Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe07g1035 ATGGGTTGCGTTTGTTGTAAGCCCTCTGCTATTGAAGATAGCAAGGAAAGTCCAAGGGAGAGGTTGTCAACTAAGACCTCCTCTGACCTACGGGTTCCAAGAGTGACTTCTTCGTCCAGGGAAGAAGCTTATCGGTCTAAAGATCAGCATGATGGTAATGATGCAAGAGTGATGCTGATTGACAAACAGGTGAATGGCTCGGGTCGACTGCAGGGTGAGAATTTTGAGAGGAAGAGGGAGAAGATGGAGCATGTGGCTGCTCAACATCCTTCCATTGGGAGAATTCCAAAGGCGGCAGAGGGAGACCACATTGCTGCAGGGTGGCCGCCGTGGCTGGCTGCAGTTGCTGGAGAGGCAATCAGAGGCTGGCTACCCCGACGAGCTGATTCCTTTGAGAAATTGGATAAAATTGGCCAAGGGACTTATAGTAATGTATATAGGGCTCGTGACCTTGACCAAAAGAAAATTGTTGCTTTGAAGAAAGTAAGGTTTGACAACCTGGAACCTGAGAGCGTCCGCTTTATGGCTAGGGAAATTCACATTTTGCGTAGACTTGATCATCCTAATGTGATAAAGCTGGAGGGTCTAGTTACATCAAGGATGTCTTGCAGCCTCTATCTTGTTTTTGAGTACATGGAACATGACTTGGCAGGACTTGCTTCACACCCTGGTGTGAAGTTTACAGAGGCGCAGGTCAAATGTTACATGCAGCAACTTTTATGTGGACTTGATCATTGTCACAGTCATGGAGTTCTACATCGTGATATAAAGGGTTCCAACCTTTTAATTGACAATAATGGCATCTTGAAAATTGCAGACTTTGGTCTAGCAAGTTTTTTTGATATCCACCAAAATCAGCCACTGACAAGTCGGGTTGTAACTCTTTGGTATCGACCACCCGAGCTTTTACTTGGTGCCACTTATTATGGTACAGCTGTAGATTTGTGGAGTACTGGCTGCATACTTGCTGAACTGTATGCTGGGAAGCCCATTATGCCTGGAAGAACGGAGGTGGAACAGTTGCATAAAATATTTAAACTCTGTGGCTCACCTTCAGAGGATTATTGGAGAAAATCAAGGTTGCCACATGCAACGATATTTAAGCCTCAACAGCCCTATAGACGTTGTGTTGCAGACACATTTAAGGATTTCCCTGCACCAGCTTTAGCTCTCATTGAGACGCTACTCTCTATAGATCCTGCTGATCGTGGCTCTGCCGATCTTGCCCTTAAAAGCGAATTCTTTTCAACAAAGCCACTTCCTTGTGATCCTTCAAGCTTGCCGAAGTATCCTCCCAGCAAAGAATTTGATGCCAAGATAAGAGATGAGGAAGCTAGAAGACAAGGAGCAGTAGGAAGCAAGGGATACCGACTTGACCTGCAAAGGAAAGATAGAGAGTCTCGAGCCGTCCCTGCACCTGATGCCAATGCCGAGTTAGCCTCATCAATGCAGAAAAGACAAGGCCAGCCCCATTCAAAGAGCCGGAGTGAGAAGTTTAACCCACATCCAGAAGAAGCTTCTGGCTTTCCAATTGATCCACCTAGACCTTCACAAGGAGCAGAAAGAATGGATTCTCAGGTGCGTCATCCTAAGAAAGCCTCACATTCAGGGCCACTTGCTCAGCGGGCCGCTTGGGCAAAGGCTAGTAAGAACCCAGATGACGCTCCCAAAATCTCAACCGGGGCAGAAACATTCGCAACATCAGGACTAGTAGCAGCTAGAAGAAGTATGCTGGCTGAAGATTGCAGGGAAAAGTCTGACTCTTCACATGGAGAGGTTCAGAAACTAATTGGCAGGTTTCCCGGTTCCTTCAAAGAAACCTCAGAGTCGTCAATGCTACCAGACCAGAAGTTCTCAAATCACAGTATTGTAGGCTCACACGAAAAAGAGAGGAGCAGCACCAAAGACCCTATAGCTGTGGGTTATGGCTCAAAGGGTCATAAGATTCATTACTCTGGTCCATTACTGGTTCCTTCTGGCAACACAGACCAAATGTTGAAGGACCACGACCGCCATATCCAAGAAGCAGTAAGACGAGCTCGGCTTGACAAGGCTAAGGCACGGAAGGTTCAAGCTGATGGGAAACAAATGTCAGCGAATTCATTATTCGTCTCCGGTCGTTAA 2124 46.61 MGCVCCKPSAIEDSKESPRERLSTKTSSDLRVPRVTSSSREEAYRSKDQHDGNDARVMLIDKQVNGSGRLQGENFERKREKMEHVAAQHPSIGRIPKAAEGDHIAAGWPPWLAAVAGEAIRGWLPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHPNVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGVKFTEAQVKCYMQQLLCGLDHCHSHGVLHRDIKGSNLLIDNNGILKIADFGLASFFDIHQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSRLPHATIFKPQQPYRRCVADTFKDFPAPALALIETLLSIDPADRGSADLALKSEFFSTKPLPCDPSSLPKYPPSKEFDAKIRDEEARRQGAVGSKGYRLDLQRKDRESRAVPAPDANAELASSMQKRQGQPHSKSRSEKFNPHPEEASGFPIDPPRPSQGAERMDSQVRHPKKASHSGPLAQRAAWAKASKNPDDAPKISTGAETFATSGLVAARRSMLAEDCREKSDSSHGEVQKLIGRFPGSFKETSESSMLPDQKFSNHSIVGSHEKERSSTKDPIAVGYGSKGHKIHYSGPLLVPSGNTDQMLKDHDRHIQEAVRRARLDKAKARKVQADGKQMSANSLFVSGR 707
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 14915394 14922932 - Hsped.07g10350.1 Hepe07g1035 574430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe07g1035 707 MobiDBLite consensus disorder prediction 35 54 - -
Hepe07g1035 707 MobiDBLite consensus disorder prediction 687 707 - -
Hepe07g1035 707 MobiDBLite consensus disorder prediction 1 54 - -
Hepe07g1035 707 Gene3D Transferase(Phosphotransferase) domain 1 214 454 - -
Hepe07g1035 707 Pfam Protein kinase domain 131 415 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g1035 707 PANTHER CELL DIVISION PROTEIN KINASE 130 415 IPR050108 GO:0000307(PANTHER)|GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0006468(PANTHER)|GO:0008353(PANTHER)|GO:0032968(PANTHER)|GO:0070816(PANTHER)
Hepe07g1035 707 Gene3D Phosphorylase Kinase; domain 1 118 213 - -
Hepe07g1035 707 FunFam probable serine/threonine-protein kinase At1g54610 214 455 - -
Hepe07g1035 707 CDD STKc_CDK9_like 131 415 - -
Hepe07g1035 707 ProSitePatterns Protein kinases ATP-binding region signature. 137 160 IPR017441 GO:0005524(InterPro)
Hepe07g1035 707 ProSitePatterns Serine/Threonine protein kinases active-site signature. 251 263 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe07g1035 707 ProSiteProfiles Protein kinase domain profile. 131 415 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g1035 707 SMART serkin_6 131 415 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe07g1035 707 MobiDBLite consensus disorder prediction 457 471 - -
Hepe07g1035 707 MobiDBLite consensus disorder prediction 12 27 - -
Hepe07g1035 707 FunFam probable serine/threonine-protein kinase At1g54610 118 213 - -
Hepe07g1035 707 SUPERFAMILY Protein kinase-like (PK-like) 125 423 IPR011009 -
Hepe07g1035 707 MobiDBLite consensus disorder prediction 442 561 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe07g1035 Hepe-Chr7:14915394 Hepe08g0545 Hepe-Chr8:4760355 3.63e-240 dispersed
Hepe08g2602 Hepe-Chr8:67857320 Hepe07g1035 Hepe-Chr7:14915394 2.00e-35 transposed
Hepe01g0154 Hepe-Chr1:26638225 Hepe07g1035 Hepe-Chr7:14915394 4.55e-232 wgd
Hepe04g0241 Hepe-Chr4:45185773 Hepe07g1035 Hepe-Chr7:14915394 2.30e-51 wgd
Hepe06g0383 Hepe-Chr6:14344402 Hepe07g1035 Hepe-Chr7:14915394 2.96e-220 wgd
Hepe07g1035 Hepe-Chr7:14915394 Hepe07g1446 Hepe-Chr7:47922444 4.56e-113 wgd
Hepe07g1035 Hepe-Chr7:14915394 Hepe09g1602 Hepe-Chr9:46187710 7.05e-199 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72940 PF00069 Pkinase 3.00E-68 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe07g1035 - - - 0.0