Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g0782 ATGGCTTTGAATACTACGGCAGTGACCAAATGTCCATCTCCAATGAAAGCAACATCCAACGGCATTTTCCAGGGCGATAATCCTCTTGATTTTGCTCTCCCTCTTGTCATTCTGCAGATATGTTTGGTAGTCGTACTTACTCGTGGCCTTGCTTTTCTTCTGAAGCCGTTAAAACAGCCACGAGTGATCGGAGAAATTATTGGAGGAATACTTCTTGGTCCATCAGCTCTTGGACGTAACAAGAACTTTCTTCATACGGTATTTCCGTCCAATAGTATCACAGTGTTAGATACCATAGCAAACATTGGATTGTTATTCTTTCTCTTTCTTGTGGGCCTTGAGTTAGATCTAACGTCAATACGTCGTACTGGAAAGAAGGCCCTCGCCATTGCCATTACTGGAATTTCCGTTCCCTTTGCATTAGGAATTGGTTCATCATTTGTCCTCAAAGAAACCATATCCAAAGGTGTAAATGCTTCTGCGTTTCTCATATTCATGGGTGTTGCACTTTCGATAACAGCATTTCCCGTCTTGGCTCGTATTCTTGCCGAGCTTAAACTCCTAACCACGGATATTGGCAGGTTGGCTATGTCTGCTGCAGCAGTGAATGACGTAGCTGCCTGGATTCTCCTTGCTCTTGCCATTGCATTATCTGGTTCTGATAAATCTTCCCTAACTGCGGTTTGGGTCCTTTTATCTGGCTGCGGCTTTGTCGTGGCCGCTATTGTCATTTTATCCCCAGTTTTCAAATGGATGACCAAGCAATGTTTTGAAGGGGAGCCGGTAAGTGAGATCTACATATGCGCCACATTAGCTATCGTCCTAGCTGCTGGATTTGCCACAGACTTTATTGGGATACATGCTATGTTTGGAGCTTTTGTCGTTGGAATATTAGTTCCGAAGGATGGGCCATTAGTAGGTGCTTTGGTAGAGAAAATTGAGGATCTTGTTTCTGGTCTGTTCTTGCCTCTTTACTTTGTATCAAGTGGATTGAAGACTAATGTAGCCACAATTCAAGGAGCACAGTCCTGGGGTCTTCTAGCTTTAGTTATAGTTACTGCCTGTTTCGGAAAAATCGTTGGCACTTTTCTCGTGTCCATTCTTTGTAAAATACCTGTTCGTGAGGCTCTCGCGTTAGGATTTCTAATGAACACAAAAGGTTTGGTGGAGCTTATTGTTCTCAATATTGGAAAAGACAGAAAGGTTCTGAATGACCAGACCTTTGCAATAATGATTCTAATGGCTCTTTTTACTACTTTCATTACCACTCCCCTTGTCATTGCTGTATACAAGCCAGCGAGGAGTGCCAAATTAGCCAATTATAAGCATAGGAAAATCGAACGGAAGAGCAAGAATACACAGCTTAGGATTTTGACCTGTTTCCATAGTGCAGGAAACATTCCATCAACTATAAATCTGCTCGAGGCCTCGAGAGGAATTGGGAAGGACGGAGAACTTTGTGTATATGCAATGCATCTCATGGAGCTGTCCGAGAGGTCCTCAGCCATTTTAATGGTACATAAGGCTAGGAAAAACGGGTTACCTTTCTGGAACAAGGGCCAGAGGTCGGATTCCAACCATGTTATCGTTGCGTTTGAAGCCTACCAACAACTGAGCAGAGTATTCATCCGACCGATGACGGCCATCTCCTCAATGTCTGACATACATGAAGATATCTGCGCTACCGCTGAGAGGAAAAGAGCTGCAATCATAATTCTTCCGTTCCACAAGCACCAGAGGGTGGATGGTTCACTGGAGACTACTCGAAACAACATCCGCATTGTTAATCAGAATGTTCTTAAGCATGCTCCATGTTCGGTTGGAATTTTCATTGATCGTGGATTGGGTGGGACAACCCATGTTCCGTCGAGCAATGTTTCGCTTTTCATCACTGTTCTATTCTTTGGTGGTGGAGATGATCGTGAAGCGCTTTCTTATGGAGTTCGCATGGCCGAGCACCCTGGCATTAGATTGATGGTAATTCGTTTCTTTGTTGAACCCGAGCCTGTTGGGGAGATAGTCCACTCTGATACCGTCAGGAATTCTTCTGCGAAGCCAGTTTCTCAAGATGATGAATTTCTTTCTGAATTCAAGCACAATGTGGGCAAGAATGATTCCATCATATACGTCGAGAAGACCATAAAAAGTGCTGCAGAAGCAATGGATACAGTGCAGGAGCTTAAAAACTGCAACCTGTATCTTGCTGGCCGAAGACCGGATATCAAAGCAACCTCTGCCTTAAACAGAAGCGACTGTCCGGAGCTTGGTCCGGTCGGGAACCTGTTGACTTCACCAAACTTCCCGATTGCGGCGTCGGTTTTGGTCGTGCAGCAATATCATTCCAAGTTACCAGTGAATTTAGCTTCAGATTCTGCTGATGGGGAATCAGAATCAGCATAG 2400 44.33 MALNTTAVTKCPSPMKATSNGIFQGDNPLDFALPLVILQICLVVVLTRGLAFLLKPLKQPRVIGEIIGGILLGPSALGRNKNFLHTVFPSNSITVLDTIANIGLLFFLFLVGLELDLTSIRRTGKKALAIAITGISVPFALGIGSSFVLKETISKGVNASAFLIFMGVALSITAFPVLARILAELKLLTTDIGRLAMSAAAVNDVAAWILLALAIALSGSDKSSLTAVWVLLSGCGFVVAAIVILSPVFKWMTKQCFEGEPVSEIYICATLAIVLAAGFATDFIGIHAMFGAFVVGILVPKDGPLVGALVEKIEDLVSGLFLPLYFVSSGLKTNVATIQGAQSWGLLALVIVTACFGKIVGTFLVSILCKIPVREALALGFLMNTKGLVELIVLNIGKDRKVLNDQTFAIMILMALFTTFITTPLVIAVYKPARSAKLANYKHRKIERKSKNTQLRILTCFHSAGNIPSTINLLEASRGIGKDGELCVYAMHLMELSERSSAILMVHKARKNGLPFWNKGQRSDSNHVIVAFEAYQQLSRVFIRPMTAISSMSDIHEDICATAERKRAAIIILPFHKHQRVDGSLETTRNNIRIVNQNVLKHAPCSVGIFIDRGLGGTTHVPSSNVSLFITVLFFGGGDDREALSYGVRMAEHPGIRLMVIRFFVEPEPVGEIVHSDTVRNSSAKPVSQDDEFLSEFKHNVGKNDSIIYVEKTIKSAAEAMDTVQELKNCNLYLAGRRPDIKATSALNRSDCPELGPVGNLLTSPNFPIAASVLVVQQYHSKLPVNLASDSADGESESA 799
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 9508398 9512282 - Hsped.07g07820.1 Hepe07g0782 574177

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g0782 799 Pfam Sodium/hydrogen exchanger family 47 425 IPR006153 GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro)
Hepe07g0782 799 Gene3D - 35 438 IPR038770 -
Hepe07g0782 799 PANTHER CATION/H + ANTIPORTER 11 784 IPR050794 GO:0006885(PANTHER)|GO:0012505(PANTHER)|GO:0015672(PANTHER)
Hepe07g0782 799 FunFam Cation/H(+) antiporter 15 35 437 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g0782 K26731 - - csv:101223205 1349.34
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe04g0870 Hepe-Chr4:62991912 Hepe07g0782 Hepe-Chr7:9508398 3.82e-258 dispersed
Hepe07g0782 Hepe-Chr7:9508398 Hepe08g1241 Hepe-Chr8:13197270 1.07e-250 dispersed
Hepe07g0782 Hepe-Chr7:9508398 Hepe07g0783 Hepe-Chr7:9531134 1.52e-299 tandem
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Hepe08g1241 . 10 791 Antiporter Super Family AT2G13620 73.9 0.0e+00 1166.0
Hepe04g0870 . 75 803 Antiporter Super Family AT3G53720 68.3 7.8e-278 953.4
Hepe07g0782 . 83 780 Antiporter Super Family AT3G53720 50.4 2.0e-185 646.4
Hepe07g0782 . 1 797 Antiporter Super Family AT5G41610 68.9 1.5e-308 1055.4
Hepe07g0783 . 1 645 Antiporter Super Family AT5G41610 67.5 4.4e-247 851.3
Hepe04g0870 . 8 815 Antiporter Super Family AT5G41610 51.2 1.0e-211 733.8
Hepe07g0782 . 9 796 Antiporter Super Family AT4G23700 62.5 1.8e-280 962.2
Hepe07g0783 . 1 644 Antiporter Super Family AT4G23700 66.0 4.9e-238 821.2
Hepe07g0782 . 4 779 Antiporter Super Family AT3G17630 64.4 3.1e-277 951.4
Hepe07g0783 . 3 644 Antiporter Super Family AT3G17630 63.1 4.1e-221 765.0
Hepe04g0870 . 2 812 Antiporter Super Family AT3G17630 51.3 6.7e-208 721.1
Hepe07g0782 . 5 784 Antiporter Super Family AT1G64170 56.5 5.0e-235 811.2
Hepe07g0783 . 2 644 Antiporter Super Family AT1G64170 55.1 6.2e-185 644.8
Hepe08g1241 . 10 791 Antiporter Super Family AT2G13620 73.9 0.0e+00 1166.0
Hepe07g0782 . 5 784 Antiporter Super Family AT1G64170 56.5 5.0e-235 811.2
Hepe07g0783 . 2 644 Antiporter Super Family AT1G64170 55.1 6.2e-185 644.8
Hepe07g0782 . 9 796 Antiporter Super Family AT4G23700 62.5 1.8e-280 962.2
Hepe07g0783 . 1 644 Antiporter Super Family AT4G23700 66.0 4.9e-238 821.2
Hepe07g0782 . 1 797 Antiporter Super Family AT5G41610 68.9 1.5e-308 1055.4
Hepe07g0783 . 1 645 Antiporter Super Family AT5G41610 67.5 4.4e-247 851.3
Hepe04g0870 . 8 815 Antiporter Super Family AT5G41610 51.2 1.0e-211 733.8
Hepe07g0782 . 4 779 Antiporter Super Family AT3G17630 64.4 3.1e-277 951.4
Hepe07g0783 . 3 644 Antiporter Super Family AT3G17630 63.1 4.1e-221 765.0
Hepe04g0870 . 2 812 Antiporter Super Family AT3G17630 51.3 6.7e-208 721.1
Hepe04g0870 . 75 803 Antiporter Super Family AT3G53720 68.3 7.8e-278 953.4
Hepe07g0782 . 83 780 Antiporter Super Family AT3G53720 50.4 2.0e-185 646.4
Hepe03g1756 . 47 790 Antiporter Super Family AT3G52080 55.2 2.0e-236 815.8
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000528 2 8 3 3 2 4 4 4 4 4 4 4 4 3 3 4 4 5 2 4 4 2 2 3 4 4 2 5 5 5 111