGGATCTTCTTAGAGTCATTAGACATCACCGGGCTCGACTTGCTACACCAATCCGCACAATGCAGAAGATGCATAGTGATTCGGACTTGGAAAGCGTTCCATTTTCTGATACAATATTTGGTCGTGGTGGTGGGACGACCACTTATAATCGCCGCACTCTGATGATTGAACCCTCCTACAAAGTTTATGGGGAAGATAGAAAGCAAAACAATAGTAGAACATCACGCACAACTGGAGAACAAACTGGTAAACCCATTGCACGGTCATCGGGCGACAGCAAGGCAGCTAAAGAGACAACACCATCTGATAGAAAGACAGAAGTCAAGACTGGAGAAGTAAGAGACTCTGATACAAAAAAGCATCCCAAAGTTTCGATATCAACCTCTGAAGATAAATCAAAAAATGAATTGAAACATAAATCATTATCAAGGCCTGCGTTGAGTACTAACAGTATCTCTGATATGCCTGCTTCTGATGCCAAAACAACTAAATCAGATGCTGGTAATTCATTTGAGGATTCCGGTACCAAGCAATCCGAAAATAGCTCGGGAAGTAACAAGCAGAACTACAAGCCTAGCCATCCTGCTATTTCCTTTCCGGAAGATGTTAAGAAACCAGGAGGAACTTCAGCAGCTTCGCAGCCAAGGATAGAAGGTGAACAGACACCAGTTCAAAATCCATCAACAATGAAGCCTGGCGTAGAAGAGAATATAATCCTTGGTGTTGCTTTGGATGGCTCTAAGAGAACACTTCCTATTGACGAGGACATCCCTTCTTCCCCTCAAACCGCATCGGGAGCGAAAGATTTGGCTTCATGCAGGAATGGGGCGAATGGGGCAACAACTCCGGATAAGGATACGAAACGTGAGGCTCCATCTTCTCCTACCAAATCTTCTAGTGAATAG 2214 42.68 MVVVGSLQLSHHLGPWKNHLHEENLKFTSQSNNIRLLSAASPSPLFFQQKNTWSTHLFSVKYPPNYTVPSRYNVFRCHSSMMTGQPLDPPRVKAAIVPLTRFCNVLGGCPPPVVKLVPAVCIIMFAVWGLGPFLRYTSNLLHSDNNWKKSRTYQVMILYLQPLLLWTGATLICRALDPVVLPTESSQVVKQRVLNFVRSLSTVLAFAFCLSSMIQQAQKFFSETSDSSDARNMGFQFAWKAVYSAVWVAAVLVFMELLGFSTQKWLTAGGLGTVLLTLAGREIFTNFLSSVMIHATRPFVVNEWIQTKIEGCDVSGTVEHVGWWSPTIIRGEDREAVHIPNHKFTMNVVRNLSQKTHWRIKTHLAISHLDVSKINNIVADMRKVLAKNPQVEQQKLHRRVFLENVDPENQALLILISCFVKTSHFEEYLCVKEAIMLDLLRVIRHHRARLATPIRTMQKMHSDSDLESVPFSDTIFGRGGGTTTYNRRTLMIEPSYKVYGEDRKQNNSRTSRTTGEQTGKPIARSSGDSKAAKETTPSDRKTEVKTGEVRDSDTKKHPKVSISTSEDKSKNELKHKSLSRPALSTNSISDMPASDAKTTKSDAGNSFEDSGTKQSENSSGSNKQNYKPSHPAISFPEDVKKPGGTSAASQPRIEGEQTPVQNPSTMKPGVEENIILGVALDGSKRTLPIDEDIPSSPQTASGAKDLASCRNGANGATTPDKDTKREAPSSPTKSSSE 737
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
7 6069262 6078122 - Hsped.07g05650.1 Hepe07g0565 573960
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g0565 737 Gene3D - 299 354 IPR023408 -
Hepe07g0565 737 MobiDBLite consensus disorder prediction 533 577 - -
Hepe07g0565 737 MobiDBLite consensus disorder prediction 685 737 - -
Hepe07g0565 737 MobiDBLite consensus disorder prediction 578 629 - -
Hepe07g0565 737 Gene3D - 197 297 - -
Hepe07g0565 737 MobiDBLite consensus disorder prediction 496 671 - -
Hepe07g0565 737 SUPERFAMILY Sm-like ribonucleoproteins 283 353 IPR010920 -
Hepe07g0565 737 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 1 721 IPR045042 -
Hepe07g0565 737 MobiDBLite consensus disorder prediction 510 532 - -
Hepe07g0565 737 MobiDBLite consensus disorder prediction 650 668 - -
Hepe07g0565 737 MobiDBLite consensus disorder prediction 692 718 - -
Hepe07g0565 737 Pfam Mechanosensitive ion channel, beta-domain 283 353 IPR006685 GO:0016020(InterPro)|GO:0055085(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe07g0565 Hepe-Chr7:6069262 Hepe10g0430 Hepe-Chr10:4813657 2.81e-232 dispersed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g0565 K22047 - csv:101217250 1177.93