Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe07g0675 | ATGGGTTCAATATTTGATGAGACGATTGCTCCGGGGTCGGACTCTCTATCTCCACCGTCGGATTCATTGCCGTCGTCATCACCTGATTCATCGTCATCGTCACCACCGGCACCACCGTCTGCCGATGCCGATGCCGATCGTTCTCCTCCACCATCACCACCAAAGGATGACTCCTCCTCCGAATCATCATCGCGCCCATCAGGTTCTCCATCGCCAAAGTCGTCGCGGTCGAATGGCTCTTCCGATGATAACAAATCGGATTCAGCTTCAAAAGGGGGCAGCCCTCGGTCGTCACCGTCCGATTCTCATTCTTCTCCATCTCGGTCTTCGTCCCCAGGAGATGCATTGCCTTCGTCGGAAGGAAAATCGTCGTCGAGAGCAAGACAACAAGCAAAGGACGGTGACGATTCACCGTCGCCGTCGGATATCAACCCAGGGATTATAATTGGGGTGGCGGTGGGGGTGGCGGTATTCATAATTGTTCTCATATCAATAATTGCAGTGTGTTCGAAGAAGAAGAAGCGGAAGGGAGATCATATGCAATATTATGGAGATCATGGACCTAATAAAGGTGGAGGTGGTGACTATTACAATAGTGCACAACAACAAAATTGGCACAACAACGGCATGCACGGTCCCGGGACGGACCAATTCGGGAGGCCACCGCCATCGGGCTCCCCGGGCGGGTGGCCGATGAGTGGCGACAACATGACGACGGGCAGCACCTACACAGGCCCTCCTCTTCCTCCACCATCACCATCGATTGCGTTTGGGTTCAACAAGAGCACGTTCACGTACGACGAGCTTGCGGCAGCAACGAGCGGGTTCGCGCACGGGAACCTTCTCGGGCAGGGCGGGTTCGGGTACGTGCACAAGGGAGTGTTGCCGAACGGAAAGGAGGTGGCCGTGAAGAGCCTGAAGGCGGGCAGCGGGCAGGGGGAGAGGGAGTTCATGGCTGAGGTTGAGATTATTAGCAGAGTCCACCACCGGCATTTGGTGTCCTTGGTTGGCTTTTGCATTTCCGGTGGACAAAGAATGTTGGTCTATGAGTTTGTCCCTAACAACACCTTGGAGCATCACCTTCATGGGAAAGGTGTTCGAGCAATGGATTGGGCATTCAGACTTCGTATTGCTATAGGTTCTGCCAAGGGTCTTGCTTACCTTCATGAGGATTGTCATCCAAAGATTATTCATCGAGATATCAAGACTGCTAATATTCTAATTGATACCAATTTTGAAGCAATGGTGGCAGATTTTGGATTAGCTAAGCTATCTACAGATAATCACACACATGTCTCCACCAGAGTCATGGGTACATTTGGGTATTTGGCACCAGAATATGCATCAAGCGGGAAATTGACAGAAAAGTCCGACGTGTTCTCATTTGGTGTAATGTTGTTGGAACTCATCACTGGAAAACGACCTGTCGATCCTACTAATGTCATGGAAGATAGCTTAGTCGATTGGGCTCGACCACTTATGTCTCGAGCCTTGGGAGAAGGCATCTATGAAGAGTTGGTGGATATACGGTTAGAAAATGAGTTCAACACTCCGGAGATGGCTCGCATGGTGGCTTGTGCTGCTGCTTCCATCCGTCATTCGGCTAGAAAACGCCCCAAAATGAGTCAGGTAGTACGAGCTTTAGAAGGGGATGTATCATTGGATGATCTAAACGAAGGGATAAGGCCAGGACAAAGCTCAATTTACAATGTTGGCACCACCTCCGAATATGATTCAAATGCGTACCAAGCCGACATGTCAAAATTCAGGAAAATAGCTTTGTCAGATGATAGCAGTGAGCTTGCAACTTCTAGCAATGACTCGAGAGAGATGAACCATCCGGTCGGGACCCAAAGGCCGCCGCTCTTGTGA | 1872 | 50.53 | MGSIFDETIAPGSDSLSPPSDSLPSSSPDSSSSSPPAPPSADADADRSPPPSPPKDDSSSESSSRPSGSPSPKSSRSNGSSDDNKSDSASKGGSPRSSPSDSHSSPSRSSSPGDALPSSEGKSSSRARQQAKDGDDSPSPSDINPGIIIGVAVGVAVFIIVLISIIAVCSKKKKRKGDHMQYYGDHGPNKGGGGDYYNSAQQQNWHNNGMHGPGTDQFGRPPPSGSPGGWPMSGDNMTTGSTYTGPPLPPPSPSIAFGFNKSTFTYDELAAATSGFAHGNLLGQGGFGYVHKGVLPNGKEVAVKSLKAGSGQGEREFMAEVEIISRVHHRHLVSLVGFCISGGQRMLVYEFVPNNTLEHHLHGKGVRAMDWAFRLRIAIGSAKGLAYLHEDCHPKIIHRDIKTANILIDTNFEAMVADFGLAKLSTDNHTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGKRPVDPTNVMEDSLVDWARPLMSRALGEGIYEELVDIRLENEFNTPEMARMVACAAASIRHSARKRPKMSQVVRALEGDVSLDDLNEGIRPGQSSIYNVGTTSEYDSNAYQADMSKFRKIALSDDSSELATSSNDSREMNHPVGTQRPPLL | 623 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 7855223 | 7861488 | - | Hsped.07g06750.1 | Hepe07g0675 | 574070 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe07g0675 | 623 | FunFam | Proline-rich receptor-like protein kinase PERK1 | 352 | 559 | - | - | |
Hepe07g0675 | 623 | PANTHER | PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 | 114 | 592 | IPR047117 | - | |
Hepe07g0675 | 623 | MobiDBLite | consensus disorder prediction | 1 | 142 | - | - | |
Hepe07g0675 | 623 | CDD | STKc_IRAK | 282 | 550 | - | - | |
Hepe07g0675 | 623 | SUPERFAMILY | Protein kinase-like (PK-like) | 250 | 548 | IPR011009 | - | |
Hepe07g0675 | 623 | SMART | serkin_6 | 276 | 548 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe07g0675 | 623 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 396 | 408 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Hepe07g0675 | 623 | MobiDBLite | consensus disorder prediction | 596 | 623 | - | - | |
Hepe07g0675 | 623 | MobiDBLite | consensus disorder prediction | 597 | 613 | - | - | |
Hepe07g0675 | 623 | Gene3D | Transferase(Phosphotransferase) domain 1 | 352 | 559 | - | - | |
Hepe07g0675 | 623 | ProSitePatterns | Protein kinases ATP-binding region signature. | 282 | 304 | IPR017441 | GO:0005524(InterPro) | |
Hepe07g0675 | 623 | FunFam | proline-rich receptor-like protein kinase PERK1 | 254 | 351 | - | - | |
Hepe07g0675 | 623 | Pfam | Protein tyrosine and serine/threonine kinase | 280 | 494 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Hepe07g0675 | 623 | MobiDBLite | consensus disorder prediction | 57 | 125 | - | - | |
Hepe07g0675 | 623 | MobiDBLite | consensus disorder prediction | 13 | 30 | - | - | |
Hepe07g0675 | 623 | Gene3D | Phosphorylase Kinase; domain 1 | 252 | 351 | - | - | |
Hepe07g0675 | 623 | MobiDBLite | consensus disorder prediction | 42 | 56 | - | - | |
Hepe07g0675 | 623 | MobiDBLite | consensus disorder prediction | 210 | 250 | - | - | |
Hepe07g0675 | 623 | ProSiteProfiles | Protein kinase domain profile. | 276 | 554 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe07g0675 | Hepe-Chr7:7855223 | Hepe08g1024 | Hepe-Chr8:9837175 | 9.33e-189 | dispersed | |
Hepe04g1490 | Hepe-Chr4:70535241 | Hepe07g0675 | Hepe-Chr7:7855223 | 5.21e-19 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
72926 | PF07714 | PK_Tyr_Ser-Thr | 3.00E-46 | CL0016 | Hepe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe07g0675 | - | - | - | 0.0 |