Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g0675 ATGGGTTCAATATTTGATGAGACGATTGCTCCGGGGTCGGACTCTCTATCTCCACCGTCGGATTCATTGCCGTCGTCATCACCTGATTCATCGTCATCGTCACCACCGGCACCACCGTCTGCCGATGCCGATGCCGATCGTTCTCCTCCACCATCACCACCAAAGGATGACTCCTCCTCCGAATCATCATCGCGCCCATCAGGTTCTCCATCGCCAAAGTCGTCGCGGTCGAATGGCTCTTCCGATGATAACAAATCGGATTCAGCTTCAAAAGGGGGCAGCCCTCGGTCGTCACCGTCCGATTCTCATTCTTCTCCATCTCGGTCTTCGTCCCCAGGAGATGCATTGCCTTCGTCGGAAGGAAAATCGTCGTCGAGAGCAAGACAACAAGCAAAGGACGGTGACGATTCACCGTCGCCGTCGGATATCAACCCAGGGATTATAATTGGGGTGGCGGTGGGGGTGGCGGTATTCATAATTGTTCTCATATCAATAATTGCAGTGTGTTCGAAGAAGAAGAAGCGGAAGGGAGATCATATGCAATATTATGGAGATCATGGACCTAATAAAGGTGGAGGTGGTGACTATTACAATAGTGCACAACAACAAAATTGGCACAACAACGGCATGCACGGTCCCGGGACGGACCAATTCGGGAGGCCACCGCCATCGGGCTCCCCGGGCGGGTGGCCGATGAGTGGCGACAACATGACGACGGGCAGCACCTACACAGGCCCTCCTCTTCCTCCACCATCACCATCGATTGCGTTTGGGTTCAACAAGAGCACGTTCACGTACGACGAGCTTGCGGCAGCAACGAGCGGGTTCGCGCACGGGAACCTTCTCGGGCAGGGCGGGTTCGGGTACGTGCACAAGGGAGTGTTGCCGAACGGAAAGGAGGTGGCCGTGAAGAGCCTGAAGGCGGGCAGCGGGCAGGGGGAGAGGGAGTTCATGGCTGAGGTTGAGATTATTAGCAGAGTCCACCACCGGCATTTGGTGTCCTTGGTTGGCTTTTGCATTTCCGGTGGACAAAGAATGTTGGTCTATGAGTTTGTCCCTAACAACACCTTGGAGCATCACCTTCATGGGAAAGGTGTTCGAGCAATGGATTGGGCATTCAGACTTCGTATTGCTATAGGTTCTGCCAAGGGTCTTGCTTACCTTCATGAGGATTGTCATCCAAAGATTATTCATCGAGATATCAAGACTGCTAATATTCTAATTGATACCAATTTTGAAGCAATGGTGGCAGATTTTGGATTAGCTAAGCTATCTACAGATAATCACACACATGTCTCCACCAGAGTCATGGGTACATTTGGGTATTTGGCACCAGAATATGCATCAAGCGGGAAATTGACAGAAAAGTCCGACGTGTTCTCATTTGGTGTAATGTTGTTGGAACTCATCACTGGAAAACGACCTGTCGATCCTACTAATGTCATGGAAGATAGCTTAGTCGATTGGGCTCGACCACTTATGTCTCGAGCCTTGGGAGAAGGCATCTATGAAGAGTTGGTGGATATACGGTTAGAAAATGAGTTCAACACTCCGGAGATGGCTCGCATGGTGGCTTGTGCTGCTGCTTCCATCCGTCATTCGGCTAGAAAACGCCCCAAAATGAGTCAGGTAGTACGAGCTTTAGAAGGGGATGTATCATTGGATGATCTAAACGAAGGGATAAGGCCAGGACAAAGCTCAATTTACAATGTTGGCACCACCTCCGAATATGATTCAAATGCGTACCAAGCCGACATGTCAAAATTCAGGAAAATAGCTTTGTCAGATGATAGCAGTGAGCTTGCAACTTCTAGCAATGACTCGAGAGAGATGAACCATCCGGTCGGGACCCAAAGGCCGCCGCTCTTGTGA 1872 50.53 MGSIFDETIAPGSDSLSPPSDSLPSSSPDSSSSSPPAPPSADADADRSPPPSPPKDDSSSESSSRPSGSPSPKSSRSNGSSDDNKSDSASKGGSPRSSPSDSHSSPSRSSSPGDALPSSEGKSSSRARQQAKDGDDSPSPSDINPGIIIGVAVGVAVFIIVLISIIAVCSKKKKRKGDHMQYYGDHGPNKGGGGDYYNSAQQQNWHNNGMHGPGTDQFGRPPPSGSPGGWPMSGDNMTTGSTYTGPPLPPPSPSIAFGFNKSTFTYDELAAATSGFAHGNLLGQGGFGYVHKGVLPNGKEVAVKSLKAGSGQGEREFMAEVEIISRVHHRHLVSLVGFCISGGQRMLVYEFVPNNTLEHHLHGKGVRAMDWAFRLRIAIGSAKGLAYLHEDCHPKIIHRDIKTANILIDTNFEAMVADFGLAKLSTDNHTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGKRPVDPTNVMEDSLVDWARPLMSRALGEGIYEELVDIRLENEFNTPEMARMVACAAASIRHSARKRPKMSQVVRALEGDVSLDDLNEGIRPGQSSIYNVGTTSEYDSNAYQADMSKFRKIALSDDSSELATSSNDSREMNHPVGTQRPPLL 623
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 7855223 7861488 - Hsped.07g06750.1 Hepe07g0675 574070
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g0675 623 FunFam Proline-rich receptor-like protein kinase PERK1 352 559 - -
Hepe07g0675 623 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 114 592 IPR047117 -
Hepe07g0675 623 MobiDBLite consensus disorder prediction 1 142 - -
Hepe07g0675 623 CDD STKc_IRAK 282 550 - -
Hepe07g0675 623 SUPERFAMILY Protein kinase-like (PK-like) 250 548 IPR011009 -
Hepe07g0675 623 SMART serkin_6 276 548 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g0675 623 ProSitePatterns Serine/Threonine protein kinases active-site signature. 396 408 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe07g0675 623 MobiDBLite consensus disorder prediction 596 623 - -
Hepe07g0675 623 MobiDBLite consensus disorder prediction 597 613 - -
Hepe07g0675 623 Gene3D Transferase(Phosphotransferase) domain 1 352 559 - -
Hepe07g0675 623 ProSitePatterns Protein kinases ATP-binding region signature. 282 304 IPR017441 GO:0005524(InterPro)
Hepe07g0675 623 FunFam proline-rich receptor-like protein kinase PERK1 254 351 - -
Hepe07g0675 623 Pfam Protein tyrosine and serine/threonine kinase 280 494 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe07g0675 623 MobiDBLite consensus disorder prediction 57 125 - -
Hepe07g0675 623 MobiDBLite consensus disorder prediction 13 30 - -
Hepe07g0675 623 Gene3D Phosphorylase Kinase; domain 1 252 351 - -
Hepe07g0675 623 MobiDBLite consensus disorder prediction 42 56 - -
Hepe07g0675 623 MobiDBLite consensus disorder prediction 210 250 - -
Hepe07g0675 623 ProSiteProfiles Protein kinase domain profile. 276 554 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe07g0675 Hepe-Chr7:7855223 Hepe08g1024 Hepe-Chr8:9837175 9.33e-189 dispersed
Hepe04g1490 Hepe-Chr4:70535241 Hepe07g0675 Hepe-Chr7:7855223 5.21e-19 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72926 PF07714 PK_Tyr_Ser-Thr 3.00E-46 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g0675 - - - 0.0