Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g0701 ATGGCTCGATCTCGAACCTCCCTCTTTGTTTTTGTTCTTCTTGCCTTGGCTTCGGTTTGTTTCTCTCACAAGATTGGCGGCGGCTACGGTGGTGGTGGCGGTGGCGGTGGCGGTGGCGGTGGCAATGTCGGTTATTTGTATCCTCAGTTCTATGATCATTCTTGTCCGAGAGCTCAAGAAATAGTGAAGTCCATTGTGGCTAAGGCTTTTTATAAGGAAGCTCGTATGGCTGCTTCTTTGATTAGGCTTCATTTTCATGATTGTTTTGTTAAGGGCTGTGATGGTTCACTGTTGTTAGATAGCAGTGGGAAAATAGCTAGTGAGAAAAGGTCCAATCCAAACAGGAACTCTGCTAGAGGCTTTGAAGTCATTGATGAGATCAAATCTGCCTTGGAAAAGGAGTGTCCCCAAACTGTTTCTTGTTCTGATATCTTGGCCATCGCTGCACGAGACTCCACCGTCATAACGGGTGGACCGGGTTGGGAGGTTCCACTTGGAAGAAGGGATTCAAGAGGAGCAAGTATAAGTGGCTCTAACAATGACATTCCTGCTCCAAACAACACATTCCAAACCATTCTCACCAAGTTCAAGAGACAAGGCCTTGACATTGTTGATCTTGTTGCTCTTTCTGGAAGCCACACCATCGGAAACTCTCGATGCACGAGCTTCAGGCAACGGCTGTACAACCAATCTGGCAATGCCCAGCCCGACCCTACTCTCGACCCATCGTACGCGGCCCAATTGCGCAACCGGTGCCCGAGATCAGGGGGTGATCAGAACCTCTTTTTCCTGGACTTCGTCAGCCCGACGAGGTTCGACAACTACTACTTCAAGAACCTTTTGGCTGCAAAGGGCCTGCTGAACTCGGATCAAATTCTCTTGACAAAGAACCAGCAATCGGCAGAGTTGGTGAAGACATATGCAGAGAATTCAGAGCTGTTTTTTGAGCAATTTGCAAAGTCCATGGTTAAGATGGGGAACATTTCTCCTCTCACTGGTTCAAGGGGTGAGATCAGAAAACACTGCAGGAAAGTTAACAAAAATTAG 1047 47.66 MARSRTSLFVFVLLALASVCFSHKIGGGYGGGGGGGGGGGGNVGYLYPQFYDHSCPRAQEIVKSIVAKAFYKEARMAASLIRLHFHDCFVKGCDGSLLLDSSGKIASEKRSNPNRNSARGFEVIDEIKSALEKECPQTVSCSDILAIAARDSTVITGGPGWEVPLGRRDSRGASISGSNNDIPAPNNTFQTILTKFKRQGLDIVDLVALSGSHTIGNSRCTSFRQRLYNQSGNAQPDPTLDPSYAAQLRNRCPRSGGDQNLFFLDFVSPTRFDNYYFKNLLAAKGLLNSDQILLTKNQQSAELVKTYAENSELFFEQFAKSMVKMGNISPLTGSRGEIRKHCRKVNKN 348
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 8393147 8395016 - Hsped.07g07010.1 Hepe07g0701 574096
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g0701 348 FunFam Peroxidase 49 191 - -
Hepe07g0701 348 MobiDBLite consensus disorder prediction 160 181 - -
Hepe07g0701 348 ProSiteProfiles Plant heme peroxidase family profile. 45 346 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe07g0701 348 ProSitePatterns Peroxidases proximal heme-ligand signature. 205 215 IPR019793 -
Hepe07g0701 348 Gene3D Peroxidase, domain 2 183 326 - -
Hepe07g0701 348 Pfam Peroxidase 62 310 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe07g0701 348 SUPERFAMILY Heme-dependent peroxidases 46 346 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe07g0701 348 PANTHER PEROXIDASE 72-RELATED 10 345 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe07g0701 348 PRINTS Haem peroxidase superfamily signature 157 169 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe07g0701 348 PRINTS Haem peroxidase superfamily signature 139 156 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe07g0701 348 PRINTS Haem peroxidase superfamily signature 265 280 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe07g0701 348 PRINTS Haem peroxidase superfamily signature 77 91 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe07g0701 348 PRINTS Haem peroxidase superfamily signature 205 220 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe07g0701 348 PRINTS Plant peroxidase signature 157 172 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe07g0701 348 PRINTS Plant peroxidase signature 55 74 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe07g0701 348 PRINTS Plant peroxidase signature 79 99 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe07g0701 348 PRINTS Plant peroxidase signature 263 278 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe07g0701 348 PRINTS Plant peroxidase signature 119 132 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe07g0701 348 PRINTS Plant peroxidase signature 204 216 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe07g0701 348 PRINTS Plant peroxidase signature 138 148 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe07g0701 348 PRINTS Plant peroxidase signature 279 296 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe07g0701 348 PRINTS Plant peroxidase signature 320 333 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe07g0701 348 Gene3D - 50 346 - -
Hepe07g0701 348 FunFam Peroxidase 183 325 - -
Hepe07g0701 348 ProSitePatterns Peroxidases active site signature. 77 88 IPR019794 GO:0004601(InterPro)
Hepe07g0701 348 CDD secretory_peroxidase 46 345 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe05g0248 Hepe-Chr5:2926138 Hepe07g0701 Hepe-Chr7:8393147 1.64e-57 dispersed
Hepe07g0630 Hepe-Chr7:6951986 Hepe07g0701 Hepe-Chr7:8393147 1.88e-82 dispersed
Hepe07g0701 Hepe-Chr7:8393147 Hepe08g0688 Hepe-Chr8:6198786 3.97e-100 dispersed
Hepe10g1419 Hepe-Chr10:50858904 Hepe07g0701 Hepe-Chr7:8393147 7.21e-64 dispersed
Hepe03g0036 Hepe-Chr3:394458 Hepe07g0701 Hepe-Chr7:8393147 5.21e-97 transposed
Hepe06g1744 Hepe-Chr6:68520938 Hepe07g0701 Hepe-Chr7:8393147 2.53e-111 transposed
Hepe04g1554 Hepe-Chr4:71086778 Hepe07g0701 Hepe-Chr7:8393147 7.74e-178 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g0701 K00430 - csv:101223204 594.349