Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g0840 ATGGGCATCTGTCTGGTCAAATTTTCTGGCTTGTTGGTTCTTCACGTTCTACTTTTTTGTATGGCAATGAGTAAAAGCACTGGCCTCACATCTGATGGCGAGGCACTTCTAAGCTTTAGGATGGCAGTTGCCAGTTCTGATGGGGTCATCTTTCAGTGGAGACCAGAGGATCCAAACCCTTGTAACTGGACAGGAGTGGTCTGCGATTCAAAAACGAAGAGAGTAATCTCATTGAAGCTTGCAAGTCACAAACTGAGTGGGTTCATTGCACCTGAACTTGGGAAGCTAGACCATTTGAAGACCCTAACTCTTGCGGACAACAACCTATATGGAACAATACCATCAGAACTGGGAAATTGCTCGCAGTTGCAGGGAATGTTCTTGCAAAGAAACTACCTAAGTGGAGTGATTCCCTATGAGCTGGGAAACCTTTCTGAGTTGGAAATGTTAGACGTTTCAAGCAACTCACTTAGTGGAAATATCCCAACGTCCCTTGGGAATTTGGATAAGCTCGCTATTCTCAACGTGTCATCAAATTTTTTAATTGGACCACTACCTTCTGATGGTGTTCTTTCCAAGTTTTCAAAGACTTCCTTTGTTGGAAATCGTGGTTTGTGTGGTAAACAAGTCAGTGTCACTTGCAAAAACGATAACACAGGATCTGGAGCAAATTCTGACTCCTCAAGCTCAGGCCAAAATCAAATGAGGAGGAAGTACTCTGGTCGGCTGCTCATAAGTGCATCAGCTACAGTGGGGGCACTACTACTTGTTGCTCTTATGTGTTTCTGGGGTTGCTTTCTTTATAAAAAATTTGGCAAAAATGAAAAGAAAGGTCTTGCGAAGAATGTCGGTGGAGGTGCATCGATTGTGATGTTTCATGGAGACTTGCCATACTCTTCAAAAGACATCATGAAGAAGTTGGAAACCTTGAATGAGGAACACATAATCGGTTCTGGGGGTTTTGGAACTGTTTACAAGCTTGCAATGGATGATGGCAATGTATTTGCTTTGAAAAATATTGTAAAGATAAATGAGGGGTTTGATCACTTTTTTGAGAGGGAACTTGAAATTCTTGGAAGTTTAAAGCATCGGTACCTTGTTAATTTGAGAGGATATTGCAACTCTCCCACATCGAAACTGTTGATTTATGATTACCTATCTGGGGGCAGCCTTGATGAGGCCCTTCATGATAGATCTGAGCCATTAGATTGGGACACACGTTTGAATATTATATTCGGAGCAGCAAAAGGGCTTGCCTATCTACACCATGATTGTTCACCTAGAATCATACATCGGGATATCAAGTCAAGCAACATTTTACTTGATGGCAATCTGGATGCTCGAGTTTCTGACTTTGGACTTGCCAAGCTTCTGGACGATGATAAATCTCACATTACAACCATTGTTGCCGGAACATTTGGTTATTTGGCCCCCGAATATATGCAAAGTGGTAGAGCGACTGAAAAGACCGATGTATATAGTTTTGGAGTCCTGGTACTTGAAGTACTGAGTGGAAAACGACCTACGGATGCATCATTTATTGAGAAAGGCCTGAACATTGTTGGCTGGCTAAATTTTCTTATCACGGAGAACAGGCAACGAGAAATAGTTGATACGCAATGTGAAGGAGTGCAGACAGAAACTCTAGACTCATTGCTCAGGCTTGCTATTCAGTGTATTTCTTCTAGTCCAGACGACCGACCGACCATGCACCGAGTAGTCCAGTTCTTTGAATCTGAGGTTATGACACCGTGCCCAAGTGACTTCGATGATTCCAATTCTGATTAA 1788 42.45 MGICLVKFSGLLVLHVLLFCMAMSKSTGLTSDGEALLSFRMAVASSDGVIFQWRPEDPNPCNWTGVVCDSKTKRVISLKLASHKLSGFIAPELGKLDHLKTLTLADNNLYGTIPSELGNCSQLQGMFLQRNYLSGVIPYELGNLSELEMLDVSSNSLSGNIPTSLGNLDKLAILNVSSNFLIGPLPSDGVLSKFSKTSFVGNRGLCGKQVSVTCKNDNTGSGANSDSSSSGQNQMRRKYSGRLLISASATVGALLLVALMCFWGCFLYKKFGKNEKKGLAKNVGGGASIVMFHGDLPYSSKDIMKKLETLNEEHIIGSGGFGTVYKLAMDDGNVFALKNIVKINEGFDHFFERELEILGSLKHRYLVNLRGYCNSPTSKLLIYDYLSGGSLDEALHDRSEPLDWDTRLNIIFGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLDARVSDFGLAKLLDDDKSHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLITENRQREIVDTQCEGVQTETLDSLLRLAIQCISSSPDDRPTMHRVVQFFESEVMTPCPSDFDDSNSD 595
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 10597574 10605086 - Hsped.07g08400.1 Hepe07g0840 574235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g0840 595 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 386 588 - -
Hepe07g0840 595 Gene3D Ribonuclease Inhibitor 29 215 IPR032675 -
Hepe07g0840 595 SUPERFAMILY Protein kinase-like (PK-like) 292 577 IPR011009 -
Hepe07g0840 595 ProSiteProfiles Protein kinase domain profile. 310 582 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g0840 595 SMART serkin_6 310 577 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g0840 595 SUPERFAMILY L domain-like 30 196 - -
Hepe07g0840 595 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 29 191 - -
Hepe07g0840 595 ProSitePatterns Protein kinases ATP-binding region signature. 316 338 IPR017441 GO:0005524(InterPro)
Hepe07g0840 595 Pfam Leucine rich repeat N-terminal domain 30 69 IPR013210 -
Hepe07g0840 595 Pfam Leucine rich repeat 98 157 IPR001611 GO:0005515(InterPro)
Hepe07g0840 595 ProSitePatterns Serine/Threonine protein kinases active-site signature. 429 441 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe07g0840 595 Gene3D Phosphorylase Kinase; domain 1 283 385 - -
Hepe07g0840 595 FunFam LRR receptor-like serine/threonine-protein kinase FEI 1 284 385 - -
Hepe07g0840 595 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 165 579 IPR050647 -
Hepe07g0840 595 Pfam Protein kinase domain 312 575 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g0840 595 Gene3D Transferase(Phosphotransferase) domain 1 386 584 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g1565 Hepe-Chr1:80849149 Hepe07g0840 Hepe-Chr7:10597574 5.16e-286 dispersed
Hepe07g0840 Hepe-Chr7:10597574 Hepe09g0139 Hepe-Chr9:1102754 8.12e-145 dispersed
Hepe07g0840 Hepe-Chr7:10597574 Hepe07g2279 Hepe-Chr7:67118446 1.93e-158 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72931 PF00069 Pkinase 2.70E-47 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g0840 - - - 0.0