Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g0957 ATGAAGATTCAGTGCAATGTCTGCGAGATGGCTGAGGCGACCGTACTCTGTTGTGCTGATGAGGCGGCGCTGTGCTGGGCCTGCGACGAGAAGATTCATGCTGCCAACAAGCTCGCAAGCAAACACCAGAGAGTTCCTCTCTCTGGTTCTTCATCCCAGATGCCCAAATGTGACATATGTCAGGAAGCTAGTGGCTACATCTTCTGTTTAGAGGATCGGGCATTACTTTGCAGAAAGTGTGATGTTGCTATACACACAGCAAATACTTATGTAACTGGTCATCAGCGCTTTCTGCTTACTGGTGTGAAAGTGGCACTTGAGCCAACTGACCCTGTTGCTTGTTCTTCCATGGCTAAGTCATATTCTAGAGAGAAATCTATTGAGACGAAAGTTAGACCATTGCCTGAAAGGGAATTCTCGATGCCTTCTCCTGGCGAACTCAGCAGAACTCTGCATATACAAGGCGAATCTGAGGACTTCGTGGCAAGTAAAATGTTTCTTACCGGAGATTCTGTTTCTGGTGGCTTTTCACAATGGCAAATGGATGAACTTATTAATTTGACCGGATTCAATCATAATTATGGGTATACGGATAACGGATCATCTAAGGCTGATAGTGGTAAACTTGGGGATTCTGATTCATCACCAGTTTTGAGAGCTGGTGATGTCGAACTGGACGATGACGATGAGTGCTCGGGTCAGGTTCCAGAGGCTTCCTGGACTGTGCCTCAGATTCCCTCCCCACCCACAGCATCTGGCTTATACTGGCCAAGAAGTTACCATAATTCTATGGATGGTGCTGTTTTTGTTCCTGACATCTCCTGTTCTTCAGAAAAGGTTCGACATTGCTCACATAACGGTACATTCTCGAAACGACGGAGGCAGTTCTAG 891 46.46 MKIQCNVCEMAEATVLCCADEAALCWACDEKIHAANKLASKHQRVPLSGSSSQMPKCDICQEASGYIFCLEDRALLCRKCDVAIHTANTYVTGHQRFLLTGVKVALEPTDPVACSSMAKSYSREKSIETKVRPLPEREFSMPSPGELSRTLHIQGESEDFVASKMFLTGDSVSGGFSQWQMDELINLTGFNHNYGYTDNGSSKADSGKLGDSDSSPVLRAGDVELDDDDECSGQVPEASWTVPQIPSPPTASGLYWPRSYHNSMDGAVFVPDISCSSEKVRHCSHNGTFSKRRRQF 296
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 12812874 12816488 + Hsped.07g09570.1 Hepe07g0957 574352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g0957 296 CDD Bbox1_BBX-like 56 99 IPR049808 -
Hepe07g0957 296 MobiDBLite consensus disorder prediction 201 246 - -
Hepe07g0957 296 FunFam B-box zinc finger protein 22 1 93 - -
Hepe07g0957 296 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 276 IPR051979 GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0009640(PANTHER)
Hepe07g0957 296 CDD Bbox1_BBX-like 5 47 IPR049808 -
Hepe07g0957 296 ProSiteProfiles Zinc finger B-box type profile. 52 99 IPR000315 GO:0008270(InterPro)
Hepe07g0957 296 Gene3D Classic Zinc Finger 1 92 - -
Hepe07g0957 296 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270(InterPro)
Hepe07g0957 296 Pfam B-box zinc finger 3 47 IPR000315 GO:0008270(InterPro)
Hepe07g0957 296 Pfam B-box zinc finger 53 96 IPR000315 GO:0008270(InterPro)
Hepe07g0957 296 SMART bboxneu5 4 47 IPR000315 GO:0008270(InterPro)
Hepe07g0957 296 SMART bboxneu5 52 99 IPR000315 GO:0008270(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0478 Hepe-Chr2:4666861 Hepe07g0957 Hepe-Chr7:12812874 7.33e-36 dispersed
Hepe03g1068 Hepe-Chr3:60426425 Hepe07g0957 Hepe-Chr7:12812874 2.43e-41 dispersed
Hepe07g0738 Hepe-Chr7:8820933 Hepe07g0957 Hepe-Chr7:12812874 4.76e-24 dispersed
Hepe07g0957 Hepe-Chr7:12812874 Hepe10g0125 Hepe-Chr10:1269043 5.34e-34 dispersed
Hepe07g0957 Hepe-Chr7:12812874 Hepe01g1643 Hepe-Chr1:81637092 1.88e-36 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
55959 PF00643 zf-B_box 3.60E-07 No_clan Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g0957 - - - 0.0