Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g0919 ATGAGCAAATTAGAAGAGTTGGTCTTGTTGGATATGCGGGTGAGCCCTTTTGCCACAAGAGTGAGGATAGCTTTAGCAGAGAAGCGCTTAAAATATGCCACAAAAGAGGAAGATTTGAGCAACAAAAGTCCTTTACTTTTGGAGATGAACCCTTTTTACAAACAAATTCCAGTTTTGATTCACAAAGGGAAGCCCATTATTGATTCAGTTGTTATAGTTGAATATATTGATGAGATTTGGAGTGATGAAGGAACTTATGCTAATTTGCTTCCTTCTCATCCTTATGAGAGGGCACATGCTAGGTTTTGGGCTGACTATGTGGACAAGAAGATTTATCCCAATGGAAGTAAGCTATGGAATAGAGAAAAGACAGAAGAAGAGAAAGAAGCAGCAATGAAGGAACTGTTAGAGAGCTTTAAGCAGCTAGAAGAAGAGCTTGGAGAAAAGCCCTATTTTGGGGGACAAAGATTTGGGCTTATAGATATTGCTCTCATTCCATTTTACACCATGTTTTTTGCATTCAAATTGCTTGGAAAATTGGACATAGAAGCTGAATGTCCCAAGATCCTTCAATGGGTTAAAAAGTGCAACCAAAGAGAGAGTGTCTCAAAGAATTTGCCTACTCAACAAGAGGTTTACGATGTCCTTTTGAAAATCCTAGGAGTTGAGCATATTATTGAGTAA 684 38.3 MSKLEELVLLDMRVSPFATRVRIALAEKRLKYATKEEDLSNKSPLLLEMNPFYKQIPVLIHKGKPIIDSVVIVEYIDEIWSDEGTYANLLPSHPYERAHARFWADYVDKKIYPNGSKLWNREKTEEEKEAAMKELLESFKQLEEELGEKPYFGGQRFGLIDIALIPFYTMFFAFKLLGKLDIEAECPKILQWVKKCNQRESVSKNLPTQQEVYDVLLKILGVEHIIE 227
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 11985192 11986608 - Hsped.07g09190.1 Hepe07g0919 574314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g0919 227 Coils Coil 121 145 - -
Hepe07g0919 227 Gene3D Glutaredoxin 4 92 - -
Hepe07g0919 227 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 5 84 IPR004045 -
Hepe07g0919 227 Pfam Glutathione S-transferase, N-terminal domain 7 78 IPR004045 -
Hepe07g0919 227 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 93 215 IPR010987 -
Hepe07g0919 227 SFLD Main.3: Omega- and Tau-like 5 215 IPR045073 -
Hepe07g0919 227 SUPERFAMILY GST C-terminal domain-like 79 219 IPR036282 -
Hepe07g0919 227 CDD GST_N_Tau 7 80 - -
Hepe07g0919 227 FunFam Tau class glutathione S-transferase 1 88 - -
Hepe07g0919 227 Pfam Glutathione S-transferase, C-terminal domain 119 200 IPR004046 -
Hepe07g0919 227 SUPERFAMILY Thioredoxin-like 7 112 IPR036249 -
Hepe07g0919 227 Gene3D - 93 223 - -
Hepe07g0919 227 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 8 215 IPR045073 GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)
Hepe07g0919 227 SFLD Main (cytGST) 5 215 - -
Hepe07g0919 227 CDD GST_C_Tau 94 219 IPR045074 GO:0004364(InterPro)|GO:0006749(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe07g0919 Hepe-Chr7:11985192 Hepe07g0921 Hepe-Chr7:12007015 1.82e-78 dispersed
Hepe07g0916 Hepe-Chr7:11967514 Hepe07g0919 Hepe-Chr7:11985192 9.17e-79 proximal
Hepe07g0919 Hepe-Chr7:11985192 Hepe07g0920 Hepe-Chr7:11994106 3.79e-77 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g0919 K00799 - rcu:8274525 271.552