Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe07g0830 | ATGGCTAATCGGGGAGGGGGTTCGTTTTCTCCCCCAAATCTTTCAATTCAAGGTTGGGGAGGAGGAGGAGATGAACTTTACACTGAGCTTTGGAGGGTCTCTGCTGGCCCTCTTGTGGAAGTTCCTCGAGTTAATGATAAGGTTTTCTATTTTCCTCAAGGCCATATGGAACAGTTGGAGGCATCTACAAATAAGGAGCTTAGTCAGAAACTTCCTTCGTTTAATCTTTCCTCCAAAGTACTTTGTCATGTAGTTGATGTTCGCCTGCTGGCAGAGCTGGAAACAGACGAGGTTTATTCACAGATAACTTTAATGCCGGATGGAAATCAAGATGAACCTACAAGTCCTAAACCTTCACCTCTGGCTGGTCGAAAACAGAAAGTCCATTCATTTTGCAAGGTTTTAACTGCTTCTGATACTAGCACCCATGGGGGGTTTTCCGTGCTTCGTAAACATGCCACAGAATGCCTGCCTCCATTGGATATGACCCAGCAGACCCCGACTCAGGAACTCGTTGCCAAAGATCTTCACGGTTACGAGTGGCGATTCAAGCATATTTTTAGGGGTCAACCGCGAAGGCATTTGCTGACGACCGGATGGAGCACCTTTGTTACTTCTAAGAGATTAGTTGCTGGAGACTCTTTTGTGTTCTTGAGGGGGGAAAATGGAGACTTGCGAGTTGGAGTGAGACGTCTTGCTCGCCAACAAAGCAGTATGCCTTCATCTGTGATTTCGAGTCACAGCATGCACTTAGGAGTGCTTGCTACTGCATCTCATGCCGTGTCAACTCAAACTCGCTTTGTTGTCTATTATAAGCCAAGGGCAAGCCAGTTTATCGTGAGCGTGAGTAAGTACATTGAAGCGACGAACAGTAAGTTCTTAGTCGGGATGAGGTTCAAGATGAGGTTTGAGGGAGATGAGTCTCTAGAGAGAAGGTTTTCGGGCACTATAGTTGGAGTTGACGACTCATCTCCTCACTGGCCCAATTCGATATGGCGATCACTGAGAGTTCAATGGGATGAACTTGCATCTATTCAGAGACCTGATAGAGTTTCACCATGGGAGATTGAACCTTTTGTGGCTCCTACGTCCCCGAGCATTCCGCAATCAATTTCGGTTAAGAATAAAAGGCCTCGACCTCCACTTGAAATTCTAGATTCTGATAATTCAACCGTAACAACTCTACGACATTCAGGATCAACTCAATCACATGATGATAGAACACAACTGGGTATTGCTGCTGCTGACATTAAACGATTTGAAAATCATGCAACATGGCCTTACAAGCAAACGGATGTTAGCAGCAATGGGAATTCTGTATCCAGGACTCTGAAGGAGGGTTCTTGGTTAACTTCCCCGAATGGGAGTGTTTCTCAGCATCGGTTACAGGATTTGACAGATGACCGTAAAAGTAATTCTGTTTGGTCCACGGTCTTCCCAGGAGTGTCAACATCACACTCGACATGTCCAACTCCACACTCACCAAATCTGAAGAGTGACCAAGTACACGACCTTGGGGAAGAGGGGAGGAAAACTGAGGGGGCTCCAAGCTGTCGTTTGTTCGGGATCGAGCTGATTAGTCATTCTAAAAGTCCAGTTCCACCTGAAAGGGCAGCTGATCAACTGATTTGCGCACCAAATGAAATTAGGACTAATGCAGAGCAGAACTCGAACCTGTCAAAGGCTTCTAAAGAAAGAAAATTAGGACTTCTACAAGCACCTCCTAAAGAGATCCAGCACAAGCAGAACAGCTCGACTAACAGTCGAAGCCGTACCAAGGTTCAAATGCAGGGGATGGCTGTCGGACGTGCGGTGGACCTTACCACATTGGAAGGGTATGGCCAACTCATTGATGAACTGGAAAAGATGTTCGACATCAAGGGAGAAATTCGCCCTCGTGATAAGTGGGAAATTGTCTTCACTGACGATGAAGGAGATATGATGCTCATGGGCGATTACCCGTGGCAGGAATTCTGCAACATGGTGAGAAGAATATTTATATGGTCAAGTCAGGATGTGAAGAAGATGAGTTCAGGTAGCAAACTTGCAATGTCTACAATCGAATGTGACGAGACGGTAATAACCTCGGAGTCGGCCGAAAGTTGA | 2106 | 46.06 | MANRGGGSFSPPNLSIQGWGGGGDELYTELWRVSAGPLVEVPRVNDKVFYFPQGHMEQLEASTNKELSQKLPSFNLSSKVLCHVVDVRLLAELETDEVYSQITLMPDGNQDEPTSPKPSPLAGRKQKVHSFCKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDSFVFLRGENGDLRVGVRRLARQQSSMPSSVISSHSMHLGVLATASHAVSTQTRFVVYYKPRASQFIVSVSKYIEATNSKFLVGMRFKMRFEGDESLERRFSGTIVGVDDSSPHWPNSIWRSLRVQWDELASIQRPDRVSPWEIEPFVAPTSPSIPQSISVKNKRPRPPLEILDSDNSTVTTLRHSGSTQSHDDRTQLGIAAADIKRFENHATWPYKQTDVSSNGNSVSRTLKEGSWLTSPNGSVSQHRLQDLTDDRKSNSVWSTVFPGVSTSHSTCPTPHSPNLKSDQVHDLGEEGRKTEGAPSCRLFGIELISHSKSPVPPERAADQLICAPNEIRTNAEQNSNLSKASKERKLGLLQAPPKEIQHKQNSSTNSRSRTKVQMQGMAVGRAVDLTTLEGYGQLIDELEKMFDIKGEIRPRDKWEIVFTDDEGDMMLMGDYPWQEFCNMVRRIFIWSSQDVKKMSSGSKLAMSTIECDETVITSESAES | 701 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 10325207 | 10331715 | + | Hsped.07g08300.1 | Hepe07g0830 | 574225 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe07g0830 | 701 | ProSiteProfiles | B3 DNA-binding domain profile. | 131 | 233 | IPR003340 | GO:0003677(InterPro) | |
Hepe07g0830 | 701 | PANTHER | AUXIN RESPONSE FACTOR 4-RELATED | 25 | 678 | IPR044835 | GO:0003677(InterPro)|GO:0006355(InterPro)|GO:0009725(InterPro) | |
Hepe07g0830 | 701 | ProSiteProfiles | PB1 domain profile. | 589 | 681 | IPR053793 | - | |
Hepe07g0830 | 701 | Gene3D | - | 584 | 677 | - | - | |
Hepe07g0830 | 701 | MobiDBLite | consensus disorder prediction | 482 | 513 | - | - | |
Hepe07g0830 | 701 | MobiDBLite | consensus disorder prediction | 365 | 386 | - | - | |
Hepe07g0830 | 701 | Pfam | AUX/IAA family | 568 | 625 | IPR033389 | - | |
Hepe07g0830 | 701 | Pfam | AUX/IAA family | 636 | 673 | IPR033389 | - | |
Hepe07g0830 | 701 | MobiDBLite | consensus disorder prediction | 482 | 498 | - | - | |
Hepe07g0830 | 701 | FunFam | Auxin response factor | 292 | 363 | - | - | |
Hepe07g0830 | 701 | Gene3D | - | 128 | 232 | IPR015300 | - | |
Hepe07g0830 | 701 | MobiDBLite | consensus disorder prediction | 103 | 123 | - | - | |
Hepe07g0830 | 701 | FunFam | Auxin response factor | 584 | 677 | - | - | |
Hepe07g0830 | 701 | Pfam | B3 DNA binding domain | 131 | 231 | IPR003340 | GO:0003677(InterPro) | |
Hepe07g0830 | 701 | Gene3D | - | 292 | 363 | - | - | |
Hepe07g0830 | 701 | FunFam | Auxin response factor | 129 | 233 | - | - | |
Hepe07g0830 | 701 | MobiDBLite | consensus disorder prediction | 572 | 593 | - | - | |
Hepe07g0830 | 701 | SUPERFAMILY | CAD & PB1 domains | 583 | 665 | - | - | |
Hepe07g0830 | 701 | CDD | B3_DNA | 129 | 231 | IPR003340 | GO:0003677(InterPro) | |
Hepe07g0830 | 701 | SMART | B3_2 | 131 | 233 | IPR003340 | GO:0003677(InterPro) | |
Hepe07g0830 | 701 | MobiDBLite | consensus disorder prediction | 577 | 593 | - | - | |
Hepe07g0830 | 701 | Pfam | Auxin response factor | 257 | 335 | IPR010525 | GO:0003677(InterPro)|GO:0005634(InterPro)|GO:0006355(InterPro)|GO:0009725(InterPro) | |
Hepe07g0830 | 701 | SUPERFAMILY | DNA-binding pseudobarrel domain | 124 | 260 | IPR015300 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe03g0670 | Hepe-Chr3:15586492 | Hepe07g0830 | Hepe-Chr7:10325207 | 1.45e-251 | dispersed | |
Hepe06g1463 | Hepe-Chr6:65217889 | Hepe07g0830 | Hepe-Chr7:10325207 | 7.38e-283 | dispersed | |
Hepe07g0830 | Hepe-Chr7:10325207 | Hepe09g0011 | Hepe-Chr9:120331 | 2.40e-177 | dispersed | |
Hepe07g0830 | Hepe-Chr7:10325207 | Hepe08g0874 | Hepe-Chr8:7925941 | 3.16e-134 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
55948 | PF02362 | B3 | 1.70E-21 | CL0405 | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe07g0830 | K14486 | - | csv:101213942 | 1170.22 |