Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g0591 ATGGGTTTTGATAATCTTTCTCACACAGCCTTGGTTTTGGGCTTAGGGCTCTCAGAAGCTTCTCCAATTATTCTTAATAAGTTGAAGAACAAGAAGCCTGCTGCTCCTTGCTCCTCTAGCTCACTCGATTTCGAGCCTTGTGCTTTGACTCTAGGGTTTTCCGGCCGCGACACGCACCGGAAAGTTGACAACATCGATGTGGGTGTTGTTGTTGATCATCCTCATCATCATTTGTATCGCCAATCTTCCCCTCATAGCAGCGCGGTTTGTTCTTCCTTCTCGGGCGGCGGCGGTGGCGGTAGCGGTAGCGGTAGGGTTAAAAGGGAGAGAGATCTTAGCAGTGAAGAAGTGGAATTGGAGAGAGTTTGTTCTAGAGTTAGTGATGAAGATGAAGATGGTTCTAATACGAGAAAGAAACTTAGGCTCTCTAAACAACAATCTGCTCTCTTGGAAGAAAGTTTCAAACTAAATAGCACTCTCAACCCTAAGCAAAAACAAGCTTTAGCAAGACAGCTAAATCTACGGCCACGACAAGTTGAAGTATGGTTTCAAAATAGGAGAGCCAGAACAAAATTGAAACAAACAGAAGTAGATTGTGAGTTTCTGAAGAAGTGTTGCGAGACGCTAACAAATGAAAATAGAAGACTACAAAAAGAGCTTCAAGAATTGAAGGCACTAAAGCTCGCGCAGCCGCTATACATGCACATGCCAGCGGCAACGCTAGCGATGTGCCCGTCATGTGAAAGGGTCGGCGGTGTCGGGGACGGTGCTTCCAAACCCAAATTTTCAATGGCTCCTAAGCCTCACTTTTACAACCCCTTCTCCAATCCTTCAGCCGCATGTTAG 846 45.86 MGFDNLSHTALVLGLGLSEASPIILNKLKNKKPAAPCSSSSLDFEPCALTLGFSGRDTHRKVDNIDVGVVVDHPHHHLYRQSSPHSSAVCSSFSGGGGGGSGSGRVKRERDLSSEEVELERVCSRVSDEDEDGSNTRKKLRLSKQQSALLEESFKLNSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTNENRRLQKELQELKALKLAQPLYMHMPAATLAMCPSCERVGGVGDGASKPKFSMAPKPHFYNPFSNPSAAC 281
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 6437643 6439678 + Hsped.07g05910.1 Hepe07g0591 573986
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g0591 281 Gene3D - 130 198 - -
Hepe07g0591 281 CDD homeodomain 137 194 IPR001356 GO:0003677(InterPro)
Hepe07g0591 281 Pfam Homeodomain 137 191 IPR001356 GO:0003677(InterPro)
Hepe07g0591 281 Coils Coil 199 229 - -
Hepe07g0591 281 Pfam Homeobox associated leucine zipper 193 227 IPR003106 GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe07g0591 281 MobiDBLite consensus disorder prediction 79 113 - -
Hepe07g0591 281 ProSiteProfiles 'Homeobox' domain profile. 133 193 IPR001356 GO:0003677(InterPro)
Hepe07g0591 281 ProSitePatterns 'Homeobox' domain signature. 168 191 IPR017970 GO:0000981(InterPro)|GO:0006355(InterPro)
Hepe07g0591 281 SMART halz 193 236 IPR003106 GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe07g0591 281 SUPERFAMILY Homeodomain-like 126 194 IPR009057 -
Hepe07g0591 281 FunFam Homeobox-leucine zipper protein 18 123 198 - -
Hepe07g0591 281 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 75 273 IPR050762 -
Hepe07g0591 281 MobiDBLite consensus disorder prediction 81 98 - -
Hepe07g0591 281 SMART HOX_1 135 197 IPR001356 GO:0003677(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g1859 Hepe-Chr1:83530720 Hepe07g0591 Hepe-Chr7:6437643 7.97e-61 dispersed
Hepe02g2673 Hepe-Chr2:74407427 Hepe07g0591 Hepe-Chr7:6437643 5.83e-41 dispersed
Hepe05g0516 Hepe-Chr5:7049597 Hepe07g0591 Hepe-Chr7:6437643 1.51e-61 dispersed
Hepe06g1115 Hepe-Chr6:59825483 Hepe07g0591 Hepe-Chr7:6437643 1.29e-59 dispersed
Hepe07g0591 Hepe-Chr7:6437643 Hepe09g0430 Hepe-Chr9:3892704 3.47e-49 dispersed
Hepe07g0591 Hepe-Chr7:6437643 Hepe07g0597 Hepe-Chr7:6530328 1.36e-10 proximal
Hepe04g1352 Hepe-Chr4:69173731 Hepe07g0591 Hepe-Chr7:6437643 1.73e-100 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
55914 PF00046 Homeodomain 1.20E-15 CL0123 Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g0591 K09338 - csv:101205848 363.999