Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g0964 ATGACGTCGGGGACGAGGCTACCGACATGGAGGGAGCGGGAGAACAACAAGAGAAGGGAGAGAAGGAGAAGAGCTATTGCCGCAAAGATCTTTTCTGGACTTAGGATGTATGGGAACTACAAGCTTCCCAAGCATTGCGATAACAATGAAGTCCTTAAAGCTCTCTGCAATGAAGCTGGATGGAGCGTCGAACCTGATGGTACCACTTACCGTAAGGGATGCAGGCCAATTGAACGTATGGATGTGGTTGGTGGATCGGCAGCTGCAAGCCCGTACGCATCTCACCAACCAAGTCCTTGTGCTTCCTTCAATCCAAGCCCCGGCTCATCTTCTTTTCCAAGTCCAGCATCATCCTCATATGTTGCTAATCCGAATGCCGACGGCAGTTCACTTATCCCGTGGCTCAAAAACCTTTCATCTTCATCATCTTCAGCATCCTCATCTAAACTCCCCAATCTCTATATTCATGGAGGTTCCATCAGTGCTCCTGTTACTCCTCCTCTGAGTTCCCCAACTGCTAGAACACCGCGACTCAAAGCCGACTGGGAAGAGCAGCCGGTCCTGCCGGGATGGAGTGCTGCACACTACTACTCCTCCCAGCCATCGTCTACTCCACCAAGTCCTGGGCGTCAGATTGTTCCCAATCCAGAATGGTTTGCTGGCCTCAGAATTCCTCAGGGTGGACCCAATTCTCCAACATTTAGTCTTGTTTCTACAAACCCATTTGGTAATAATTTCAAGGAAGCACCAATAATGACTGGTGGAGGATCTCGGATGTGGACCCCTGGTCAAAGTGGGACCTGCTCCCCTGCCATTGCAGCAGGCTCCGATCACAATGCAGATATTCCAATGTCAGAAGTGATTTCTGATGAGTTCGCATTTGGAAGCAATGCAGCGGGAATAGTGAAGCCATGGGAAGGAGAACGAATTCATGAAGAATGTGGTTCAGATGACCTAGAGCTCACTCTTGGGAACTCAAGAACCAGGTAA 990 49.8 MTSGTRLPTWRERENNKRRERRRRAIAAKIFSGLRMYGNYKLPKHCDNNEVLKALCNEAGWSVEPDGTTYRKGCRPIERMDVVGGSAAASPYASHQPSPCASFNPSPGSSSFPSPASSSYVANPNADGSSLIPWLKNLSSSSSSASSSKLPNLYIHGGSISAPVTPPLSSPTARTPRLKADWEEQPVLPGWSAAHYYSSQPSSTPPSPGRQIVPNPEWFAGLRIPQGGPNSPTFSLVSTNPFGNNFKEAPIMTGGGSRMWTPGQSGTCSPAIAAGSDHNADIPMSEVISDEFAFGSNAAGIVKPWEGERIHEECGSDDLELTLGNSRTR 329
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 12953406 12957031 - Hsped.07g09640.1 Hepe07g0964 574359

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g0964 329 MobiDBLite consensus disorder prediction 88 120 - -
Hepe07g0964 329 MobiDBLite consensus disorder prediction 91 120 - -
Hepe07g0964 329 MobiDBLite consensus disorder prediction 1 20 - -
Hepe07g0964 329 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 1 329 IPR033264 GO:0003700(InterPro)|GO:0006351(InterPro)|GO:0009742(InterPro)
Hepe07g0964 329 Pfam BES1/BZR1 plant transcription factor, N-terminal 4 139 IPR008540 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g0964 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe07g0964 Hepe-Chr7:12953406 Hepe07g1834 Hepe-Chr7:61122013 6.17e-139 dispersed
Hepe07g0964 Hepe-Chr7:12953406 Hepe04g1483 Hepe-Chr4:70471002 3.98e-61 transposed
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Hepe10g0663 . 1 310 BZR Transcription Factor Family AT1G75080 58.2 1.0e-85 313.9
Hepe04g1483 . 28 321 BZR Transcription Factor Family AT1G75080 58.6 1.3e-80 297.0
Hepe10g0663 . 1 311 BZR Transcription Factor Family AT1G19350 58.8 1.8e-85 313.2
Hepe04g1483 . 28 319 BZR Transcription Factor Family AT1G19350 58.6 1.4e-77 287.0
Hepe04g1483 . 6 321 BZR Transcription Factor Family AT3G50750 57.2 2.5e-77 285.8
Hepe10g0663 . 1 307 BZR Transcription Factor Family AT3G50750 52.1 1.1e-61 233.8
Hepe07g1834 . 82 330 BZR Transcription Factor Family AT4G18890 54.1 2.6e-50 195.7
Hepe07g0964 . 77 329 BZR Transcription Factor Family AT4G18890 52.3 3.4e-50 195.3
Hepe07g0964 . 1 329 BZR Transcription Factor Family AT1G78700 72.4 1.4e-114 409.8
Hepe07g1834 . 5 330 BZR Transcription Factor Family AT1G78700 67.1 2.7e-99 359.0
Hepe04g1483 . 28 200 BZR Transcription Factor Family AT4G36780 77.4 4.4e-63 238.4
Hepe10g0663 . 33 204 BZR Transcription Factor Family AT4G36780 59.6 1.2e-41 167.2
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000940 3 4 6 4 3 2 4 2 2 2 2 2 4 2 2 4 2 3 4 2 2 2 2 2 2 2 2 6 3 3 85
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
55960 PF05687 BES1_N 8.00E-65 No_clan Hepe TF