Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe07g0688 | ATGGAATGTCTTGACGCCGCTCTCAAACCCTGTTTCCGCAACGATATCTCTCTCCAACCACAGCTTTCTGTTCATGATAATGCCTCTGATGACTTTTTCGTCGACCAACTCCTTGATTTGTCTAACCACGACGAATTTGTTCAACCGGATCATTTCCCCGACCACGATAACCCTTCTCTTTCTCTTTCTGTTTCCGGTCACCAATTTCATCACACCTCCTTCGTTTCTGATCTTCCTTCTTTGCCTTCCACCGAACTTACCGTTCCGGCAGAGGATTTGGCAGACCTCGAATGGCTGTCCCATTTCGTTGAGGATTCTTTCTCTGGATTCTCCGCTTCGTTTCCCTCTGCCGCCGCCGTGGACCACCAACCGGAGAACGGTGGTTCTCTCTCGCCGCTGAAGCCCTGTTTCAAAACCCCCGTTCCGGTGAAGGCTCGAAGCAAGAGGACCAGAACCGGCGGCAGAGTTTGGTGCCTCGCTTCATCGTCGTTGACCGAGTCATCCTCCAGTTCAACGACGTCGTCCTCCTCCTCGTCCCCCACGAGTCCTTGGTTCTTCATCTCCGAACGCTTCGAACCGGAAGTTCCGGTCTCGAAGAAACGGAGGAGAAAGTCGCCGGCGGAAAAGTTCAGAGTCGCCTTCGGAGCACAGGCGCCGCGCCGGTGTAGCCATTGCGGAGTCCAGAAAACCCCTCAGTGGAGAACCGGCCCCCTCGGAGCAAAAACTCTCTGCAACGCTTGTGGCGTTAGGTTCAAATCGGGTCGGCTTTTACCCGAATACCGACCCGCCTGCAGCCCGACTTTCTCCAGCGAATTGCACTCCAACCACCACCGGAAAGTCCTGGAGATGCGCCGGACCAAGGAAACCGCCGCACCGGCCGAGTTTTTGACATCAGAAAACAAATAG | 906 | 54.75 | MECLDAALKPCFRNDISLQPQLSVHDNASDDFFVDQLLDLSNHDEFVQPDHFPDHDNPSLSLSVSGHQFHHTSFVSDLPSLPSTELTVPAEDLADLEWLSHFVEDSFSGFSASFPSAAAVDHQPENGGSLSPLKPCFKTPVPVKARSKRTRTGGRVWCLASSSLTESSSSSTTSSSSSSPTSPWFFISERFEPEVPVSKKRRRKSPAEKFRVAFGAQAPRRCSHCGVQKTPQWRTGPLGAKTLCNACGVRFKSGRLLPEYRPACSPTFSSELHSNHHRKVLEMRRTKETAAPAEFLTSENK | 301 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 8121845 | 8122842 | - | Hsped.07g06880.1 | Hepe07g0688 | 574083 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe07g0688 | 301 | CDD | ZnF_GATA | 221 | 269 | IPR000679 | GO:0006355(InterPro)|GO:0043565(InterPro) | |
Hepe07g0688 | 301 | ProSitePatterns | GATA-type zinc finger domain. | 222 | 247 | IPR000679 | GO:0006355(InterPro)|GO:0043565(InterPro) | |
Hepe07g0688 | 301 | Pfam | GATA zinc finger | 222 | 256 | IPR000679 | GO:0006355(InterPro)|GO:0043565(InterPro) | |
Hepe07g0688 | 301 | Gene3D | - | 215 | 289 | IPR013088 | GO:0006355(InterPro)|GO:0008270(InterPro) | |
Hepe07g0688 | 301 | FunFam | GATA transcription factor | 213 | 297 | - | - | |
Hepe07g0688 | 301 | SUPERFAMILY | Glucocorticoid receptor-like (DNA-binding domain) | 215 | 278 | - | - | |
Hepe07g0688 | 301 | PANTHER | GATA TRANSCRIPTION FACTOR | 31 | 288 | IPR051140 | GO:0005634(PANTHER)|GO:0030154(PANTHER) | |
Hepe07g0688 | 301 | SMART | GATA_3 | 216 | 270 | IPR000679 | GO:0006355(InterPro)|GO:0043565(InterPro) | |
Hepe07g0688 | 301 | ProSiteProfiles | GATA-type zinc finger domain profile. | 216 | 252 | IPR000679 | GO:0006355(InterPro)|GO:0043565(InterPro) | |
Hepe07g0688 | 301 | PIRSF | Txn_fac_GATA_plant | 15 | 301 | IPR016679 | GO:0003677(InterPro)|GO:0005634(InterPro)|GO:0045893(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe07g0688 | Hepe-Chr7:8121845 | Hepe08g0974 | Hepe-Chr8:9152296 | 5.29e-56 | dispersed | |
Hepe04g1516 | Hepe-Chr4:70712151 | Hepe07g0688 | Hepe-Chr7:8121845 | 1.72e-08 | wgd | |
Hepe04g1570 | Hepe-Chr4:71201897 | Hepe07g0688 | Hepe-Chr7:8121845 | 5.35e-52 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
55929 | PF00320 | GATA | 3.70E-16 | CL0167 | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe07g0688 | - | - | - | 0.0 |