Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g0962 ATGGATTTTCCAACTTCTCTCTTCACGATTCATCTCCGCCTTCTTCTTTTCTCGATTTTGCTTTTCCATGGATTTCGATCCCACGCTCAGCTTTTGCCCCAAACCGAAGTGAAAACCCTTCAAACAATATCTTCAAAACTAAAGAATCTAAGCTGGAATGTTACCCAGAGTTCTTGCATTCAAGGTGAAGGCTTTTCCAATGAAGCTTTTCTGGGAAACCAAATCTTGAGGAATGTCTCTTGCAATTGTACTTCCACTGTTTGTCATGTGACAATCATCCTGCTTAAGGGTCTCAATATAACAGGAACTTTTCCAGCTGAATTTGGTAATCTTACTCATCTGCAGGAACTTGATCTTACTCGCAACCATATTAATGGGCAACTACCCACTAGTCTTGCCAATGTTCCTCTTGTCAAACTATCTCTCTTGGGAAACAGGCTAAACGGTTCAATTCCGAAGGAAATTGGTGACATTAGCACCCTTGAAGAGCTGGTCTTGGAAGACAACCAGCTAACTGGAAATCTACCTGCCAGCCTTGGAAATCTGAATCGTTTGAGTAGACTGCTTCTGTCTGCAAACAATTTCACAGGAAAAATACCAGACTCGTTTGGAAAATTAAAGAACTTGGTTGATTTTAGGATAGATGGGAATGGACTGTCTGGGAAGATTCCTGAATTAATTGGGAATTGGATCAACCTTGACAGACTGGATATTCAAGGAACATCGATGGAAAACCCCATTCCTTCTACAATATCTCAATTGAAGAATCTAACTCAATTGAGGATATCTGATTTGAAGGGATCATTTATAAGTTTCCCCAATTTGACAGATATGATAAATATGGAAGAATTGGTCCTGAGGAACTGTTTAATTAATGGTTCCATTCCTTCGTATATTGGAGAAATGAATAAATTATCAACTCTAGATCTAAGCTTCAACCATTTAACTGGTCCAATTCCTGAGACATTTCAGAATCTGATGAAGAAAAAGATTGACTTCATGTTTCTGACAAACAACTCACTGAGTGGGGAAGTGCCAGGTTGGATCTTGAGGAGCAAAAAGAACATAGACTTGTCATACAACAGTTTTACCGGGTCTACTCTTGCTAGTTGCACACAATCACCTGTGAACTTGATAGCCAGTTACCCACCTGCAGCGAATCAAGTTCCTTGGTGCCTCAGGAAGGACCTTCCATGCTCTGGAAAAGCTGAACATTATTCCTTGTTTATTAATTGTGGAGGAACCAGATTGAGGGCTGATGGCCAGGATTATGAAGAGGACTTAACTACAGAAGGCAAGTCAAACTTCTTTTCTGTTTCAGAAAAATGGGCTTATAGCAGTACAGGAGTTTTTTTGGGTGATGAAAGTGCCGACTACTTGGCTACAAATAAGTTTGGCCTGAATGTGAGTGGTCCGCACTATTATCAAAATGCCCGACTTTCCCCTCTCTCCCTCAAATATTATGGTCTTTGCCTGCGTAGCGGAAGCTATAATGTGAAGCTCCACTTTGCTGAAATTATGTACTCTAATGATCAAACTTTTAGCAGCCTGGGGAAGCGTATATTCGATATATCAATTCAAGGAAAACTTGCTAAGAAGGATTTCAATATTGTGGAGGCAGCTGGAGGTGTTGGTAAGAACTTCACAGTGGAAGACAAAAATGTTCTTGTCAATGGCAGTACCCTTGAGATTCATCTATATTGGGCTGGTAAAGGAACTACAGCTGTGCCAGACAGAGGAGTTTATGGACCCCTTATTTCTGCTATCACAGTTACACCAAACTTTGAAGTCGACGAGGGAGGAGGACTATCGGCTGGAGCACTTGCCGGCATCATAATTTCTTCATGTGCAGTAGTCATCATATTGGTCGTTGTAATTCTTTGGATGAAAGGTTGCATATGTAAGAAGGAAGTCCTAGATAATGAACTTTCTGGCGTAGATTTACAAACGGGTCATTTTACCTTGAAACAAATTAAAGCTGCCACCAACAACTTTGATCTTAAAAGTAAAATAGGCGAAGGTGGATTTGGGCCTGTCTACAAGGGTGTATTGTCAGATGGTGCTTTGATTGCCGTGAAGCAACTCTCCTCGAAATCGAAGCAAGGGAGCCGTGAGTTTGTCACTGAGATTGGAATGATATCTGCATTGCAACACCCAAACCTCGTTAAGCTCTTTGGTTGTTGCGTCGAGGGAAACCAAATGTTGCTTGTATATGAATACATGGAAAACAATAGTCTTGCCCGTGCGCTTTTTGGCCGAGAAGAACAAAGGCTACACCTCGATTGGCGAACAAGGAAGAAGATATGCTTGGAGATAGCTAGGGGATTAGCTTACCTTCATGAAGAATCAATGTTGAAAATTGTTCATAGAGACATAAAGGCCACAAATGTGCTGCTGGATAAAGATCTTAATGCTAAGATTTCTGACTTTGGTTTGGCTAAGCTTGATGAAGAGGAGAACACCCACATCAGCACACGAATTGCTGGAACCATAGGTTATATGGCACCGGAGTATGCAATGAGAGGATACTTGACTGATAAGGCAGATGTTTATAGCTTTGGAGTTGTTGCCTTAGAGATAGTTAGTGGAAAAAGTAACACGAATTACAGGCCAAAGGAAGAGTTCGTCTATCTTCTTGATTGGGCCTATGTACTGGAAGAGCAGGGTAACCTTCTAGAACTGGTAGATCCAGACCTTGGTTCAAATTACTCATCAGAGGAAGCAATGAGGATGCTGAACATAGCTCTCTTATGCACCAACCCATCTCCCACTCTCAGACCAGCCATGTCTTCTGTGGTGAGTATGCTTGAAGGTAAGATTGCAGTCCAAGCACCGATCATCAAGCGCACTTCGTCAGGCCAAGATCCGAGGTTTAGAGCCTTCGAGAAGGTCTCCCACGACAGCAGATCGCAGATTTCAAGCTCAACGTTTTCACAAGATGCTGAGCCTCAAAAGAGCATGTTGATGGATGGGCCATGTACTGATTCTTCAGTATCCAATGTCAGCAATGCCAACAATCTCTACCATTCTGCATCGAGCGATCCCCTCGAAAATCATCGTCGTGTTGATGATATGAAACCGTCAGCTAAGTAG 3093 42.03 MDFPTSLFTIHLRLLLFSILLFHGFRSHAQLLPQTEVKTLQTISSKLKNLSWNVTQSSCIQGEGFSNEAFLGNQILRNVSCNCTSTVCHVTIILLKGLNITGTFPAEFGNLTHLQELDLTRNHINGQLPTSLANVPLVKLSLLGNRLNGSIPKEIGDISTLEELVLEDNQLTGNLPASLGNLNRLSRLLLSANNFTGKIPDSFGKLKNLVDFRIDGNGLSGKIPELIGNWINLDRLDIQGTSMENPIPSTISQLKNLTQLRISDLKGSFISFPNLTDMINMEELVLRNCLINGSIPSYIGEMNKLSTLDLSFNHLTGPIPETFQNLMKKKIDFMFLTNNSLSGEVPGWILRSKKNIDLSYNSFTGSTLASCTQSPVNLIASYPPAANQVPWCLRKDLPCSGKAEHYSLFINCGGTRLRADGQDYEEDLTTEGKSNFFSVSEKWAYSSTGVFLGDESADYLATNKFGLNVSGPHYYQNARLSPLSLKYYGLCLRSGSYNVKLHFAEIMYSNDQTFSSLGKRIFDISIQGKLAKKDFNIVEAAGGVGKNFTVEDKNVLVNGSTLEIHLYWAGKGTTAVPDRGVYGPLISAITVTPNFEVDEGGGLSAGALAGIIISSCAVVIILVVVILWMKGCICKKEVLDNELSGVDLQTGHFTLKQIKAATNNFDLKSKIGEGGFGPVYKGVLSDGALIAVKQLSSKSKQGSREFVTEIGMISALQHPNLVKLFGCCVEGNQMLLVYEYMENNSLARALFGREEQRLHLDWRTRKKICLEIARGLAYLHEESMLKIVHRDIKATNVLLDKDLNAKISDFGLAKLDEEENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVALEIVSGKSNTNYRPKEEFVYLLDWAYVLEEQGNLLELVDPDLGSNYSSEEAMRMLNIALLCTNPSPTLRPAMSSVVSMLEGKIAVQAPIIKRTSSGQDPRFRAFEKVSHDSRSQISSSTFSQDAEPQKSMLMDGPCTDSSVSNVSNANNLYHSASSDPLENHRRVDDMKPSAK 1030
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 12912952 12936305 + Hsped.07g09620.1 Hepe07g0962 574357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g0962 1030 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 405 594 - -
Hepe07g0962 1030 Gene3D Phosphorylase Kinase; domain 1 632 740 - -
Hepe07g0962 1030 Pfam Leucine Rich Repeat 113 134 IPR001611 GO:0005515(InterPro)
Hepe07g0962 1030 Pfam Leucine Rich Repeat 304 326 IPR001611 GO:0005515(InterPro)
Hepe07g0962 1030 Pfam Leucine Rich Repeat 161 182 IPR001611 GO:0005515(InterPro)
Hepe07g0962 1030 Pfam Leucine Rich Repeat 185 206 IPR001611 GO:0005515(InterPro)
Hepe07g0962 1030 SMART serkin_6 665 934 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g0962 1030 ProSiteProfiles Protein kinase domain profile. 665 947 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g0962 1030 Gene3D Ribonuclease Inhibitor 250 387 IPR032675 -
Hepe07g0962 1030 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 634 740 - -
Hepe07g0962 1030 Gene3D - 402 594 - -
Hepe07g0962 1030 MobiDBLite consensus disorder prediction 963 1030 - -
Hepe07g0962 1030 SUPERFAMILY L domain-like 73 326 - -
Hepe07g0962 1030 CDD STKc_IRAK 671 938 - -
Hepe07g0962 1030 Gene3D Transferase(Phosphotransferase) domain 1 741 948 - -
Hepe07g0962 1030 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 273 367 - -
Hepe07g0962 1030 SUPERFAMILY Protein kinase-like (PK-like) 648 951 IPR011009 -
Hepe07g0962 1030 FunFam Putative LRR receptor-like serine/threonine-protein kinase 741 948 - -
Hepe07g0962 1030 Pfam Malectin domain 407 589 IPR021720 -
Hepe07g0962 1030 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 15 962 IPR051824 -
Hepe07g0962 1030 MobiDBLite consensus disorder prediction 967 983 - -
Hepe07g0962 1030 MobiDBLite consensus disorder prediction 990 1013 - -
Hepe07g0962 1030 ProSitePatterns Serine/Threonine protein kinases active-site signature. 787 799 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe07g0962 1030 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g53440 36 198 - -
Hepe07g0962 1030 Gene3D Ribonuclease Inhibitor 12 249 IPR032675 -
Hepe07g0962 1030 Pfam Protein tyrosine and serine/threonine kinase 667 934 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe07g0962 1030 MobiDBLite consensus disorder prediction 1014 1030 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g1459 Hepe-Chr1:79824025 Hepe07g0962 Hepe-Chr7:12912952 4.65e-281 dispersed
Hepe01g1460 Hepe-Chr1:79842354 Hepe07g0962 Hepe-Chr7:12912952 2.16e-297 dispersed
Hepe02g0026 Hepe-Chr2:394914 Hepe07g0962 Hepe-Chr7:12912952 5.95e-70 dispersed
Hepe02g0061 Hepe-Chr2:705993 Hepe07g0962 Hepe-Chr7:12912952 2.82e-251 dispersed
Hepe02g2147 Hepe-Chr2:58113966 Hepe07g0962 Hepe-Chr7:12912952 4.87e-96 dispersed
Hepe07g0962 Hepe-Chr7:12912952 Hepe07g1830 Hepe-Chr7:61087546 5.61e-221 dispersed
Hepe01g1457 Hepe-Chr1:79791418 Hepe07g0962 Hepe-Chr7:12912952 1.04e-199 wgd
Hepe02g0134 Hepe-Chr2:1493036 Hepe07g0962 Hepe-Chr7:12912952 1.29e-58 wgd
Hepe04g0052 Hepe-Chr4:21615158 Hepe07g0962 Hepe-Chr7:12912952 4.80e-10 wgd
Hepe06g0588 Hepe-Chr6:43230643 Hepe07g0962 Hepe-Chr7:12912952 8.91e-66 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72937 PF07714 PK_Tyr_Ser-Thr 1.90E-49 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g0962 - - - 0.0