Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g0694 ATGGCCGGTTTTTTCCCACTAGGCGGCAGCAGCGGCGGAAGAGGATCCAATTATCACCTTCCCACCACCGGAGGCGGCGGCGAAATTATCCATCCCACCGACGGATTATTTTGGTATAAAAATTATGATAGCTTTGAAATATGGCAGCAACAGCAACAGCAGCAGCAAGGGGGAGAAGGGTTTGTTTACTCCGGCGATGAATCGCCGTCGAGATCGTCGTTGGTGATGGTGAGATCCGGCAGAGGTGGCGGAGGCGGCGGAGGGCAAGTAATAAGCTGTCAAGACTGTGGAAATCAAGCCAAAAAAGATTGCCTTCACATGCGTTGTAGAACTTGCTGCAAAAGCCGTGGCTTTGACTGTGAAACCCACGTCAAAAGCACTTGGATTCCGGCAACCAAACGCCGTGAGCGGCAGCTCCGTAGCGACGACACTAACTCCAAACGCCCTCGAGACAACAACCCCGCTTCTCCAGGGTTGGAAATGGGGAATTTTCCGGCGGAAGTGAGCTCAACGGCGGTGTTTCGGTGTGTACGAATGACAACGTTGGACGAAACCAACGAGCAATATGCTTATCAAACAGCTGTCAACATCGGTGGCCATATCTTCAAGGGCATTCTTTACGACCAAGGCCCAGCTGAACAACAACAACAACAACCACAACCACCACCCATCACCGCCGAATCGCCGCCCATCAGCGCCGCATTGCTAGATCCTCCCCCGCCGTACCCACCTCCTCTCACCACCTACATCTCCGCCGGTACGCAATTTTTTCTTCCTCCAACATCTTAA 789 52.98 MAGFFPLGGSSGGRGSNYHLPTTGGGGEIIHPTDGLFWYKNYDSFEIWQQQQQQQQGGEGFVYSGDESPSRSSLVMVRSGRGGGGGGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWIPATKRRERQLRSDDTNSKRPRDNNPASPGLEMGNFPAEVSSTAVFRCVRMTTLDETNEQYAYQTAVNIGGHIFKGILYDQGPAEQQQQQPQPPPITAESPPISAALLDPPPPYPPPLTTYISAGTQFFLPPTS 262
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 8284447 8285437 + Hsped.07g06940.1 Hepe07g0694 574089
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g0694 262 MobiDBLite consensus disorder prediction 211 245 - -
Hepe07g0694 262 MobiDBLite consensus disorder prediction 131 164 - -
Hepe07g0694 262 MobiDBLite consensus disorder prediction 131 149 - -
Hepe07g0694 262 NCBIfam putative zinc finger domain, LRP1 type 92 134 IPR006510 -
Hepe07g0694 262 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 1 256 IPR007818 GO:0003677(PANTHER)|GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0006355(InterPro)|GO:0045893(PANTHER)
Hepe07g0694 262 MobiDBLite consensus disorder prediction 216 245 - -
Hepe07g0694 262 Pfam Domain of unknown function (DUF702) 91 212 - -
Hepe07g0694 262 NCBIfam LRP1 C-terminal domain 164 211 IPR006511 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe07g0694 Hepe-Chr7:8284447 Hepe10g0123 Hepe-Chr10:1239227 9.48e-44 dispersed
Hepe01g1646 Hepe-Chr1:81667132 Hepe07g0694 Hepe-Chr7:8284447 3.00e-51 wgd
Hepe04g1564 Hepe-Chr4:71167132 Hepe07g0694 Hepe-Chr7:8284447 1.23e-58 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
55931 PF05142 DUF702 2.10E-52 No_clan Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g0694 K27807 - csv:101216097 369.007