Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe07g0706 | ATGGCTACATTTGTTGAGCCACCGAACGGGATTAGGTCGATGGGGAAGCATTATTACACAATGTGGCAAACTCTGTTTGAAATTGATACTAAGTATGTCCCAATCAAGCCGGTTGGGCGAGGAGCTTATGGCGTGGTGTGTTCTTCGGTTAATCGAGAGACCAACGAGAAAGTGGCGATCAAGAAGATTAATAATGTTTTTGAGAATCGTACCGACGCCATGAGAACTCTGAGGGAATTGAAGCTTTTGAGGCACATAAGGCATGAGAACGTGATTGCTTTGAAGGATGTGATGATGCCGATTCATAGAAGAAGCTTTAAGGATGTTTATTTGGTTTATGAGCTTATGGATACGGATCTTCATCAGATTATCAAATCCTCTCAACCCCTTTCCAGTGATCATTGCAAGTATTTTATCTATCAGTTGCTTTCCGGGTTGCAGTATCTTCATTCAGCAAACATTCTTCACCGGGATTTGAAGCCTGGGAACCTCCTTGTCAATGCTAACTGCGATCTGAAGATCTGTGATTTCGGGTTGGCACGAACGAGGATAGGCCGCGAACAGTTCATGACTGAGTATGTTGTTACTCGTTGGTATCGTGCACCAGAGCTTCTCCTCTGCTGTGACAACTATGGGACTTCCATTGATGTATGGTCTGTGGGATGCATCTTTGCTGAGATTCTGGGTCGGCAACCAATCTTCCCGGGGACGGAGTGCTTCAACCAACTGAACTTAATCATCAACATTCTCGGTAGTCCAAAGGAAGCGGATATCGTGTTCATCGACAATGCAAAGGCCAGGAAGTATATCAAGAGCATGCCCTTTTCAAGAGGAGTACACCTTTCACATCTATATCCAAATGCTGAACCTTTAGCTTTAGACTTGTTGCAGAAGATGCTTGTGTTTGATCCAACTAAGAGAATTACCGTTGACGAAGCTCTTCAACATCCATACATGTCGGGGCTATATGACCCGGAACTCGATACTCCTGTTGAGGTTCCCCTCACTCTCAACATCGACATCGACGAATCACTTGGGGAGCATAAGATCAGGGAAATGATGTTGAATGAGATGCTCTATTACCATCCTGAAGCTGTTTCAGCCTATTCTTGA | 1113 | 44.47 | MATFVEPPNGIRSMGKHYYTMWQTLFEIDTKYVPIKPVGRGAYGVVCSSVNRETNEKVAIKKINNVFENRTDAMRTLRELKLLRHIRHENVIALKDVMMPIHRRSFKDVYLVYELMDTDLHQIIKSSQPLSSDHCKYFIYQLLSGLQYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTRIGREQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRQPIFPGTECFNQLNLIINILGSPKEADIVFIDNAKARKYIKSMPFSRGVHLSHLYPNAEPLALDLLQKMLVFDPTKRITVDEALQHPYMSGLYDPELDTPVEVPLTLNIDIDESLGEHKIREMMLNEMLYYHPEAVSAYS | 370 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 8449842 | 8452301 | - | Hsped.07g07060.1 | Hepe07g0706 | 574101 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe07g0706 | 370 | Pfam | Protein kinase domain | 34 | 319 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe07g0706 | 370 | Gene3D | Transferase(Phosphotransferase) domain 1 | 116 | 347 | - | - | |
Hepe07g0706 | 370 | Gene3D | Phosphorylase Kinase; domain 1 | 19 | 351 | - | - | |
Hepe07g0706 | 370 | FunFam | Mitogen-activated protein kinase | 116 | 347 | - | - | |
Hepe07g0706 | 370 | ProSiteProfiles | Protein kinase domain profile. | 32 | 319 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe07g0706 | 370 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 154 | 166 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Hepe07g0706 | 370 | FunFam | Mitogen-activated protein kinase | 18 | 126 | - | - | |
Hepe07g0706 | 370 | SMART | serkin_6 | 32 | 319 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe07g0706 | 370 | PANTHER | MITOGEN-ACTIVATED PROTEIN KINASE | 26 | 359 | IPR050117 | GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER) | |
Hepe07g0706 | 370 | SUPERFAMILY | Protein kinase-like (PK-like) | 24 | 325 | IPR011009 | - | |
Hepe07g0706 | 370 | ProSitePatterns | MAP kinase signature. | 67 | 170 | IPR003527 | GO:0004707(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe07g0706 | 370 | ProSitePatterns | Protein kinases ATP-binding region signature. | 38 | 62 | IPR017441 | GO:0005524(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe07g0706 | Hepe-Chr7:8449842 | Hepe10g0116 | Hepe-Chr10:1147313 | 1.66e-138 | dispersed | |
Hepe06g0962 | Hepe-Chr6:57264993 | Hepe07g0706 | Hepe-Chr7:8449842 | 1.61e-60 | transposed | |
Hepe10g0613 | Hepe-Chr10:7570656 | Hepe07g0706 | Hepe-Chr7:8449842 | 9.41e-210 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
72927 | PF00069 | Pkinase | 1.80E-71 | CL0016 | Hepe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe07g0706 | K20537 | - | csv:101203896 | 693.73 |