Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g0886 ATGCTTCGTAGTTTACTCCTCCCCCATTCCCCCATCAATTCCTCTTCCAATTCCCCTTCCTCCGCCATGAAATCCAAGCGCTCCGATGCCGATTCCGATGATCCTTCCTCCAAGAGGCTCAATTCTGGTCCCAGCAACTTCGACGCCGGTGGGTACTCCGGCGACAAGGCGACCATGGAGGAGGAGGATGAAGAAGAAGATTTAGAAGAGGAACCACCACTCGTCGACGGTAGCGAGTCCACTGGTTTGAGATTGCTTGGTCTTCTCCTTCAATGCGCCGAGTGCGTCGCTATGGATAATCTCCAGGAGGCCAACGATCTCTTACCGGAGATCTCTGAGCTCTCCTCGCCGTTCGGTACCTCACCTGAACGAGTCGGCGCGTACTTCGCTCACGCGCTTCAAGCCAGAGTTATAAGCTCCTGTTTAGGAACTTACTCGCCGTTGACGATCAGAACGCTCAATCAAACTCAATCGCAGAGGATTTTCAATGCTCTGCAATCCTACAATTCCATCAGTCCGTTGATCAAATTCTCACACTTCACCGCCAATCAAGCCATCTTCCAAGCGTTAGACGGCGAGGATCGAGTCCACGTTATCGATCTCGATGTAATGCAAGGTCTCCAATGGCCAGGTTTGTTCCACATCCTCGCCTCCCGTCCGAAGAAGATCCAATCCCTACGAATCTCCGGATTCGGATCCTCCTCCGATTTGCTCCAATCCACCGGCCGGAGACTCGCCGATTTCGCAAGTTCTCTAGGTCTCCCATTCGAATTTCATCCAGTGGAAGGCAAAATTGGAAACCTAGCGAACCCTAACCAACTGGAATTGAGGCCCGGCGAGGCTCTGGTGGTTCACTGGATGCACCATTGCTTGTACGACATAACAGGAAGCGATTTACAGACGCTGAGATTGATTTCAACTCTGAAACCAAAACTGATCACGATTATCGAACAAGATCTGAGCCATGGGGGAAGTTTTCTAGGAAGATTCGTGGAAGCTCTGCATTATTACAGCGCGTTGTTCGACGCGCTTGGAGATAGCTTGGCTGTGGATAGCTTAGAAAGGCATGTGGTTGAGCAGCAATTGTTTGGGTGTGAGATTAGGAACATTATCGCCATTGGTGGACCCAAGAGAACTGGAGAAGTGAAGGTGGAGAGATGGGGAGATGAACTGAGACGGGTCGGGTTTCGACCCGTCTCGCTCGGGGGAAACCCGGCTGCTCAGGCTAGTTTGCTTCTGGGAATGTTCCCTTGGAAAGGGTATACTCTGGTTGAGGAAAATGGGTGCCTCAAATTGGGATGGAAGGACCTATCTCTTCTCACAGCCTCGGCCTGGCAGCCCTCTCACTGA 1350 51.7 MLRSLLLPHSPINSSSNSPSSAMKSKRSDADSDDPSSKRLNSGPSNFDAGGYSGDKATMEEEDEEEDLEEEPPLVDGSESTGLRLLGLLLQCAECVAMDNLQEANDLLPEISELSSPFGTSPERVGAYFAHALQARVISSCLGTYSPLTIRTLNQTQSQRIFNALQSYNSISPLIKFSHFTANQAIFQALDGEDRVHVIDLDVMQGLQWPGLFHILASRPKKIQSLRISGFGSSSDLLQSTGRRLADFASSLGLPFEFHPVEGKIGNLANPNQLELRPGEALVVHWMHHCLYDITGSDLQTLRLISTLKPKLITIIEQDLSHGGSFLGRFVEALHYYSALFDALGDSLAVDSLERHVVEQQLFGCEIRNIIAIGGPKRTGEVKVERWGDELRRVGFRPVSLGGNPAAQASLLLGMFPWKGYTLVEENGCLKLGWKDLSLLTASAWQPSH 449
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 11434288 11435791 - Hsped.07g08860.1 Hepe07g0886 574281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g0886 449 MobiDBLite consensus disorder prediction 8 25 - -
Hepe07g0886 449 MobiDBLite consensus disorder prediction 58 74 - -
Hepe07g0886 449 ProSiteProfiles GRAS family profile. 76 446 IPR005202 -
Hepe07g0886 449 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 60 445 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0043565(PANTHER)|GO:0048366(PANTHER)|GO:0090610(PANTHER)
Hepe07g0886 449 MobiDBLite consensus disorder prediction 1 78 - -
Hepe07g0886 449 Pfam GRAS domain family 87 446 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g2122 Hepe-Chr3:79291216 Hepe07g0886 Hepe-Chr7:11434288 6.68e-102 dispersed
Hepe04g0380 Hepe-Chr4:52416659 Hepe07g0886 Hepe-Chr7:11434288 2.05e-48 dispersed
Hepe06g1220 Hepe-Chr6:61818709 Hepe07g0886 Hepe-Chr7:11434288 4.32e-46 dispersed
Hepe07g0886 Hepe-Chr7:11434288 Hepe09g0079 Hepe-Chr9:671424 8.66e-65 dispersed
Hepe07g0886 Hepe-Chr7:11434288 Hepe04g0646 Hepe-Chr4:59714816 2.87e-157 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
55956 PF03514 GRAS 9.30E-117 CL0063 Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g0886 K27742 - csv:101212169 711.449