Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hepe07g0751 | ATGGATTTTGGTTCGTCGTCCTCCTCGAGATTTCCCTTCGAGAATCGTCGTCATTTCGAACCGCAGCAGGAGCTGGATCAACAACAACAAGATCAAGAAATTATGGAGTGTAATAATTCCATTTTTGTAGAGAAAGAACACATGTTCGACAAGGTTGTTACTCCAAGTGATGTGGGAAAATTAAACCGTTTAGTGATCCCAAAACAGCATGCTGAAAAGTACTTTCCACTTGATTCCTCCTCCAACGAAAAGGGTCTTCTCTTAAACTTCGAAGATCGGTCTGGAAAATCATGGCGGTTTCGTTACTCTTACTGGACTAGCAGCCAGAGCTATGTCATGACCAAAGGCTGGAGCCGCTTTGTTAAAGAAAAAAGACTGGATGCTGGTGATATTGTCTCCTTTCAAAGAGGGGTTGGAGATGTTGGTAAAGATCGGTTTTTTATCGATTGGCGGCGGCGGCCTCCTCACGCCGCGGTCGAAACAGCTATTAATTTCCACCACCACGGCGGTGGTGGCGGAGGAGGTCAAATTCCTCACCATTTTCAGGTTCACCAGTGGGCTACACCCTTATCTTTACACAGGGACCACGTCCTCCACTTGCCGCAGAATAATAGTAATCATAATAATGTCAGCTTATTTCATAATACGAATAACCCTTATTGGAATAATCATCATTATCCTCATCATCATCATCATCGTCATCATCGTCCTAATCATCCTGTCGTCGGTGGTGGTGGTGGTTCGTATGGTGAGCCGTCGGTTTTTTACCATCTAAGATCCGCTGCAACCGTCACCGCTTCAGAGGTGGTGCCTGTTGCAGCCGGTGCAGGTGGTGGTCATGGGATAATTGGGAAAGGTGCTGCAGCTAAGACATTGAGGCTTTTTGGTGTCGACATGGAATGTGCAGTCTCGGAGGAGTCGGATGATGAATGTGACATAACAACCTCGACTACGACAATGTCGTCGTCGCCTCAATTTCGTATTTACAATGGAATGCCAATGTCGATGCCGATGCCGATGTCGATGTCGATGTCGATGCAGATGCAGATGCAGAATGATAACAACAACGTACCGACCACGGACTTTTTCGAGAAAGGGAAGTCGTCGATGTCATCCTTAGATTTTGGTACCTGA | 1134 | 46.3 | MDFGSSSSSRFPFENRRHFEPQQELDQQQQDQEIMECNNSIFVEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNEKGLLLNFEDRSGKSWRFRYSYWTSSQSYVMTKGWSRFVKEKRLDAGDIVSFQRGVGDVGKDRFFIDWRRRPPHAAVETAINFHHHGGGGGGGQIPHHFQVHQWATPLSLHRDHVLHLPQNNSNHNNVSLFHNTNNPYWNNHHYPHHHHHRHHRPNHPVVGGGGGSYGEPSVFYHLRSAATVTASEVVPVAAGAGGGHGIIGKGAAAKTLRLFGVDMECAVSEESDDECDITTSTTTMSSSPQFRIYNGMPMSMPMPMSMSMSMQMQMQNDNNNVPTTDFFEKGKSSMSSLDFGT | 377 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 9030726 | 9035415 | + | Hsped.07g07510.1 | Hepe07g0751 | 574146 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hepe07g0751 | 377 | SMART | B3_2 | 49 | 154 | IPR003340 | GO:0003677(InterPro) | |
| Hepe07g0751 | 377 | Pfam | B3 DNA binding domain | 49 | 153 | IPR003340 | GO:0003677(InterPro) | |
| Hepe07g0751 | 377 | PANTHER | B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 | 22 | 299 | IPR044800 | GO:0003700(InterPro) | |
| Hepe07g0751 | 377 | ProSiteProfiles | B3 DNA-binding domain profile. | 49 | 154 | IPR003340 | GO:0003677(InterPro) | |
| Hepe07g0751 | 377 | Gene3D | - | 42 | 167 | IPR015300 | - | |
| Hepe07g0751 | 377 | FunFam | B3 domain-containing protein | 42 | 163 | - | - | |
| Hepe07g0751 | 377 | MobiDBLite | consensus disorder prediction | 1 | 29 | - | - | |
| Hepe07g0751 | 377 | SUPERFAMILY | DNA-binding pseudobarrel domain | 46 | 152 | IPR015300 | - | |
| Hepe07g0751 | 377 | CDD | B3_DNA | 47 | 136 | IPR003340 | GO:0003677(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Hepe05g0407 | Hepe-Chr5:5062818 | Hepe07g0751 | Hepe-Chr7:9030726 | 6.81e-48 | dispersed | |
| Hepe06g1411 | Hepe-Chr6:64472738 | Hepe07g0751 | Hepe-Chr7:9030726 | 9.28e-69 | dispersed | |
| Hepe07g0751 | Hepe-Chr7:9030726 | Hepe09g1063 | Hepe-Chr9:11362082 | 3.18e-28 | dispersed | |
| Hepe07g0751 | Hepe-Chr7:9030726 | Hepe01g1220 | Hepe-Chr1:77380913 | 2.94e-45 | transposed |
Transcription factors information
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 55939 | PF02362 | B3 | 1.80E-29 | CL0405 | Hepe | TF |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hepe07g0751 | K09287 | - | csv:101220139 | 369.392 |