Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g0830 ATGGCTAATCGGGGAGGGGGTTCGTTTTCTCCCCCAAATCTTTCAATTCAAGGTTGGGGAGGAGGAGGAGATGAACTTTACACTGAGCTTTGGAGGGTCTCTGCTGGCCCTCTTGTGGAAGTTCCTCGAGTTAATGATAAGGTTTTCTATTTTCCTCAAGGCCATATGGAACAGTTGGAGGCATCTACAAATAAGGAGCTTAGTCAGAAACTTCCTTCGTTTAATCTTTCCTCCAAAGTACTTTGTCATGTAGTTGATGTTCGCCTGCTGGCAGAGCTGGAAACAGACGAGGTTTATTCACAGATAACTTTAATGCCGGATGGAAATCAAGATGAACCTACAAGTCCTAAACCTTCACCTCTGGCTGGTCGAAAACAGAAAGTCCATTCATTTTGCAAGGTTTTAACTGCTTCTGATACTAGCACCCATGGGGGGTTTTCCGTGCTTCGTAAACATGCCACAGAATGCCTGCCTCCATTGGATATGACCCAGCAGACCCCGACTCAGGAACTCGTTGCCAAAGATCTTCACGGTTACGAGTGGCGATTCAAGCATATTTTTAGGGGTCAACCGCGAAGGCATTTGCTGACGACCGGATGGAGCACCTTTGTTACTTCTAAGAGATTAGTTGCTGGAGACTCTTTTGTGTTCTTGAGGGGGGAAAATGGAGACTTGCGAGTTGGAGTGAGACGTCTTGCTCGCCAACAAAGCAGTATGCCTTCATCTGTGATTTCGAGTCACAGCATGCACTTAGGAGTGCTTGCTACTGCATCTCATGCCGTGTCAACTCAAACTCGCTTTGTTGTCTATTATAAGCCAAGGGCAAGCCAGTTTATCGTGAGCGTGAGTAAGTACATTGAAGCGACGAACAGTAAGTTCTTAGTCGGGATGAGGTTCAAGATGAGGTTTGAGGGAGATGAGTCTCTAGAGAGAAGGTTTTCGGGCACTATAGTTGGAGTTGACGACTCATCTCCTCACTGGCCCAATTCGATATGGCGATCACTGAGAGTTCAATGGGATGAACTTGCATCTATTCAGAGACCTGATAGAGTTTCACCATGGGAGATTGAACCTTTTGTGGCTCCTACGTCCCCGAGCATTCCGCAATCAATTTCGGTTAAGAATAAAAGGCCTCGACCTCCACTTGAAATTCTAGATTCTGATAATTCAACCGTAACAACTCTACGACATTCAGGATCAACTCAATCACATGATGATAGAACACAACTGGGTATTGCTGCTGCTGACATTAAACGATTTGAAAATCATGCAACATGGCCTTACAAGCAAACGGATGTTAGCAGCAATGGGAATTCTGTATCCAGGACTCTGAAGGAGGGTTCTTGGTTAACTTCCCCGAATGGGAGTGTTTCTCAGCATCGGTTACAGGATTTGACAGATGACCGTAAAAGTAATTCTGTTTGGTCCACGGTCTTCCCAGGAGTGTCAACATCACACTCGACATGTCCAACTCCACACTCACCAAATCTGAAGAGTGACCAAGTACACGACCTTGGGGAAGAGGGGAGGAAAACTGAGGGGGCTCCAAGCTGTCGTTTGTTCGGGATCGAGCTGATTAGTCATTCTAAAAGTCCAGTTCCACCTGAAAGGGCAGCTGATCAACTGATTTGCGCACCAAATGAAATTAGGACTAATGCAGAGCAGAACTCGAACCTGTCAAAGGCTTCTAAAGAAAGAAAATTAGGACTTCTACAAGCACCTCCTAAAGAGATCCAGCACAAGCAGAACAGCTCGACTAACAGTCGAAGCCGTACCAAGGTTCAAATGCAGGGGATGGCTGTCGGACGTGCGGTGGACCTTACCACATTGGAAGGGTATGGCCAACTCATTGATGAACTGGAAAAGATGTTCGACATCAAGGGAGAAATTCGCCCTCGTGATAAGTGGGAAATTGTCTTCACTGACGATGAAGGAGATATGATGCTCATGGGCGATTACCCGTGGCAGGAATTCTGCAACATGGTGAGAAGAATATTTATATGGTCAAGTCAGGATGTGAAGAAGATGAGTTCAGGTAGCAAACTTGCAATGTCTACAATCGAATGTGACGAGACGGTAATAACCTCGGAGTCGGCCGAAAGTTGA 2106 46.06 MANRGGGSFSPPNLSIQGWGGGGDELYTELWRVSAGPLVEVPRVNDKVFYFPQGHMEQLEASTNKELSQKLPSFNLSSKVLCHVVDVRLLAELETDEVYSQITLMPDGNQDEPTSPKPSPLAGRKQKVHSFCKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDSFVFLRGENGDLRVGVRRLARQQSSMPSSVISSHSMHLGVLATASHAVSTQTRFVVYYKPRASQFIVSVSKYIEATNSKFLVGMRFKMRFEGDESLERRFSGTIVGVDDSSPHWPNSIWRSLRVQWDELASIQRPDRVSPWEIEPFVAPTSPSIPQSISVKNKRPRPPLEILDSDNSTVTTLRHSGSTQSHDDRTQLGIAAADIKRFENHATWPYKQTDVSSNGNSVSRTLKEGSWLTSPNGSVSQHRLQDLTDDRKSNSVWSTVFPGVSTSHSTCPTPHSPNLKSDQVHDLGEEGRKTEGAPSCRLFGIELISHSKSPVPPERAADQLICAPNEIRTNAEQNSNLSKASKERKLGLLQAPPKEIQHKQNSSTNSRSRTKVQMQGMAVGRAVDLTTLEGYGQLIDELEKMFDIKGEIRPRDKWEIVFTDDEGDMMLMGDYPWQEFCNMVRRIFIWSSQDVKKMSSGSKLAMSTIECDETVITSESAES 701
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 10325207 10331715 + Hsped.07g08300.1 Hepe07g0830 574225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g0830 701 ProSiteProfiles B3 DNA-binding domain profile. 131 233 IPR003340 GO:0003677(InterPro)
Hepe07g0830 701 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 25 678 IPR044835 GO:0003677(InterPro)|GO:0006355(InterPro)|GO:0009725(InterPro)
Hepe07g0830 701 ProSiteProfiles PB1 domain profile. 589 681 IPR053793 -
Hepe07g0830 701 Gene3D - 584 677 - -
Hepe07g0830 701 MobiDBLite consensus disorder prediction 482 513 - -
Hepe07g0830 701 MobiDBLite consensus disorder prediction 365 386 - -
Hepe07g0830 701 Pfam AUX/IAA family 568 625 IPR033389 -
Hepe07g0830 701 Pfam AUX/IAA family 636 673 IPR033389 -
Hepe07g0830 701 MobiDBLite consensus disorder prediction 482 498 - -
Hepe07g0830 701 FunFam Auxin response factor 292 363 - -
Hepe07g0830 701 Gene3D - 128 232 IPR015300 -
Hepe07g0830 701 MobiDBLite consensus disorder prediction 103 123 - -
Hepe07g0830 701 FunFam Auxin response factor 584 677 - -
Hepe07g0830 701 Pfam B3 DNA binding domain 131 231 IPR003340 GO:0003677(InterPro)
Hepe07g0830 701 Gene3D - 292 363 - -
Hepe07g0830 701 FunFam Auxin response factor 129 233 - -
Hepe07g0830 701 MobiDBLite consensus disorder prediction 572 593 - -
Hepe07g0830 701 SUPERFAMILY CAD & PB1 domains 583 665 - -
Hepe07g0830 701 CDD B3_DNA 129 231 IPR003340 GO:0003677(InterPro)
Hepe07g0830 701 SMART B3_2 131 233 IPR003340 GO:0003677(InterPro)
Hepe07g0830 701 MobiDBLite consensus disorder prediction 577 593 - -
Hepe07g0830 701 Pfam Auxin response factor 257 335 IPR010525 GO:0003677(InterPro)|GO:0005634(InterPro)|GO:0006355(InterPro)|GO:0009725(InterPro)
Hepe07g0830 701 SUPERFAMILY DNA-binding pseudobarrel domain 124 260 IPR015300 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g0670 Hepe-Chr3:15586492 Hepe07g0830 Hepe-Chr7:10325207 1.45e-251 dispersed
Hepe06g1463 Hepe-Chr6:65217889 Hepe07g0830 Hepe-Chr7:10325207 7.38e-283 dispersed
Hepe07g0830 Hepe-Chr7:10325207 Hepe09g0011 Hepe-Chr9:120331 2.40e-177 dispersed
Hepe07g0830 Hepe-Chr7:10325207 Hepe08g0874 Hepe-Chr8:7925941 3.16e-134 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
55948 PF02362 B3 1.70E-21 CL0405 Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g0830 K14486 - csv:101213942 1170.22