Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g0768 ATGGATGGTGACATTAATCAACAAATGGCAACTTCTTCTTCTAGTTCATTATTGATGAATTCTAGTTGTGAAATTGATTGGGTTGGGCTTCTTTGTGATTCTTCTTTAGGTAATTTGGAGATGGAGAAGGCAAGTGGAAGTGAGGTTGCAATTGCAATGGGGGAATATTATGATGTTGGAGAAAAAGAGAGTGATAATGGAGGGAAGAATGTTAACAAAGGTAAAAGAAGTGCTTTGCCAAGGATTGCTTTTCAGACAAGGAGTGCTGAGGATGTTCTTGATGATGGGTTTAGATGGAGGAAATATGGTCAAAAGGCTGTCAAACATACCACCCATCCTAGGAGCTATTACCGGTGTACACATCATACATGCAACGTTAAGAAACAAATTCAAAGGCACTCCAAGGATCCAACCATAGTGGTGACAACATATGAAGGGATTCACAACCATCCATCTGAAAAATTAATGGAAACTCTCAGCCCTCTTCTAAAGCAATTACAGTTCCTTTCTGGCATTTAG 519 39.31 MDGDINQQMATSSSSSLLMNSSCEIDWVGLLCDSSLGNLEMEKASGSEVAIAMGEYYDVGEKESDNGGKNVNKGKRSALPRIAFQTRSAEDVLDDGFRWRKYGQKAVKHTTHPRSYYRCTHHTCNVKKQIQRHSKDPTIVVTTYEGIHNHPSEKLMETLSPLLKQLQFLSGI 172
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 9285090 9288438 + Hsped.07g07680.1 Hepe07g0768 574163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g0768 172 Pfam WRKY DNA -binding domain 94 151 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe07g0768 172 SMART WRKY_cls 93 152 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe07g0768 172 FunFam WRKY transcription factor 57 79 153 - -
Hepe07g0768 172 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 61 151 IPR044810 GO:0003700(InterPro)
Hepe07g0768 172 SUPERFAMILY WRKY DNA-binding domain 86 152 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe07g0768 172 ProSiteProfiles WRKY domain profile. 88 153 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe07g0768 172 Gene3D WRKY domain 78 152 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe05g1187 Hepe-Chr5:57725446 Hepe07g0768 Hepe-Chr7:9285090 1.96e-34 dispersed
Hepe05g1979 Hepe-Chr5:70260427 Hepe07g0768 Hepe-Chr7:9285090 8.61e-48 dispersed
Hepe07g0768 Hepe-Chr7:9285090 Hepe08g0620 Hepe-Chr8:5443619 2.38e-28 dispersed
Hepe07g0767 Hepe-Chr7:9275384 Hepe07g0768 Hepe-Chr7:9285090 3.70e-15 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
55942 PF03106 WRKY 1.50E-24 CL0274 Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g0768 - - - 0.0