Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g0627 ATGCCAGAACTTAAGCATGGGGAGCCTATTTTAGATTGGCCTACTCGAAAACGTGTGGCATTGGGCACAGCTCGTGGTCTAGGATATCTTCACGAACATTGCAATCCAAAGATTATTCACCGAGATGTTAAGGCTGCTAATGTATTGCTTGATGAGGATTTTGAAGCAGTTGTTGGCGATTTTGGCCTAGCAAAGTTGGTTGATGTTAGGAAGACTAATGTCACAACTCAAGTTCGGGGGACGGTTGGCCACATAGCACCAGAGTACTTATCCACTGGAAAATCATCAGAAAAGACCGATGTTTTTGGTTATGGCATTATGCTTTTAGAACTTATTACAGGGCAACGTGCAATTGACTTCTCACGCTATGAAGGGGATGATGATGTTTTACTGCTCGACCATGTAAAAAAATTGGAAAGGGAGAAGCGACTCAATGATATTGTGGATGAAAACCTGAATAACTATGATATTAAAGAGGTGGAGATGGTGACCCAAGTTGCACTACTGTGCACGCAGTCATCTTCGAACGGTCGACCGACAATGTCACAGGTCGTTCGGATGCTGGAGGGCGAGGGGCTTGCAGAGAGGTGGGAAGAATGGCAGCATTTAGAGGTGACTCGCAGACAAGATTATGAGAGAATGCAAAGAAGATTTGAATTGGGGGATGATTCCATTTATAAACAGGAACCCATCCATTTATCTGGTGGAAGATGA 714 43.98 MPELKHGEPILDWPTRKRVALGTARGLGYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTVGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAIDFSRYEGDDDVLLLDHVKKLEREKRLNDIVDENLNNYDIKEVEMVTQVALLCTQSSSNGRPTMSQVVRMLEGEGLAERWEEWQHLEVTRRQDYERMQRRFELGDDSIYKQEPIHLSGGR 237
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 6917442 6918408 + Hsped.07g06270.1 Hepe07g0627 574022
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g0627 237 Pfam Protein kinase domain 16 186 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g0627 237 SMART serkin_6 3 188 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g0627 237 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 8 234 - -
Hepe07g0627 237 ProSiteProfiles Protein kinase domain profile. 1 193 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g0627 237 SUPERFAMILY Protein kinase-like (PK-like) 6 189 IPR011009 -
Hepe07g0627 237 FunFam Somatic embryogenesis receptor-like kinase 1 1 208 - -
Hepe07g0627 237 ProSitePatterns Serine/Threonine protein kinases active-site signature. 38 50 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe07g0627 237 Gene3D Transferase(Phosphotransferase) domain 1 3 208 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe07g0627 Hepe-Chr7:6917442 Hepe08g1197 Hepe-Chr8:12341898 1.59e-107 dispersed
Hepe07g0624 Hepe-Chr7:6876850 Hepe07g0627 Hepe-Chr7:6917442 1.56e-138 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72925 PF00069 Pkinase 1.70E-25 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g0627 - - - 0.0