Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe07g0878 | ATGAATGTGGCGCCAATTCCAGGGCCGGGCGACATCGGAGCGCAGGCGGTGGCGATCAGAATCAGCGGCGACCAGGCGGCGTTTTGGAGCTGCGGATTCTTCGGCGCTCAAGACACTCTCCACGATGACCGCGGCCGCCATTACTTCAAGGATTGCTACATCCAAGGCTCCATCGATTTCATCTTCGGCAATGGAAAATCCTTCTACGAGAGTTGCCAGTTGATTTCGATGGCGAATCCGGTGCCGCAAGGATCGAAGTTCGTGAACGGAGCGGTGACGGCGCACGGCAGAGCCTCCGCCGACGAGAACTCTGGATATGCGTTTGTTAATTGCAGCATCGGCGGCACCGGCAGAGTGTGGCTCGGCCGCGCGTGGCGGCCGTTCTCTCGCGTCGTCTTCGCCAACACCGTCATGACGGATATAATTGCGTCGGAGGGGTGGAATGACTTTAATGACCCTACAAGAGATCAGACAATATTCTATGGAGAGTACAACTGCAGTGGAACAGGAGCCAATATGAGCGCAAGGGCTCCCTTTGTTCAGAGGCTGAATGATACTCAAGTTTCTCCTTTCCTTAACTTGACCTTCATTGATGCAGACCAATGGCTACAACCCTATTGA | 621 | 54.75 | MNVAPIPGPGDIGAQAVAIRISGDQAAFWSCGFFGAQDTLHDDRGRHYFKDCYIQGSIDFIFGNGKSFYESCQLISMANPVPQGSKFVNGAVTAHGRASADENSGYAFVNCSIGGTGRVWLGRAWRPFSRVVFANTVMTDIIASEGWNDFNDPTRDQTIFYGEYNCSGTGANMSARAPFVQRLNDTQVSPFLNLTFIDADQWLQPY | 206 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 11264453 | 11268929 | - | Hsped.07g08780.1 | Hepe07g0878 | 574273 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe07g0878 | 206 | SUPERFAMILY | Pectin lyase-like | 12 | 205 | IPR011050 | - | |
Hepe07g0878 | 206 | Pfam | Pectinesterase | 11 | 199 | IPR000070 | GO:0030599(InterPro)|GO:0042545(InterPro) | |
Hepe07g0878 | 206 | Gene3D | - | 2 | 206 | IPR012334 | - | |
Hepe07g0878 | 206 | ProSitePatterns | Pectinesterase signature 2. | 54 | 63 | IPR033131 | - | |
Hepe07g0878 | 206 | PANTHER | ACYL-COA THIOESTER HYDROLASE YBHC-RELATED | 9 | 204 | - | GO:0030599(PANTHER)|GO:0045490(PANTHER)|GO:0052689(PANTHER) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe07g0878 | Hepe-Chr7:11264453 | Hepe09g0821 | Hepe-Chr9:8035990 | 2.75e-75 | dispersed | |
Hepe07g0878 | Hepe-Chr7:11264453 | Hepe10g0628 | Hepe-Chr10:7799371 | 1.24e-58 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe07g0878 | - | - | - | 0.0 |