Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hepe07g0689 | ATGGATTTGGATATGCAAAATTTTCGTATTATTTCACCGTTTCTGTTCTTCATCGTCGTCCCCGTAGTGCTCTTTTTCTTCACTTCAGTTTTCCGGCGGCCGCGCCTTCCACTCCCTCCGGGGCCTAAAGGCCTACCCCTCATCGGCAATATGTTCATGTTAGACCAACTCACCCACCGTGGACTCACTGCCATGGCCAAACGTTACGGCGGAATCTTCCACCTCCGCATCGGTTTCCTCCACATGATCACCGTTTCCGACCCCGACGTTGTTCGGACCGTTCTTCAGATTCAGGACATTGTCTTCTCAAATCGTCCAGCAACCAAAGCAATTAGCTACTTGACTTACGATCGAGCCGACATGGCCTTCGCTCACTACGGCCCTTTTTGGCGGCAAATACGCAAGCTTTGCGTCATGAAACTATTCAGCCGCAAGCATGCTGAGTCATGGGCATCGGTGAGAGACGAGGTTGATAATCTTGTTCGAACAATTGCCACGAGCACTGGAACTGCCTTGAACATCGGTGAGTTGGTATTCACAATGACAATGAATATTATTTACAGAGCAGCGTTCGGGACGATTGAACGAGAAGGCCAAAGCGAATTCATCAAAATACTTCAAGAATTCTCAAAGCTTTTCGGAGCTTTCAATATTGCGGATTTTATTCCTTGTCTTGGTTGGATTGATCCTCAAGGATTCGCTGGTAGACTTGTCGAAGCTCGTCGGTCGCTTGACCGATTCATCGATAGAATCATCGACGAGCACTTGCAGACGAAGAAGAAAATGACTGCTAGTTTGGATGAAGTTGACACTGACATGGTTGACGAGTTACTAGCATTCTATGGTGAAGAAGTGGGAGAAACTGAAAGCGCCATTAAACTCACTAGGGACAATATCAAAGCCATCATCATGGACGTGATGTTCGGCGGCACAGAAACAGTGGCCTCCGCCATAGAATGGGCCATGTCGGAGCTCATGAAGAACCCCGACGACCTCAACAAGCTCCAACAAGAACTTGCCGCCGCCGTCGGCCTTCACCGGCGGCCACAAGAATCCGACTTCGAGAACCTAACATTCCTGAAATGCGCTCTCAAGGAAACTCTCCGGCTCCATCCGCCGATCCCGCTGCTCCTCCACGAGACAGCGGCGGACTCTGAAGTCGCCGGCTACCGGATTCCGGCGAAGTCCCGAGTCATGATCAACGCGTGGGCCATCGGGCGGGACGAGAAGTCGTGGGTGGAACCCAACAGTTTCCGGCCGGCGAGGTTTGAGAGCGACGGCGCCGCGGACTTCAAAGGCGGGAACTTTGAGTTCATACCGTTCGGGTCGGGTCGCCGGTCTTGCCCCGGAATGCAGCTGGGGCTTTACGCGGTTGAGATGGCGGTGGCGAACTTGGTGCATTGTTTCCGGTGGGAGTTACCGGAGGGGATGAAGCCGGACGAGTTAGATATGAATGACGTTTTTGGACTCACTGCGCCGAGAGCGAGTCGACTCGTCGCTGTTCCGTACAACAGACTTGTTTGTTCTTTGGACTGA | 1536 | 52.15 | MDLDMQNFRIISPFLFFIVVPVVLFFFTSVFRRPRLPLPPGPKGLPLIGNMFMLDQLTHRGLTAMAKRYGGIFHLRIGFLHMITVSDPDVVRTVLQIQDIVFSNRPATKAISYLTYDRADMAFAHYGPFWRQIRKLCVMKLFSRKHAESWASVRDEVDNLVRTIATSTGTALNIGELVFTMTMNIIYRAAFGTIEREGQSEFIKILQEFSKLFGAFNIADFIPCLGWIDPQGFAGRLVEARRSLDRFIDRIIDEHLQTKKKMTASLDEVDTDMVDELLAFYGEEVGETESAIKLTRDNIKAIIMDVMFGGTETVASAIEWAMSELMKNPDDLNKLQQELAAAVGLHRRPQESDFENLTFLKCALKETLRLHPPIPLLLHETAADSEVAGYRIPAKSRVMINAWAIGRDEKSWVEPNSFRPARFESDGAADFKGGNFEFIPFGSGRRSCPGMQLGLYAVEMAVANLVHCFRWELPEGMKPDELDMNDVFGLTAPRASRLVAVPYNRLVCSLD | 511 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 8143809 | 8151269 | + | Hsped.07g06890.1 | Hepe07g0689 | 574084 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hepe07g0689 | 511 | Pfam | Cytochrome P450 | 39 | 494 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe07g0689 | 511 | CDD | CYP71-like | 68 | 498 | - | - | |
| Hepe07g0689 | 511 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 441 | 450 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Hepe07g0689 | 511 | PRINTS | E-class P450 group I signature | 318 | 344 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe07g0689 | 511 | PRINTS | E-class P450 group I signature | 66 | 85 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe07g0689 | 511 | PRINTS | E-class P450 group I signature | 90 | 111 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe07g0689 | 511 | PRINTS | E-class P450 group I signature | 438 | 448 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe07g0689 | 511 | PRINTS | E-class P450 group I signature | 298 | 315 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe07g0689 | 511 | PRINTS | E-class P450 group I signature | 448 | 471 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe07g0689 | 511 | PRINTS | E-class P450 group I signature | 361 | 379 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe07g0689 | 511 | PRINTS | E-class P450 group I signature | 401 | 425 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe07g0689 | 511 | FunFam | Cytochrome P450 84A1 | 31 | 504 | - | - | |
| Hepe07g0689 | 511 | PRINTS | P450 superfamily signature | 309 | 326 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe07g0689 | 511 | PRINTS | P450 superfamily signature | 439 | 448 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe07g0689 | 511 | PRINTS | P450 superfamily signature | 362 | 373 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe07g0689 | 511 | Gene3D | Cytochrome P450 | 30 | 502 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe07g0689 | 511 | PANTHER | CYTOCHROME P450 84A1-RELATED | 14 | 510 | IPR053062 | GO:0004497(PANTHER) | |
| Hepe07g0689 | 511 | SUPERFAMILY | Cytochrome P450 | 31 | 505 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Hepe04g1572 | Hepe-Chr4:71225773 | Hepe07g0689 | Hepe-Chr7:8143809 | 1.71e-262 | dispersed | |
| Hepe07g0689 | Hepe-Chr7:8143809 | Hepe08g1660 | Hepe-Chr8:25619409 | 1.02e-115 | dispersed | |
| Hepe07g0689 | Hepe-Chr7:8143809 | Hepe04g1476 | Hepe-Chr4:70341741 | 3.02e-120 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hepe07g0689 | K09755 | - | mdm:103400991 | 743.806 |