Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g0909 ATGACTTGCTTCCCTTTTTTGTTCAGTAAGCGGGTAAAACCCCCAACAAGAAGTTTTGATGATGAAGAAGAACTTTCAGGCATTCACAATGTTAGATTTTACACATACAAAGAGCTAAAAGTTGCAACCGAAGATTTCAGCTTGGCGAATAAAATAGGGGAGGGCGGTTTTGGTTCTGTCTACAAGGGAAAGCTAAAAGATGGAAAGATTGCTGCCATAAAAGTTCTTTCGGCTGAGTCAAAACAAGGATTGAGGGAATTCTTGACAGAAATTAACGTCGTCTCTGTCATAGAACATGAAAATCTGGTTCAGCTTTATGGCTGCTGTGTGGATGATAATCATAGAATTCTTATCTACAATTACCTTGAGAACAACAGCCTTGCACAAACTCTTCTCGGGCGAGGTTACAGTTGCATCCAGTTTGATTGGCGAACAAGGTCTCAGATTTGCATCGGAATTGCACGCGGGCTTGCGTTCCTTCACGAGGATGTACACCCACATATCATTCATAGAGATATCAAAGCGAGCAACATTCTTCTTGACCGTGATCTCACTCCTAAAATTTCAGATTTCGGTCTTGCGAAGCTTATTCCAGCCAGCATGACTCACGTCAGTACACGAGTGGCGGGAACAATTGGTTACCTGGCACCGGAATATGCGATAAGAGGGCAGGTGACAAGAAAATCAGATATTTACAGTTTCGGCGTCCTCCTTGTGGAAATAGTCAGCGGGAGATGCAACACAAATACGCAATTACCAATTGGAGAACAATATCTTCTCGAAAGGACATGGAATCTTCATGAGCGAGGAGAGATCGTTCTGTTGATAGATATGTCCTTAAACGGCGACTTCGACGCTGAGGAGGCTTGTAATTACCTAAAGATTGGTCTACTTTGCACACAAGACAGTCCGAAACTCCGTCCATCCATGTCGACTGTGGTAAAGATGCTGACGGGCGAGATCAGTATCGAAGATAGAAAGATAACGAAACCCGGGCTGATTTCGGACTTCATGGATCTAAAAGTAAAGATTCCAGAGCAAAAGAAAGGTAACAGATCAGAGGGAGTGTCTTCTGATAGTCTATCCTCTGGATCAAACATCCTTGGAAATTCAACAATGTCATCAGAAAACTCAACTGTTACAACTGGAACCTTCACTGCACAATATGACAGAAACACTTTCTCATCTGTAATGTGA 1197 42.69 MTCFPFLFSKRVKPPTRSFDDEEELSGIHNVRFYTYKELKVATEDFSLANKIGEGGFGSVYKGKLKDGKIAAIKVLSAESKQGLREFLTEINVVSVIEHENLVQLYGCCVDDNHRILIYNYLENNSLAQTLLGRGYSCIQFDWRTRSQICIGIARGLAFLHEDVHPHIIHRDIKASNILLDRDLTPKISDFGLAKLIPASMTHVSTRVAGTIGYLAPEYAIRGQVTRKSDIYSFGVLLVEIVSGRCNTNTQLPIGEQYLLERTWNLHERGEIVLLIDMSLNGDFDAEEACNYLKIGLLCTQDSPKLRPSMSTVVKMLTGEISIEDRKITKPGLISDFMDLKVKIPEQKKGNRSEGVSSDSLSSGSNILGNSTMSSENSTVTTGTFTAQYDRNTFSSVM 398
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 11761970 11766237 + Hsped.07g09090.1 Hepe07g0909 574304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g0909 398 SMART serkin_6 46 317 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g0909 398 MobiDBLite consensus disorder prediction 354 379 - -
Hepe07g0909 398 Pfam Protein kinase domain 48 249 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g0909 398 CDD STKc_IRAK 52 319 - -
Hepe07g0909 398 Gene3D Phosphorylase Kinase; domain 1 17 121 - -
Hepe07g0909 398 FunFam cold-responsive protein kinase 1 17 121 - -
Hepe07g0909 398 SUPERFAMILY Protein kinase-like (PK-like) 23 317 IPR011009 -
Hepe07g0909 398 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 30 353 IPR052059 GO:0004674(PANTHER)|GO:0006468(PANTHER)
Hepe07g0909 398 MobiDBLite consensus disorder prediction 348 379 - -
Hepe07g0909 398 ProSitePatterns Serine/Threonine protein kinases active-site signature. 168 180 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe07g0909 398 ProSiteProfiles Protein kinase domain profile. 46 323 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g0909 398 ProSitePatterns Protein kinases ATP-binding region signature. 52 74 IPR017441 GO:0005524(InterPro)
Hepe07g0909 398 FunFam cold-responsive protein kinase 1 122 333 - -
Hepe07g0909 398 Gene3D Transferase(Phosphotransferase) domain 1 122 330 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe04g0926 Hepe-Chr4:63542133 Hepe07g0909 Hepe-Chr7:11761970 2.42e-117 dispersed
Hepe07g0909 Hepe-Chr7:11761970 Hepe07g0984 Hepe-Chr7:13399979 6.86e-166 dispersed
HepeContig65g0075 Hepe-ChrContig65:6350091 Hepe07g0909 Hepe-Chr7:11761970 1.42e-68 dispersed
Hepe02g2147 Hepe-Chr2:58113966 Hepe07g0909 Hepe-Chr7:11761970 5.20e-57 wgd
Hepe05g0884 Hepe-Chr5:28373986 Hepe07g0909 Hepe-Chr7:11761970 1.16e-20 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72934 PF00069 Pkinase 2.80E-46 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g0909 - - - 0.0