Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g0919 ATGAGCAAATTAGAAGAGTTGGTCTTGTTGGATATGCGGGTGAGCCCTTTTGCCACAAGAGTGAGGATAGCTTTAGCAGAGAAGCGCTTAAAATATGCCACAAAAGAGGAAGATTTGAGCAACAAAAGTCCTTTACTTTTGGAGATGAACCCTTTTTACAAACAAATTCCAGTTTTGATTCACAAAGGGAAGCCCATTATTGATTCAGTTGTTATAGTTGAATATATTGATGAGATTTGGAGTGATGAAGGAACTTATGCTAATTTGCTTCCTTCTCATCCTTATGAGAGGGCACATGCTAGGTTTTGGGCTGACTATGTGGACAAGAAGATTTATCCCAATGGAAGTAAGCTATGGAATAGAGAAAAGACAGAAGAAGAGAAAGAAGCAGCAATGAAGGAACTGTTAGAGAGCTTTAAGCAGCTAGAAGAAGAGCTTGGAGAAAAGCCCTATTTTGGGGGACAAAGATTTGGGCTTATAGATATTGCTCTCATTCCATTTTACACCATGTTTTTTGCATTCAAATTGCTTGGAAAATTGGACATAGAAGCTGAATGTCCCAAGATCCTTCAATGGGTTAAAAAGTGCAACCAAAGAGAGAGTGTCTCAAAGAATTTGCCTACTCAACAAGAGGTTTACGATGTCCTTTTGAAAATCCTAGGAGTTGAGCATATTATTGAGTAA 684 38.3 MSKLEELVLLDMRVSPFATRVRIALAEKRLKYATKEEDLSNKSPLLLEMNPFYKQIPVLIHKGKPIIDSVVIVEYIDEIWSDEGTYANLLPSHPYERAHARFWADYVDKKIYPNGSKLWNREKTEEEKEAAMKELLESFKQLEEELGEKPYFGGQRFGLIDIALIPFYTMFFAFKLLGKLDIEAECPKILQWVKKCNQRESVSKNLPTQQEVYDVLLKILGVEHIIE 227
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 11985192 11986608 - Hsped.07g09190.1 Hepe07g0919 574314

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g0919 227 Coils Coil 121 145 - -
Hepe07g0919 227 Gene3D Glutaredoxin 4 92 - -
Hepe07g0919 227 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 5 84 IPR004045 -
Hepe07g0919 227 Pfam Glutathione S-transferase, N-terminal domain 7 78 IPR004045 -
Hepe07g0919 227 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 93 215 IPR010987 -
Hepe07g0919 227 SFLD Main.3: Omega- and Tau-like 5 215 IPR045073 -
Hepe07g0919 227 SUPERFAMILY GST C-terminal domain-like 79 219 IPR036282 -
Hepe07g0919 227 CDD GST_N_Tau 7 80 - -
Hepe07g0919 227 FunFam Tau class glutathione S-transferase 1 88 - -
Hepe07g0919 227 Pfam Glutathione S-transferase, C-terminal domain 119 200 IPR004046 -
Hepe07g0919 227 SUPERFAMILY Thioredoxin-like 7 112 IPR036249 -
Hepe07g0919 227 Gene3D - 93 223 - -
Hepe07g0919 227 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 8 215 IPR045073 GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)
Hepe07g0919 227 SFLD Main (cytGST) 5 215 - -
Hepe07g0919 227 CDD GST_C_Tau 94 219 IPR045074 GO:0004364(InterPro)|GO:0006749(InterPro)
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g0919 K00799 - - rcu:8274525 271.552
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe07g0919 Hepe-Chr7:11985192 Hepe07g0921 Hepe-Chr7:12007015 1.82e-78 dispersed
Hepe07g0916 Hepe-Chr7:11967514 Hepe07g0919 Hepe-Chr7:11985192 9.17e-79 proximal
Hepe07g0919 Hepe-Chr7:11985192 Hepe07g0920 Hepe-Chr7:11994106 3.79e-77 tandem
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Hepe03g1913 . 1 209 Glutathione S-transferase Gene Family AT4G02520 58.0 8.4e-65 243.8
Hepe03g1912 . 1 209 Glutathione S-transferase Gene Family AT4G02520 58.0 3.2e-64 241.9
Hepe03g1912 . 1 210 Glutathione S-transferase Gene Family AT2G02930 59.2 8.4e-65 243.8
Hepe03g1913 . 1 210 Glutathione S-transferase Gene Family AT2G02930 57.7 1.9e-64 242.7
Hepe03g1913 . 5 206 Glutathione S-transferase Gene Family AT1G02950 55.7 3.2e-63 238.8
Hepe03g1912 . 5 206 Glutathione S-transferase Gene Family AT1G02950 54.2 1.2e-57 220.3
Hepe03g1912 . 1 210 Glutathione S-transferase Gene Family AT1G02930 58.6 1.1e-64 243.4
Hepe03g1913 . 1 210 Glutathione S-transferase Gene Family AT1G02930 54.3 2.2e-62 235.7
Hepe03g1912 . 1 210 Glutathione S-transferase Gene Family AT1G02920 59.5 7.5e-66 247.3
Hepe03g1913 . 1 210 Glutathione S-transferase Gene Family AT1G02920 55.2 1.2e-63 240.0
Hepe03g1913 . 1 213 Glutathione S-transferase Gene Family AT2G47730 57.5 1.1e-66 250.4
Hepe03g1912 . 1 213 Glutathione S-transferase Gene Family AT2G47730 58.4 9.4e-66 247.3
Hepe03g1914 . 33 191 Glutathione S-transferase Gene Family AT3G62760 64.2 3.2e-59 225.3
Hepe04g0798 . 4 214 Glutathione S-transferase Gene Family AT2G29420 50.2 1.4e-62 236.5
Hepe04g0799 . 2 206 Glutathione S-transferase Gene Family AT2G29420 51.2 2.3e-60 229.2
Hepe04g0807 . 401 609 Glutathione S-transferase Gene Family AT3G09270 56.7 4.7e-66 248.1
Hepe04g0798 . 3 215 Glutathione S-transferase Gene Family AT3G09270 53.5 9.8e-64 240.4
Hepe04g0799 . 3 208 Glutathione S-transferase Gene Family AT3G09270 54.1 3.7e-63 238.4
Hepe04g0805 . 3 213 Glutathione S-transferase Gene Family AT3G09270 53.3 1.2e-61 233.4
Hepe07g0916 . 1 217 Glutathione S-transferase Gene Family AT1G78380 68.2 3.1e-86 315.1
Hepe07g0920 . 9 221 Glutathione S-transferase Gene Family AT1G78380 68.1 2.1e-82 302.4
Hepe07g0921 . 1 203 Glutathione S-transferase Gene Family AT1G78380 65.0 9.2e-75 276.9
Hepe02g2416 . 5 222 Glutathione S-transferase Gene Family AT1G78380 54.1 1.1e-64 243.4
Hepe07g0919 . 5 216 Glutathione S-transferase Gene Family AT1G78380 52.8 2.9e-60 228.8
Hepe06g0180 . 212 315 Glutathione S-transferase Gene Family AT1G78380 73.1 5.7e-40 161.4
Hepe07g0920 . 14 221 Glutathione S-transferase Gene Family AT1G78370 63.9 1.7e-76 282.7
Hepe07g0916 . 7 215 Glutathione S-transferase Gene Family AT1G78370 60.8 1.1e-72 270.0
Hepe07g0921 . 1 203 Glutathione S-transferase Gene Family AT1G78370 64.0 4.0e-70 261.5
Hepe02g2416 . 8 221 Glutathione S-transferase Gene Family AT1G78370 52.3 1.2e-61 233.4
Hepe07g0916 . 1 217 Glutathione S-transferase Gene Family AT1G78340 63.1 8.0e-79 290.4
Hepe07g0920 . 9 221 Glutathione S-transferase Gene Family AT1G78340 60.1 4.6e-74 274.6
Hepe07g0921 . 2 204 Glutathione S-transferase Gene Family AT1G78340 60.1 2.6e-69 258.8
Hepe02g2416 . 5 220 Glutathione S-transferase Gene Family AT1G78340 52.3 3.1e-62 235.3
Hepe05g1844 . 9 161 Glutathione S-transferase Gene Family AT1G78340 50.6 5.6e-40 161.4
Hepe06g0180 . 212 315 Glutathione S-transferase Gene Family AT1G78340 68.3 1.4e-38 156.8
Hepe07g0916 . 1 215 Glutathione S-transferase Gene Family AT1G78320 50.2 1.1e-55 213.4
Hepe07g0920 . 9 225 Glutathione S-transferase Gene Family AT1G17180 65.4 7.1e-83 303.9
Hepe07g0916 . 1 220 Glutathione S-transferase Gene Family AT1G17180 61.4 1.5e-80 296.2
Hepe07g0921 . 1 208 Glutathione S-transferase Gene Family AT1G17180 63.9 1.3e-76 283.1
Hepe02g2416 . 5 225 Glutathione S-transferase Gene Family AT1G17180 52.5 1.8e-65 246.1
Hepe07g0919 . 5 223 Glutathione S-transferase Gene Family AT1G17180 50.5 4.5e-61 231.5
Hepe06g0180 . 212 318 Glutathione S-transferase Gene Family AT1G17180 67.3 1.8e-38 156.4
Hepe07g0920 . 7 224 Glutathione S-transferase Gene Family AT1G17190 59.6 5.4e-75 277.7
Hepe07g0916 . 2 218 Glutathione S-transferase Gene Family AT1G17190 56.7 5.6e-72 267.7
Hepe07g0921 . 1 206 Glutathione S-transferase Gene Family AT1G17190 56.8 1.6e-66 249.6
Hepe06g0180 . 210 315 Glutathione S-transferase Gene Family AT1G17190 67.9 3.4e-37 152.1
Hepe07g0916 . 3 215 Glutathione S-transferase Gene Family AT3G43800 57.9 6.4e-71 264.2
Hepe07g0920 . 7 221 Glutathione S-transferase Gene Family AT3G43800 53.9 9.6e-67 250.4
Hepe07g0921 . 1 204 Glutathione S-transferase Gene Family AT3G43800 54.8 1.2e-61 233.4
Hepe07g0916 . 1 220 Glutathione S-transferase Gene Family AT1G53680 55.1 1.0e-65 246.9
Hepe07g0921 . 2 208 Glutathione S-transferase Gene Family AT1G53680 56.3 6.8e-65 244.2
Hepe07g0920 . 11 225 Glutathione S-transferase Gene Family AT1G53680 54.8 3.7e-63 238.4
Hepe02g2416 . 6 225 Glutathione S-transferase Gene Family AT1G53680 54.1 6.4e-63 237.7
Hepe07g0919 . 6 223 Glutathione S-transferase Gene Family AT1G53680 50.9 8.0e-58 220.7
Hepe08g1222 . 51 221 Glutathione S-transferase Gene Family AT2G02390 66.1 4.6e-62 234.6
Hepe08g1220 . 49 215 Glutathione S-transferase Gene Family AT2G02390 67.1 5.6e-60 227.6
Hepe05g1872 . 63 201 Glutathione S-transferase Gene Family AT2G02390 52.5 1.4e-37 153.3
Hepe08g1222 . 10 220 Glutathione S-transferase Gene Family AT2G02380 64.0 2.6e-77 285.4
Hepe08g1220 . 8 214 Glutathione S-transferase Gene Family AT2G02380 62.3 8.8e-73 270.4
Hepe05g1872 . 20 201 Glutathione S-transferase Gene Family AT2G02380 52.7 5.6e-51 198.0
Hepe07g0758 . 1 237 Glutathione S-transferase Gene Family AT5G41210 68.8 5.5e-92 334.3
Hepe07g0758 . 1 237 Glutathione S-transferase Gene Family AT5G41240 67.5 1.0e-88 324.7
Hepe05g0219 . 13 232 Glutathione S-transferase Gene Family AT5G02780 67.6 1.7e-82 302.8
Hepe05g0218 . 1 203 Glutathione S-transferase Gene Family AT5G02780 68.6 3.0e-79 292.0
Hepe01g0865 . 75 294 Glutathione S-transferase Gene Family AT5G02780 64.9 1.9e-78 289.3
Hepe01g0865 . 53 299 Glutathione S-transferase Gene Family AT3G55040 63.7 4.5e-85 311.6
Hepe05g0219 . 3 230 Glutathione S-transferase Gene Family AT3G55040 56.3 3.2e-75 278.9
Hepe05g0218 . 1 201 Glutathione S-transferase Gene Family AT3G55040 63.2 4.0e-73 271.9
Hepe05g0219 . 7 232 Glutathione S-transferase Gene Family AT5G02790 68.3 2.3e-87 318.9
Hepe05g0218 . 2 203 Glutathione S-transferase Gene Family AT5G02790 72.8 1.1e-86 316.6
Hepe01g0865 . 67 294 Glutathione S-transferase Gene Family AT5G02790 63.3 2.9e-82 302.0
Hepe02g0994 . 59 266 Glutathione S-transferase Gene Family AT1G19570 58.9 3.2e-72 268.5
Hepe01g0844 . 1 98 Glutathione S-transferase Gene Family AT1G19570 75.5 8.5e-41 164.1
Hepe01g0842 . 1 101 Glutathione S-transferase Gene Family AT1G19570 73.5 4.2e-40 161.8
Hepe02g0994 . 59 266 Glutathione S-transferase Gene Family AT1G75270 61.7 9.0e-75 276.9
Hepe01g0844 . 1 98 Glutathione S-transferase Gene Family AT1G75270 80.6 1.8e-43 172.9
Hepe01g0842 . 1 101 Glutathione S-transferase Gene Family AT1G75270 75.5 8.5e-41 164.1
Hepe02g0994 . 48 268 Glutathione S-transferase Gene Family AT5G16710 76.0 8.0e-102 367.1
Hepe01g1586 . 1 267 Glutathione S-transferase Gene Family AT1G77290 69.3 1.6e-108 389.4
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000291 5 5 16 3 3 4 0 3 4 5 2 4 5 4 5 5 4 4 3 4 3 8 4 5 5 8 2 4 1 17 145