Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g0902 ATGGAAATGGAGTTAGCCAAGAAGATGAAGATGAAGATGATGATGATGATGATTGCAGTTCCAGTTATGTTGATTGTCATATCACAGCGATTATGGATGCCTTCTTTCGACTTTAATCTGCTCTGGACAACTCCTGCTCAACATGGTTACACAAACGATTCTCCCAAAAACAATGACAAATTCATCAATGGTCTTCTTCCTCCAGGCTTCAACGCAAGAACTTGCCTGAGCCGATACCAATTAAACCTCTACAGAAACCCCTCCCCTTACAAACCCTCTTCTCCTCTTCTTTCAAAGCTCCGTCGCTATGAAGCCCTCCACCGCCGCTGCGGCCCCAATTCCCCCTCCTTCCGCCGAGCCCTCGCCGGTCTCACCTCACCCACAAACTCCACATCCCCAACAGACGACTGCAAATACGCCGTCGTTTTAACCCGCGACGGCCTTGGCAACCGCATCCTCGCCATTATCTCTGCCTTCTTCTATGCCCTAATCTCCGATCGCGTCCTTCTAATCGACAGAGGCAACGCTCTCGATGACCTCTTCTGTGAGCCCTTTCTCGGATCCTCGTGGATTCTTCCTGCCGATTTCCCTCTCCGCCGTGAATTTGGGGCGTTCCGCCAGTCCTTCCCGGGGTCTTTCGGCAACGTTTTGAGAAATGAAATGTTGAAGAAAGAAATCGAAGATTCTCCTCCGGCTTATTTGTATCTTCATCTCTCTCATGACGCCGGCGATCACGATAAGCTCGTTTACTGCGACCGGCAGCAGAATCTTCTGAAGAAGGTCCCGTGGCTGATTATGGAGACGAATAACTACCTGGTTCCTGGATTTTTTCTGGTTCCTTCTTTCAGAGAAATGCTTGAGAAGCTCTTTCCGGCGAAGGACACCGTGTTCCACCATCTCGGTCGGTACCTCTTCCACCCGACGAACGGCGTCTGGGGGCTGATTTCAAGATCCTACAAGCCCTATCTCGCCAGAGCGAACGAAATGGTTGGGATTCAGATCCGGATTTTCGGGTCGGAATCCGGATCGGTTCACGACCAGATGAATCAGCTTATGGCTTGCACACAGAAGAATAAATTGCTGCCGGAGGTGGAGCCGTCGTCGTCGGAGAAGACGAATTCCACCACTTCACAGAAGGTGAAAGTCGTGCTGGTGACGTCTCTGAGCTCGCAGTATTCGGAAATCCTAAAGGACATGTACTTGGAGCATCCGGCCGTGGACGGAGAGGTGGTGGCGGTGTACCAGCCGAGTCACGAGGGGGTTCAGAGCTCCGACAAGACGGTGCACAACCGGAAGGCGCTGGCGGAGATGTACCTTCTGAGCTTGAGCGACGTGTTGGTGACGAGCGATTGGTCGACGTTTGGGTATGTGGCGCAGGGACTGGCCGGAGTGAAGCCATGGATGCTGTACAAGGCGGAGGAGAAGGTGTTTTGGGCGATGCAGTCGTGGCTGAAGTACAGAACGAGGAACGAGACGACCGGAGACTGGCCGTGCCGGCGGGCGGTGTCGATGGAGCCGTGCTTCCACACGCCGCCGGTGTGCGATTGCGATGAGATGAAGAGAAGGGATGCAGGGAATGTTGTGCCATTTGTTACGCATTGTGAAGATTCGAGTTGGGGCCTCAAATTAGTCGATAGAGATTAA 1644 52.8 MEMELAKKMKMKMMMMMIAVPVMLIVISQRLWMPSFDFNLLWTTPAQHGYTNDSPKNNDKFINGLLPPGFNARTCLSRYQLNLYRNPSPYKPSSPLLSKLRRYEALHRRCGPNSPSFRRALAGLTSPTNSTSPTDDCKYAVVLTRDGLGNRILAIISAFFYALISDRVLLIDRGNALDDLFCEPFLGSSWILPADFPLRREFGAFRQSFPGSFGNVLRNEMLKKEIEDSPPAYLYLHLSHDAGDHDKLVYCDRQQNLLKKVPWLIMETNNYLVPGFFLVPSFREMLEKLFPAKDTVFHHLGRYLFHPTNGVWGLISRSYKPYLARANEMVGIQIRIFGSESGSVHDQMNQLMACTQKNKLLPEVEPSSSEKTNSTTSQKVKVVLVTSLSSQYSEILKDMYLEHPAVDGEVVAVYQPSHEGVQSSDKTVHNRKALAEMYLLSLSDVLVTSDWSTFGYVAQGLAGVKPWMLYKAEEKVFWAMQSWLKYRTRNETTGDWPCRRAVSMEPCFHTPPVCDCDEMKRRDAGNVVPFVTHCEDSSWGLKLVDRD 547
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 11662520 11665120 + Hsped.07g09020.1 Hepe07g0902 574297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g0902 547 Gene3D - 317 479 - -
Hepe07g0902 547 Pfam Xyloglucan fucosyltransferase 480 516 IPR004938 GO:0008107(InterPro)|GO:0016020(InterPro)|GO:0042546(InterPro)
Hepe07g0902 547 Pfam Xyloglucan fucosyltransferase 49 475 IPR004938 GO:0008107(InterPro)|GO:0016020(InterPro)|GO:0042546(InterPro)
Hepe07g0902 547 PANTHER FUCOSYLTRANSFERASE 2-RELATED 6 545 IPR004938 GO:0005794(PANTHER)|GO:0008107(InterPro)|GO:0008417(PANTHER)|GO:0009969(PANTHER)|GO:0016020(InterPro)|GO:0042546(InterPro)
Hepe07g0902 547 FunFam Galactoside 2-alpha-L-fucosyltransferase 135 186 - -
Hepe07g0902 547 Gene3D - 134 183 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe07g0902 Hepe-Chr7:11662520 Hepe07g2497 Hepe-Chr7:69316781 1.08e-178 dispersed
Hepe07g0902 Hepe-Chr7:11662520 Hepe10g1764 Hepe-Chr10:54407827 6.25e-185 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g0902 K13681 - csv:101222105 847.04