Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g0984 ATGACTTGTTTCTATTTTTGTTCAAGAAGGAACAAAGATTCATCGGCTGCACAAACAGCAACGGCAGTCGAAGAGATTTCAAATATTCCGAGCGTTCGCTTGTACTCATACGAAGAACTTAGAAAAGCAACTGAAAATTTCAGGTCTGAAAATAAACTTGGACAGGGAGGCTTTGGATCTGTCTACAAGGGAAGGCTCAGAGATGGAACTCTGGCTGCCATAAAGGTACTATCCGTGGATTCAAGCCAAGGGACACGGGAGTTTTTGTCAGAAATCAATGTGATTACAGTTATAAACCATGATAACCTGGTTAAGTTGCATGGTTGTTGTGTGGAAGGGAAGCACCGGATCTTGGTCTATCCTTTCCTAGAAAATAACAGCCTCGACAGGACGCTTCTTGGTAGAAGACATGGAAATATCCAATTCAATTGGCAAACGAGGTGTAAAATATGCATTGGGATTGCACGGGGGCTCGCATTTCTTCATGAGGAAGTTCAGCCACATGTTATCCACAGGGACATCAAAGCAAGCAATATCCTGCTTGATAAGGACTTATCCCCAAAAATTTCTGATTTTGGACTTGCTAGACTACTTCCTGCTCATTTGACCCACATTAGTACACGTATTGCCGGGACAGCAGGTTATCTTGCACCTGAATATGCCATACGGGGGCAAGCAACGAGAAGAACAGATATTTATAGTTTTGGTGTCTTACTCTTGGAGATTGTTTGTGGGAGGTACAACATAAATAGACGGTTGTCTGCTGAAGAACCGTATCTTCTTGAAATGGTGTGGGATCATCATGAGAAAGGGCAATTGCTGGAAATGATAGACATATCATTAAATGGAGACTTTGAGGCTGAGGCCTGCAGATATTTAAAAGTCGGTCTTCTCTGCACCCAAGATATGCCAAAACTCCGGCCATCTATGTCGACCGTCGTCAAGATGCTAACAGGTGACATTGATATATCGGATCAAACAATATCTAGACCAGGAATGCTTTCAGAGTTCATGCTTCGAAAGGATGTACTAGGCAAGAAAGGCGAGTCTGATTCGAAGCTTGCATCAACAACTGAAGACTCCGGAAAACCAATTGATTCAACTACATCATCCGGATTCATGGACACCTCATATGGTACCATAACCTTCAATTCGATATATGATCGTAGTAACTGA 1176 42.52 MTCFYFCSRRNKDSSAAQTATAVEEISNIPSVRLYSYEELRKATENFRSENKLGQGGFGSVYKGRLRDGTLAAIKVLSVDSSQGTREFLSEINVITVINHDNLVKLHGCCVEGKHRILVYPFLENNSLDRTLLGRRHGNIQFNWQTRCKICIGIARGLAFLHEEVQPHVIHRDIKASNILLDKDLSPKISDFGLARLLPAHLTHISTRIAGTAGYLAPEYAIRGQATRRTDIYSFGVLLLEIVCGRYNINRRLSAEEPYLLEMVWDHHEKGQLLEMIDISLNGDFEAEACRYLKVGLLCTQDMPKLRPSMSTVVKMLTGDIDISDQTISRPGMLSEFMLRKDVLGKKGESDSKLASTTEDSGKPIDSTTSSGFMDTSYGTITFNSIYDRSN 391
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 13399979 13405024 + Hsped.07g09840.1 Hepe07g0984 574379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g0984 391 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 14 350 IPR052059 GO:0004674(PANTHER)|GO:0006468(PANTHER)
Hepe07g0984 391 Pfam Protein kinase domain 48 250 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g0984 391 CDD STKc_IRAK 53 319 - -
Hepe07g0984 391 MobiDBLite consensus disorder prediction 349 369 - -
Hepe07g0984 391 ProSitePatterns Protein kinases ATP-binding region signature. 53 75 IPR017441 GO:0005524(InterPro)
Hepe07g0984 391 SUPERFAMILY Protein kinase-like (PK-like) 26 317 IPR011009 -
Hepe07g0984 391 ProSitePatterns Serine/Threonine protein kinases active-site signature. 169 181 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe07g0984 391 FunFam Putative LRR receptor-like serine/threonine-protein kinase 123 329 - -
Hepe07g0984 391 FunFam Serine/threonine-protein kinase receptor 17 122 - -
Hepe07g0984 391 Gene3D Transferase(Phosphotransferase) domain 1 123 328 - -
Hepe07g0984 391 SMART serkin_6 47 317 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g0984 391 Gene3D Phosphorylase Kinase; domain 1 17 122 - -
Hepe07g0984 391 ProSiteProfiles Protein kinase domain profile. 47 328 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe07g0909 Hepe-Chr7:11761970 Hepe07g0984 Hepe-Chr7:13399979 6.86e-166 dispersed
Hepe07g0984 Hepe-Chr7:13399979 Hepe07g1930 Hepe-Chr7:63081193 1.66e-112 dispersed
Hepe01g0190 Hepe-Chr1:30929819 Hepe07g0984 Hepe-Chr7:13399979 2.89e-61 wgd
Hepe02g2209 Hepe-Chr2:62428442 Hepe07g0984 Hepe-Chr7:13399979 1.35e-61 wgd
Hepe02g2209 Hepe-Chr2:62428442 Hepe07g0984 Hepe-Chr7:13399979 1.35e-61 wgd
Hepe02g2535 Hepe-Chr2:72261259 Hepe07g0984 Hepe-Chr7:13399979 6.49e-67 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72938 PF00069 Pkinase 2.80E-44 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g0984 - - - 0.0