Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g0706 ATGGCTACATTTGTTGAGCCACCGAACGGGATTAGGTCGATGGGGAAGCATTATTACACAATGTGGCAAACTCTGTTTGAAATTGATACTAAGTATGTCCCAATCAAGCCGGTTGGGCGAGGAGCTTATGGCGTGGTGTGTTCTTCGGTTAATCGAGAGACCAACGAGAAAGTGGCGATCAAGAAGATTAATAATGTTTTTGAGAATCGTACCGACGCCATGAGAACTCTGAGGGAATTGAAGCTTTTGAGGCACATAAGGCATGAGAACGTGATTGCTTTGAAGGATGTGATGATGCCGATTCATAGAAGAAGCTTTAAGGATGTTTATTTGGTTTATGAGCTTATGGATACGGATCTTCATCAGATTATCAAATCCTCTCAACCCCTTTCCAGTGATCATTGCAAGTATTTTATCTATCAGTTGCTTTCCGGGTTGCAGTATCTTCATTCAGCAAACATTCTTCACCGGGATTTGAAGCCTGGGAACCTCCTTGTCAATGCTAACTGCGATCTGAAGATCTGTGATTTCGGGTTGGCACGAACGAGGATAGGCCGCGAACAGTTCATGACTGAGTATGTTGTTACTCGTTGGTATCGTGCACCAGAGCTTCTCCTCTGCTGTGACAACTATGGGACTTCCATTGATGTATGGTCTGTGGGATGCATCTTTGCTGAGATTCTGGGTCGGCAACCAATCTTCCCGGGGACGGAGTGCTTCAACCAACTGAACTTAATCATCAACATTCTCGGTAGTCCAAAGGAAGCGGATATCGTGTTCATCGACAATGCAAAGGCCAGGAAGTATATCAAGAGCATGCCCTTTTCAAGAGGAGTACACCTTTCACATCTATATCCAAATGCTGAACCTTTAGCTTTAGACTTGTTGCAGAAGATGCTTGTGTTTGATCCAACTAAGAGAATTACCGTTGACGAAGCTCTTCAACATCCATACATGTCGGGGCTATATGACCCGGAACTCGATACTCCTGTTGAGGTTCCCCTCACTCTCAACATCGACATCGACGAATCACTTGGGGAGCATAAGATCAGGGAAATGATGTTGAATGAGATGCTCTATTACCATCCTGAAGCTGTTTCAGCCTATTCTTGA 1113 44.47 MATFVEPPNGIRSMGKHYYTMWQTLFEIDTKYVPIKPVGRGAYGVVCSSVNRETNEKVAIKKINNVFENRTDAMRTLRELKLLRHIRHENVIALKDVMMPIHRRSFKDVYLVYELMDTDLHQIIKSSQPLSSDHCKYFIYQLLSGLQYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTRIGREQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRQPIFPGTECFNQLNLIINILGSPKEADIVFIDNAKARKYIKSMPFSRGVHLSHLYPNAEPLALDLLQKMLVFDPTKRITVDEALQHPYMSGLYDPELDTPVEVPLTLNIDIDESLGEHKIREMMLNEMLYYHPEAVSAYS 370
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 8449842 8452301 - Hsped.07g07060.1 Hepe07g0706 574101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g0706 370 Pfam Protein kinase domain 34 319 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g0706 370 Gene3D Transferase(Phosphotransferase) domain 1 116 347 - -
Hepe07g0706 370 Gene3D Phosphorylase Kinase; domain 1 19 351 - -
Hepe07g0706 370 FunFam Mitogen-activated protein kinase 116 347 - -
Hepe07g0706 370 ProSiteProfiles Protein kinase domain profile. 32 319 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g0706 370 ProSitePatterns Serine/Threonine protein kinases active-site signature. 154 166 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe07g0706 370 FunFam Mitogen-activated protein kinase 18 126 - -
Hepe07g0706 370 SMART serkin_6 32 319 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g0706 370 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 26 359 IPR050117 GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER)
Hepe07g0706 370 SUPERFAMILY Protein kinase-like (PK-like) 24 325 IPR011009 -
Hepe07g0706 370 ProSitePatterns MAP kinase signature. 67 170 IPR003527 GO:0004707(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g0706 370 ProSitePatterns Protein kinases ATP-binding region signature. 38 62 IPR017441 GO:0005524(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe07g0706 Hepe-Chr7:8449842 Hepe10g0116 Hepe-Chr10:1147313 1.66e-138 dispersed
Hepe06g0962 Hepe-Chr6:57264993 Hepe07g0706 Hepe-Chr7:8449842 1.61e-60 transposed
Hepe10g0613 Hepe-Chr10:7570656 Hepe07g0706 Hepe-Chr7:8449842 9.41e-210 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72927 PF00069 Pkinase 1.80E-71 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g0706 K20537 - csv:101203896 693.73