Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g0684 ATGAGAGTTCCTGTTGTTTCCAATCACCAATCTTCTTCTTCTCCAAATTCAAATCCCAAACTCAATTCCTCTCCTTCAACCATCTCCTTCCATACAACCCCTACCACCACCACCACCACCGTCACCGCCACCGCCACCAATCATATTCCCAACACCTGTTACGAACCCACCTCCGTCCTCGACCTCCGCCGCAGTCCCAGCCCCGTGGCGCCCCCCACCGATGACCGTCACAATAATCCTCCTCCTCTCGATTGGGATGAACAAACCCTCCAAAATCTCGATTGGGATTCGATCATGGGCGATTTGGGATTACATGATGACTCCAAGAACACCAATCCCAATCCCAATCCCAACAACAACCATAATCATCACTTCTCTGATTTCCTCCACCACTCTCAGCCTTTTGATCATCAATCCCACCTCGTTTCCTCTGATTTCCTCCTCTCCGATCATCCCTATTCCAATTCCTTCGATTTGGGCCCAAATTCCAACAATCTAGCCTTCGAATTCGTCGAAGATATCGTCCGCGCTGCCGATTGCTTCGATTCCAACGATTTCCAACTCGCTCATGTGATATTGGAGCGGCTCAATCAACGCCTTCAATCCTCCACCGGAAAGCCCCTGCAACGCGCCGCCTTCTTCTTCAAGGAAGCTCTTCAATCTCTCCTCTCCGGTTCAAATCGGGCTAATCGCCTTTCCTCCTGGCCGGAAATCGTTCATACCATTAGAGCTTACAAGGCCTTCTCTGCAATTTCTCCGATTCCGATGTTCTCTCACTTCACTACCAATCAGGCGCTTCTCGAAGCTCTCAACGGTTCGTCATTCATTCATGTCATTGATTTCGATATTGGATTTGGTGGGCAGTACGCTTCGTTTATGAAGGAGATTGCGGAGAAGGCAGAGTCGAGAAAGATGATTCCGCCGGTGATGAGGATTACGGCCGTCGTGCCGGAGGAATTTGCGGTTGAGAGTAGGTTGATTAGGGAGAATCTGTGTCAGTTTGCTCAGGATCTGAAGATTCGGTTCCATATAGATCTGGTGCCGCTGAGGACTTTCGAGACGTTGTCGTTCAAATCGGTGAAGTTCATGGAAGGGGAGAAGGCGGCGATTCTCTTGACTCCGGCGATCTTCCGCCGTCTCGGGAGTATAAACACTATAGGATCTTTTCTCGCCGACGTGCGGCGGGTGTCGCCGTGCGTCGTCGTGTTCGTCGACGGCGAAGGGTGGTCGGACTCCGGCGCGGCGTCGTTCAAGAGGAACTTGGTGGATAGCCTGGAGTTTTACGCCATGATGCTGGAGTCGCTGGACGCGGCGGTGGCCGGCGGAGAGTGGGTGAGGAGGATTGAGACGTTTGTGCTCAGGCCGAAGATACTGGCGGCGGTGGAAGGGGCTGGAAGAATGGCGGCGCCGCCGTGGAGGGAGGTGTTCCACGGGGCCGGGATGAGGCCGGTGGCGCTCAGCCAGTTTGCGGATTTTCAGGCGGAGTGCTTACTTGGCAAAGTACAGGTTCGAGGGTTCCAAGTAGGCAAACGACATGCTGAGCTGGTGCTGTGCTGGCACGAGAGGCCTCTGGTTGCCACGTCCGCGTGGAGGTGTTAA 1599 53.66 MRVPVVSNHQSSSSPNSNPKLNSSPSTISFHTTPTTTTTTVTATATNHIPNTCYEPTSVLDLRRSPSPVAPPTDDRHNNPPPLDWDEQTLQNLDWDSIMGDLGLHDDSKNTNPNPNPNNNHNHHFSDFLHHSQPFDHQSHLVSSDFLLSDHPYSNSFDLGPNSNNLAFEFVEDIVRAADCFDSNDFQLAHVILERLNQRLQSSTGKPLQRAAFFFKEALQSLLSGSNRANRLSSWPEIVHTIRAYKAFSAISPIPMFSHFTTNQALLEALNGSSFIHVIDFDIGFGGQYASFMKEIAEKAESRKMIPPVMRITAVVPEEFAVESRLIRENLCQFAQDLKIRFHIDLVPLRTFETLSFKSVKFMEGEKAAILLTPAIFRRLGSINTIGSFLADVRRVSPCVVVFVDGEGWSDSGAASFKRNLVDSLEFYAMMLESLDAAVAGGEWVRRIETFVLRPKILAAVEGAGRMAAPPWREVFHGAGMRPVALSQFADFQAECLLGKVQVRGFQVGKRHAELVLCWHERPLVATSAWRC 532
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 8018653 8020421 + Hsped.07g06840.1 Hepe07g0684 574079
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g0684 532 MobiDBLite consensus disorder prediction 1 36 - -
Hepe07g0684 532 ProSiteProfiles GRAS family profile. 161 531 IPR005202 -
Hepe07g0684 532 MobiDBLite consensus disorder prediction 101 129 - -
Hepe07g0684 532 MobiDBLite consensus disorder prediction 49 87 - -
Hepe07g0684 532 Pfam GRAS domain family 171 531 IPR005202 -
Hepe07g0684 532 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 139 530 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0043565(PANTHER)
Hepe07g0684 532 MobiDBLite consensus disorder prediction 107 123 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g0643 Hepe-Chr3:13525600 Hepe07g0684 Hepe-Chr7:8018653 4.67e-67 transposed
Hepe06g1136 Hepe-Chr6:60381166 Hepe07g0684 Hepe-Chr7:8018653 4.84e-70 transposed
Hepe04g1503 Hepe-Chr4:70630850 Hepe07g0684 Hepe-Chr7:8018653 2.25e-19 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
55927 PF03514 GRAS 1.50E-89 CL0063 Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g0684 K27747 - csv:116401665 758.829