Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hepe07g0859 | ATGGGATCCAGTGGGAGTAAATCGTCCACCAGGTCGCCGTCGTCGTCGTCAGCGGCGGCGGTGACTCGCTCATGTTCTGGGAGAATCCGGAGGAAGAGTTCCATGGGCCGTAGAGTTTTTCAGTCTGCTTGCCTTGGTATGCCCTCTGGATCGCACCATAGCGACAATGACGATAATGATTTTGAAAGTGAGAGAAAAAAAAATGCTCATGATTATTCATCTGCAAATCAGACTTCTCAAGCGTTAGATCAGATGAAAATCGAGGGTTACAGAAGGGTCAAAGCTGAGGAATCTCTTGAAGTCCCTTGCATATCATCGAATGTTGAGCTTGATGGATGGGATCGAACAGGTGTTGCTGTTACAGCCCCCAGAGCTGGAAGTACCTCTGCTCGTGCATCTTCCCTTCAATCGTTGAACCCTTCGAGTAACTTCCTTTCTCGCTTTAGTTTCATTCCCGGCAATGTAAGCTTCAGACTTAGTAGAGCAAGCAGTTTAGGATCATCTAGATCTTATCCTGTGTCTTCAACAAATCTCTCAATGTTGAATGATGAAGACGAACTTCATTTATCGAACAGGCCTTTGGGTGATCGAGATGAAACTCAGCAAGGTAGGGACTTGCTACCTGCATCGCTAGCTAGTGCAACTCATACTCACTGTTATGGAGATAGTTCTGCTAATTTTAGGGTAAATACACAAGCTTCTGGTCTTTCTGATAACTTACAAGACAATCAGGCAGTTTCTTCTACCAATGACATGGCTGGTGCTTGTGATAATTCTAGAGTAGAGCCTGATGGAAACCTTTCCCATCCTCAAACTCTACCTGAAAATGAAAGCAGTGAGATTAGACAATCTGACAGACGGACTGGATCTAGGGAACCAGTTGAACGCAATTTTCGTTTCAGTCGGACCCTCAGTGTTGGAAGACTCCGTGATAGAGTTCTTCGTAGATCATCGTTATCTGACTTCACATTTTGTCCTCAGCAACAAGAGGGAGAGGAGAGAGATGCAAGTCAGAGTGGCAACGACCGACATGTCTGGACTGCTGAGACAAGGCCTTTGTCATCTGAAGATAATTCTATGACCTCTCCAACAACATCAGGTTATCCAGCTTCTAGTCTATCTAGTTCCTTGTTCAGCACCCAAGATTATGAAATGGAAACTACCCAACCTAGAGAAGCTAGATATCACGATTTGCTGGAACACCGGTCAAATTTCCTTGAACGGAGAAGAAGAATACGTTCCCAGGTTCGTGCCCTACAGCGGTTGGGAAGTCGCTTTGAGAACCTATCTGGGCATGAGAGATCATGTATATTATCTGGTCAACATAGAACTGGTCATTGTACTTGTCGTATCAATAATCGTGACACAAATATAAACGATAACACCAGTGCTAGAGCCAGTATATCAAGAATTGTAATGTTAGCTGAAGCCTTATTTGAGGTTCTGGATGAAATTCACCAGCAATCTGTAGTTTTATCCTCCCGCCCTGCATCTTCGATTGGTTCTCTGCCTGCACCGAACGATGTTGTAGATTCTTTGCCTGTTAAATTTTACTCCAAGTTGCTAAAGCATCAAAGCGAGGAAGCTGCCCAATGCTACATATGTCTGGTCGAGTACGAGGAAGGAGATAGCATGAGAGTGTTGCCTTGCAATCATGAATTTCATTCAGCATGTGTAGACAAGTGGCTGAAGGAGATCCACAGGTATTATCGGGTCCACGCAGCCTTTTCTGCATCTCAAATTGCATACATGGATGAATGCCCCATTTTCTGGTATTTTTGGAACATGTCATGTGACTTGTCATCTAGTATATATCATACACTTGCTAGTTTCACAGATATCATTCATGGGGTGGGCCTGACTTCATATGCTCAAACATTAGATACATTATGCCACGAGTCACGACGCACTGAATAA | 1917 | 44.13 | MGSSGSKSSTRSPSSSSAAAVTRSCSGRIRRKSSMGRRVFQSACLGMPSGSHHSDNDDNDFESERKKNAHDYSSANQTSQALDQMKIEGYRRVKAEESLEVPCISSNVELDGWDRTGVAVTAPRAGSTSARASSLQSLNPSSNFLSRFSFIPGNVSFRLSRASSLGSSRSYPVSSTNLSMLNDEDELHLSNRPLGDRDETQQGRDLLPASLASATHTHCYGDSSANFRVNTQASGLSDNLQDNQAVSSTNDMAGACDNSRVEPDGNLSHPQTLPENESSEIRQSDRRTGSREPVERNFRFSRTLSVGRLRDRVLRRSSLSDFTFCPQQQEGEERDASQSGNDRHVWTAETRPLSSEDNSMTSPTTSGYPASSLSSSLFSTQDYEMETTQPREARYHDLLEHRSNFLERRRRIRSQVRALQRLGSRFENLSGHERSCILSGQHRTGHCTCRINNRDTNINDNTSARASISRIVMLAEALFEVLDEIHQQSVVLSSRPASSIGSLPAPNDVVDSLPVKFYSKLLKHQSEEAAQCYICLVEYEEGDSMRVLPCNHEFHSACVDKWLKEIHRYYRVHAAFSASQIAYMDECPIFWYFWNMSCDLSSSIYHTLASFTDIIHGVGLTSYAQTLDTLCHESRRTE | 638 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 10814854 | 10817867 | + | Hsped.07g08590.1 | Hepe07g0859 | 574254 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hepe07g0859 | 638 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 494 | 589 | IPR013083 | - | |
| Hepe07g0859 | 638 | PANTHER | RING/U-BOX SUPERFAMILY PROTEIN | 1 | 568 | - | - | |
| Hepe07g0859 | 638 | SMART | ring_2 | 532 | 590 | IPR001841 | - | |
| Hepe07g0859 | 638 | MobiDBLite | consensus disorder prediction | 264 | 278 | - | - | |
| Hepe07g0859 | 638 | MobiDBLite | consensus disorder prediction | 1 | 29 | - | - | |
| Hepe07g0859 | 638 | MobiDBLite | consensus disorder prediction | 53 | 71 | - | - | |
| Hepe07g0859 | 638 | ProSiteProfiles | Zinc finger RING-type profile. | 532 | 589 | IPR001841 | - | |
| Hepe07g0859 | 638 | MobiDBLite | consensus disorder prediction | 279 | 294 | - | - | |
| Hepe07g0859 | 638 | MobiDBLite | consensus disorder prediction | 185 | 201 | - | - | |
| Hepe07g0859 | 638 | MobiDBLite | consensus disorder prediction | 351 | 374 | - | - | |
| Hepe07g0859 | 638 | MobiDBLite | consensus disorder prediction | 1 | 83 | - | - | |
| Hepe07g0859 | 638 | MobiDBLite | consensus disorder prediction | 348 | 374 | - | - | |
| Hepe07g0859 | 638 | MobiDBLite | consensus disorder prediction | 249 | 294 | - | - | |
| Hepe07g0859 | 638 | SUPERFAMILY | RING/U-box | 510 | 566 | - | - | |
| Hepe07g0859 | 638 | Pfam | Ring finger domain | 531 | 565 | IPR001841 | - | |
| Hepe07g0859 | 638 | MobiDBLite | consensus disorder prediction | 182 | 201 | - | - | |
| Hepe07g0859 | 638 | FunFam | Putative RING zinc finger domain superfamily protein | 500 | 574 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Hepe07g0859 | Hepe-Chr7:10814854 | Hepe09g0621 | Hepe-Chr9:5776749 | 1.15e-38 | dispersed | |
| Hepe07g0859 | Hepe-Chr7:10814854 | Hepe02g2233 | Hepe-Chr2:63360138 | 5.65e-08 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hepe07g0859 | - | - | - | 0.0 |