Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g0738 ATGAGAACACTTTGTGACGCTTGTGAAAGCGCTGCTGCTATCGTTTTTTGCGCTGCTGACGAGGCCGCTCTTTGCCACTCTTGTGACGAGAAGGTTCATATGTGCAATAAACTCGCAAGTCGACATGTAAGAGTTGGCCTTGCAAGTCCCAGTGATGTTCCCCGTTGTGATATATGCGAGAATGCACCTGCTTTCTTTTACTGTGAGATAGATGGAAGTTCCCTTTGTTTGCAATGTGACATGATCGTTCATGTTGGAGGGAAAAGGACACATAAGAGATACCTTTTGCTAAGACAGAGGGTCGAGTTTCCAGGAGACAAACCTAAGAATCTTGATGATCCGTCTCCACATGCCAAGGTTCCTAATGAGATTGGTAAAGGACATAATCAGCCACCGCCGCACAAAGTGACAGTGGAAGACAACCTGCAAAATTATCACCGACTATCACCTGTTCAAGAGGCTAACGATGATGGTCATGGCGAGACTGATACGAAAATGATCGATTTGAATATGAAGCCTCAAAGGGTCCATGGGCAGGCTGCTAATAATCAGGTTCAAATGCTTTTCCCCATCTCTTCCTCCATAGTTTTTAACTGTTCATATACGCTGTGA 612 44.93 MRTLCDACESAAAIVFCAADEAALCHSCDEKVHMCNKLASRHVRVGLASPSDVPRCDICENAPAFFYCEIDGSSLCLQCDMIVHVGGKRTHKRYLLLRQRVEFPGDKPKNLDDPSPHAKVPNEIGKGHNQPPPHKVTVEDNLQNYHRLSPVQEANDDGHGETDTKMIDLNMKPQRVHGQAANNQVQMLFPISSSIVFNCSYTL 203
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 8820933 8824312 - Hsped.07g07380.1 Hepe07g0738 574133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g0738 203 FunFam B-box zinc finger protein 19 2 92 - -
Hepe07g0738 203 Pfam B-box zinc finger 52 92 IPR000315 GO:0008270(InterPro)
Hepe07g0738 203 Pfam B-box zinc finger 3 41 IPR000315 GO:0008270(InterPro)
Hepe07g0738 203 SUPERFAMILY B-box zinc-binding domain 48 88 - -
Hepe07g0738 203 ProSiteProfiles Zinc finger B-box type profile. 51 96 IPR000315 GO:0008270(InterPro)
Hepe07g0738 203 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270(InterPro)
Hepe07g0738 203 CDD Bbox1_BBX-like 56 96 IPR049808 -
Hepe07g0738 203 CDD Bbox1_BBX-like 4 47 IPR049808 -
Hepe07g0738 203 Gene3D Classic Zinc Finger 2 96 - -
Hepe07g0738 203 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 173 IPR051979 GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0009640(PANTHER)
Hepe07g0738 203 SMART bboxneu5 51 96 IPR000315 GO:0008270(InterPro)
Hepe07g0738 203 SMART bboxneu5 1 47 IPR000315 GO:0008270(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe04g1574 Hepe-Chr4:71240552 Hepe07g0738 Hepe-Chr7:8820933 9.13e-67 dispersed
Hepe07g0738 Hepe-Chr7:8820933 Hepe07g0957 Hepe-Chr7:12812874 4.76e-24 dispersed
Hepe07g0738 Hepe-Chr7:8820933 Hepe01g1643 Hepe-Chr1:81637092 1.89e-19 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
55937 PF00643 zf-B_box 2.70E-06 No_clan Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g0738 - - - 0.0