Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g0658 ATGAACTCATCATCCACTAAATTTTACAATCCAGGGAGGATGGGATTGTATGAACCTATCCACCAGATTGGAATGTGGGGAGAAACTTTTAGAGCCAATGTCAATTTAGATGCACCACCACCATCTCTTATCATCGACGCGGATGCCAAATTAGAAAATCAGTCAGACGATGCTTCGCTCGGCTCACTTGGAGATCCTCACATATATGACCAAGATGATACCAAACGTGTTGATAAGATTCAAAGACGGCTCGCCCAAAATCGGGAAGCAGCTCGCAAAAGTCGGCTGAGAAAAAAGGCCTATATCAAGCAATTGGAAACAAGCCGCTTGAAACTCATTCAATTAGAGCAAGAACTTGAAAAAGCAAGACAACAAGGTTTGTTTGCTGGATCCCGATTTGATAATAACCAGTTGGGTATCTCTGGAACCACAAATTCAGGCATTTCAGCATTTGAATCAGAGTACGAGCAATGGGTAGAGGAGCAGAGCAGGCAGATTTGTGAACTGAGGGCTGCTGTGCATGCTGATATTACGGATATCGAGCTTCGAATACTTGTAGAAAATGCAATGAGACACTACTTTAAATTTTTTCGCATGAAAGCTAAAGCCGCGAAAGCCGATGTCTCTTACATAATGTCGGGCATGTGGAAAACATCAGCCGAACGACTTTTCTTATGGATCGGAGGATTTCGCCCTTCAGAACTTCTTAAGGTTTTAATACCTCAGCTGGAGATGACCGATCAACAAATGTCGGAAACTGGTAGCCTTAGGAAATCGTGTCTACAAGCGGAAGATGCTCTAAGACAAGGTATGGAAAAGCTCCAACAAAATCTATTTGAAAGCGTAGTGGCTGGTCAGCTGGGTGAAGGAAGTTATCCCCTGCAGATGACTGCTGCAATGGAGAGATTAGAAGCACTCATTAGCTTTGTAAATCAGGCTGACCATCTACGACAGGAAACCTTGCAACAGATGTACAAAATTCTAACAACTCGGCAATCTGCTCAAGGCCTTCTTACTCTAGGGGAGTTTTTCCAACGACTCCGAGCATTGAGCTCGCTTTGGGCGAACCGTCCTTGTGAGCCTGCATAG 1089 44.17 MNSSSTKFYNPGRMGLYEPIHQIGMWGETFRANVNLDAPPPSLIIDADAKLENQSDDASLGSLGDPHIYDQDDTKRVDKIQRRLAQNREAARKSRLRKKAYIKQLETSRLKLIQLEQELEKARQQGLFAGSRFDNNQLGISGTTNSGISAFESEYEQWVEEQSRQICELRAAVHADITDIELRILVENAMRHYFKFFRMKAKAAKADVSYIMSGMWKTSAERLFLWIGGFRPSELLKVLIPQLEMTDQQMSETGSLRKSCLQAEDALRQGMEKLQQNLFESVVAGQLGEGSYPLQMTAAMERLEALISFVNQADHLRQETLQQMYKILTTRQSAQGLLTLGEFFQRLRALSSLWANRPCEPA 362
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 7560779 7567589 + Hsped.07g06580.1 Hepe07g0658 574053
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g0658 362 ProSiteProfiles DOG1 domain profile. 148 357 IPR025422 GO:0006351(InterPro)|GO:0043565(InterPro)
Hepe07g0658 362 FunFam BZIP family transcription factor 78 127 - -
Hepe07g0658 362 SUPERFAMILY Leucine zipper domain 80 121 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe07g0658 362 PANTHER TRANSCRIPTION FACTOR TGA9 2 361 - -
Hepe07g0658 362 SMART brlzneu 75 137 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe07g0658 362 Gene3D - 78 127 - -
Hepe07g0658 362 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 82 97 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe07g0658 362 Pfam Seed dormancy control 165 240 IPR025422 GO:0006351(InterPro)|GO:0043565(InterPro)
Hepe07g0658 362 Coils Coil 98 125 - -
Hepe07g0658 362 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 77 121 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe07g0658 362 Pfam bZIP transcription factor 78 113 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g3445 Hepe-Chr2:83814221 Hepe07g0658 Hepe-Chr7:7560779 1.57e-103 dispersed
Hepe07g0658 Hepe-Chr7:7560779 Hepe10g0543 Hepe-Chr10:6451084 1.83e-94 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
55920 PF14144 DOG1 4.60E-29 No_clan Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g0658 K14431 - csv:116401613 660.988