Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe07g0658 | ATGAACTCATCATCCACTAAATTTTACAATCCAGGGAGGATGGGATTGTATGAACCTATCCACCAGATTGGAATGTGGGGAGAAACTTTTAGAGCCAATGTCAATTTAGATGCACCACCACCATCTCTTATCATCGACGCGGATGCCAAATTAGAAAATCAGTCAGACGATGCTTCGCTCGGCTCACTTGGAGATCCTCACATATATGACCAAGATGATACCAAACGTGTTGATAAGATTCAAAGACGGCTCGCCCAAAATCGGGAAGCAGCTCGCAAAAGTCGGCTGAGAAAAAAGGCCTATATCAAGCAATTGGAAACAAGCCGCTTGAAACTCATTCAATTAGAGCAAGAACTTGAAAAAGCAAGACAACAAGGTTTGTTTGCTGGATCCCGATTTGATAATAACCAGTTGGGTATCTCTGGAACCACAAATTCAGGCATTTCAGCATTTGAATCAGAGTACGAGCAATGGGTAGAGGAGCAGAGCAGGCAGATTTGTGAACTGAGGGCTGCTGTGCATGCTGATATTACGGATATCGAGCTTCGAATACTTGTAGAAAATGCAATGAGACACTACTTTAAATTTTTTCGCATGAAAGCTAAAGCCGCGAAAGCCGATGTCTCTTACATAATGTCGGGCATGTGGAAAACATCAGCCGAACGACTTTTCTTATGGATCGGAGGATTTCGCCCTTCAGAACTTCTTAAGGTTTTAATACCTCAGCTGGAGATGACCGATCAACAAATGTCGGAAACTGGTAGCCTTAGGAAATCGTGTCTACAAGCGGAAGATGCTCTAAGACAAGGTATGGAAAAGCTCCAACAAAATCTATTTGAAAGCGTAGTGGCTGGTCAGCTGGGTGAAGGAAGTTATCCCCTGCAGATGACTGCTGCAATGGAGAGATTAGAAGCACTCATTAGCTTTGTAAATCAGGCTGACCATCTACGACAGGAAACCTTGCAACAGATGTACAAAATTCTAACAACTCGGCAATCTGCTCAAGGCCTTCTTACTCTAGGGGAGTTTTTCCAACGACTCCGAGCATTGAGCTCGCTTTGGGCGAACCGTCCTTGTGAGCCTGCATAG | 1089 | 44.17 | MNSSSTKFYNPGRMGLYEPIHQIGMWGETFRANVNLDAPPPSLIIDADAKLENQSDDASLGSLGDPHIYDQDDTKRVDKIQRRLAQNREAARKSRLRKKAYIKQLETSRLKLIQLEQELEKARQQGLFAGSRFDNNQLGISGTTNSGISAFESEYEQWVEEQSRQICELRAAVHADITDIELRILVENAMRHYFKFFRMKAKAAKADVSYIMSGMWKTSAERLFLWIGGFRPSELLKVLIPQLEMTDQQMSETGSLRKSCLQAEDALRQGMEKLQQNLFESVVAGQLGEGSYPLQMTAAMERLEALISFVNQADHLRQETLQQMYKILTTRQSAQGLLTLGEFFQRLRALSSLWANRPCEPA | 362 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 7560779 | 7567589 | + | Hsped.07g06580.1 | Hepe07g0658 | 574053 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe07g0658 | 362 | ProSiteProfiles | DOG1 domain profile. | 148 | 357 | IPR025422 | GO:0006351(InterPro)|GO:0043565(InterPro) | |
Hepe07g0658 | 362 | FunFam | BZIP family transcription factor | 78 | 127 | - | - | |
Hepe07g0658 | 362 | SUPERFAMILY | Leucine zipper domain | 80 | 121 | IPR046347 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe07g0658 | 362 | PANTHER | TRANSCRIPTION FACTOR TGA9 | 2 | 361 | - | - | |
Hepe07g0658 | 362 | SMART | brlzneu | 75 | 137 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe07g0658 | 362 | Gene3D | - | 78 | 127 | - | - | |
Hepe07g0658 | 362 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 82 | 97 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe07g0658 | 362 | Pfam | Seed dormancy control | 165 | 240 | IPR025422 | GO:0006351(InterPro)|GO:0043565(InterPro) | |
Hepe07g0658 | 362 | Coils | Coil | 98 | 125 | - | - | |
Hepe07g0658 | 362 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 77 | 121 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe07g0658 | 362 | Pfam | bZIP transcription factor | 78 | 113 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe02g3445 | Hepe-Chr2:83814221 | Hepe07g0658 | Hepe-Chr7:7560779 | 1.57e-103 | dispersed | |
Hepe07g0658 | Hepe-Chr7:7560779 | Hepe10g0543 | Hepe-Chr10:6451084 | 1.83e-94 | dispersed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
55920 | PF14144 | DOG1 | 4.60E-29 | No_clan | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe07g0658 | K14431 | - | csv:116401613 | 660.988 |